RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 AOX1Q06278 1338 aa14.78□□□□□ -0.04
SCAF8-203ENST00000417268 TSPY3P0CV98 308 aa14.78□□□□□ -0.04
SCAF8-203ENST00000417268 TSPY8P0CW00 308 aa14.78□□□□□ -0.04
SCAF8-203ENST00000417268 METAP2P50579 478 aaKnown RBP eCLIP14.78□□□□□ -0.04
SCAF8-203ENST00000417268 CCDC12Q8WUD4 166 aaPredicted RBP14.78□□□□□ -0.04
SCAF8-203ENST00000417268 GTPBP4Q9BZE4 634 aaKnown RBP14.78□□□□□ -0.04
SCAF8-203ENST00000417268 BMP2KQ9NSY1 1161 aaPredicted RBP14.78□□□□□ -0.04
SCAF8-203ENST00000417268 RNF123Q5XPI4 1314 aa14.78□□□□□ -0.04
SCAF8-203ENST00000417268 PREX1Q8TCU6 1659 aa14.77□□□□□ -0.04
SCAF8-203ENST00000417268 SETD1BQ9UPS6 1966 aaKnown RBP14.77□□□□□ -0.04
SCAF8-203ENST00000417268 PDE6BP35913 854 aa14.77□□□□□ -0.04
SCAF8-203ENST00000417268 FAM182BQ5T319 152 aa14.77□□□□□ -0.04
SCAF8-203ENST00000417268 BRF1Q92994 677 aa14.77□□□□□ -0.04
SCAF8-203ENST00000417268 CHMLP26374 656 aa14.77□□□□□ -0.05
SCAF8-203ENST00000417268 FAM193AP78312 1265 aa14.77□□□□□ -0.05
SCAF8-203ENST00000417268 SLC4A8Q2Y0W8 1093 aa14.77□□□□□ -0.05
SCAF8-203ENST00000417268 CFAP100Q494V2 611 aa14.77□□□□□ -0.05
SCAF8-203ENST00000417268 KRT222Q8N1A0 295 aa14.77□□□□□ -0.05
SCAF8-203ENST00000417268 SSH3Q8TE77 659 aa14.77□□□□□ -0.05
SCAF8-203ENST00000417268 USPL1Q5W0Q7 1092 aa14.76□□□□□ -0.05
SCAF8-203ENST00000417268 MIGA1Q8NAN2 632 aa14.76□□□□□ -0.05
SCAF8-203ENST00000417268 WDR66Q8TBY9 1149 aa14.76□□□□□ -0.05
SCAF8-203ENST00000417268 CUL5Q93034 780 aa14.76□□□□□ -0.05
SCAF8-203ENST00000417268 PICALMQ13492 652 aa14.76□□□□□ -0.05
SCAF8-203ENST00000417268 PROSER3Q2NL68 480 aa14.76□□□□□ -0.05
SCAF8-203ENST00000417268 SMAP1Q8IYB5 467 aaPredicted RBP14.76□□□□□ -0.05
SCAF8-203ENST00000417268 SUPT20HQ8NEM7 779 aa14.76□□□□□ -0.05
SCAF8-203ENST00000417268 HELLSQ9NRZ9 838 aa14.76□□□□□ -0.05
SCAF8-203ENST00000417268 EPS15P42566 896 aa14.76□□□□□ -0.05
SCAF8-203ENST00000417268 MCM9Q9NXL9 1143 aa14.76□□□□□ -0.05
SCAF8-203ENST00000417268 ORC3Q9UBD5 711 aaPredicted RBP14.76□□□□□ -0.05
SCAF8-203ENST00000417268 SMTNL1A8MU46 457 aa14.76□□□□□ -0.05
SCAF8-203ENST00000417268 NLRP5P59047 1200 aa14.76□□□□□ -0.05
SCAF8-203ENST00000417268 CCDC171Q6TFL3 1326 aa14.76□□□□□ -0.05
SCAF8-203ENST00000417268 KLF18A0A0U1RQI7 1052 aa14.75□□□□□ -0.05
SCAF8-203ENST00000417268 CCDC194A0A1B0GVG4 234 aa14.75□□□□□ -0.05
SCAF8-203ENST00000417268 TAF5LO75529 589 aa14.75□□□□□ -0.05
SCAF8-203ENST00000417268 STIM1Q13586 685 aa14.75□□□□□ -0.05
SCAF8-203ENST00000417268 BMS1Q14692 1282 aaKnown RBP14.75□□□□□ -0.05
SCAF8-203ENST00000417268 GIMAP6Q6P9H5 292 aa14.75□□□□□ -0.05
SCAF8-203ENST00000417268 LARP6Q9BRS8 491 aaKnown RBP14.75□□□□□ -0.05
SCAF8-203ENST00000417268 PAXBP1Q9Y5B6 917 aa14.75□□□□□ -0.05
SCAF8-203ENST00000417268 ZBTB43O43298 467 aa14.75□□□□□ -0.05
SCAF8-203ENST00000417268 NEMFO60524 1076 aa14.75□□□□□ -0.05
SCAF8-203ENST00000417268 ANO10Q9NW15 660 aa14.75□□□□□ -0.05
SCAF8-203ENST00000417268 FBXO3Q9UK99 471 aa14.75□□□□□ -0.05
SCAF8-203ENST00000417268 TECPR2O15040 1411 aa14.75□□□□□ -0.05
SCAF8-203ENST00000417268 FRMPD1Q5SYB0 1578 aa14.75□□□□□ -0.05
SCAF8-203ENST00000417268 GNAQP50148 359 aa14.74□□□□□ -0.05
SCAF8-203ENST00000417268 UBE2HP62256 183 aa14.74□□□□□ -0.05
SCAF8-203ENST00000417268 TNIP1Q15025 636 aa14.74□□□□□ -0.05
SCAF8-203ENST00000417268 IFIT1BQ5T764 474 aaKnown RBP14.74□□□□□ -0.05
SCAF8-203ENST00000417268 CEP135Q66GS9 1140 aa14.74□□□□□ -0.05
SCAF8-203ENST00000417268 DACH1Q9UI36 760 aa14.74□□□□□ -0.05
SCAF8-203ENST00000417268 BCORL1Q5H9F3 1711 aa14.74□□□□□ -0.05
SCAF8-203ENST00000417268 VEZTQ9HBM0 779 aa14.74□□□□□ -0.05
SCAF8-203ENST00000417268 JAG2Q9Y219 1238 aa14.74□□□□□ -0.05
SCAF8-203ENST00000417268 PNPLA6Q8IY17 1366 aa14.74□□□□□ -0.05
SCAF8-203ENST00000417268 STX6O43752 255 aa14.74□□□□□ -0.05
SCAF8-203ENST00000417268 TRAF1Q13077 416 aa14.74□□□□□ -0.05
SCAF8-203ENST00000417268 TMEM132AQ24JP5 1023 aa14.74□□□□□ -0.05
SCAF8-203ENST00000417268 MAST3O60307 1309 aa14.74□□□□□ -0.05
SCAF8-203ENST00000417268 ZNF165P49910 485 aa14.74□□□□□ -0.05
SCAF8-203ENST00000417268 GUCY1B3Q02153 619 aa14.74□□□□□ -0.05
SCAF8-203ENST00000417268 PALLDQ8WX93 1383 aa14.73□□□□□ -0.05
SCAF8-203ENST00000417268 ZSCAN12O43309 604 aa14.73□□□□□ -0.05
SCAF8-203ENST00000417268 SSBP05455 408 aaKnown RBP eCLIP14.73□□□□□ -0.05
SCAF8-203ENST00000417268 TTC6Q86TZ1 520 aa14.73□□□□□ -0.05
SCAF8-203ENST00000417268 CCDC144CPQ8IYA2 1237 aa14.73□□□□□ -0.05
SCAF8-203ENST00000417268 TMX3Q96JJ7 454 aa14.73□□□□□ -0.05
SCAF8-203ENST00000417268 ZHX3Q9H4I2 956 aa14.73□□□□□ -0.05
SCAF8-203ENST00000417268 CERS3Q8IU89 383 aa14.73□□□□□ -0.05
SCAF8-203ENST00000417268 ERVV-1B6SEH8 477 aa14.73□□□□□ -0.05
SCAF8-203ENST00000417268 MBD4O95243 580 aa14.73□□□□□ -0.05
SCAF8-203ENST00000417268 ARHGAP29Q52LW3 1261 aa14.73□□□□□ -0.05
SCAF8-203ENST00000417268 OTUD7AQ8TE49 926 aaPredicted RBP14.73□□□□□ -0.05
SCAF8-203ENST00000417268 APPBP2Q92624 585 aa14.73□□□□□ -0.05
SCAF8-203ENST00000417268 RAB34Q9BZG1 259 aa14.73□□□□□ -0.05
SCAF8-203ENST00000417268 EHMT1Q9H9B1 1298 aa14.73□□□□□ -0.05
SCAF8-203ENST00000417268 MAGEC2Q9UBF1 373 aaPredicted RBP14.73□□□□□ -0.05
SCAF8-203ENST00000417268 KBTBD3Q8NAB2 608 aa14.73□□□□□ -0.05
SCAF8-203ENST00000417268 SPATA31A6Q5VVP1 1343 aa14.73□□□□□ -0.05
SCAF8-203ENST00000417268 NRXN1Q9ULB1 1477 aa14.72□□□□□ -0.05
SCAF8-203ENST00000417268 LARGE2Q8N3Y3 721 aa14.72□□□□□ -0.05
SCAF8-203ENST00000417268 VAT1LQ9HCJ6 419 aa14.72□□□□□ -0.05
SCAF8-203ENST00000417268 CRB1P82279 1406 aa14.72□□□□□ -0.05
SCAF8-203ENST00000417268 PRAMEF22A3QJZ6 481 aa14.72□□□□□ -0.05
SCAF8-203ENST00000417268 GJB2P29033 226 aa14.72□□□□□ -0.05
SCAF8-203ENST00000417268 DDX19AQ9NUU7 478 aaKnown RBP14.72□□□□□ -0.05
SCAF8-203ENST00000417268 ZNHIT6Q9NWK9 470 aaKnown RBP14.72□□□□□ -0.05
SCAF8-203ENST00000417268 TFIP11Q9UBB9 837 aaKnown RBP14.72□□□□□ -0.05
SCAF8-203ENST00000417268 MSL1Q68DK7 614 aa14.72□□□□□ -0.05
SCAF8-203ENST00000417268 SLC26A6Q9BXS9 759 aa14.72□□□□□ -0.05
SCAF8-203ENST00000417268 VWDEQ8N2E2 1590 aa14.72□□□□□ -0.05
SCAF8-203ENST00000417268 NCOA3Q9Y6Q9 1424 aa14.72□□□□□ -0.05
SCAF8-203ENST00000417268 PRC1O43663 620 aa14.71□□□□□ -0.05
SCAF8-203ENST00000417268 RBM6P78332 1123 aaKnown RBP14.71□□□□□ -0.05
SCAF8-203ENST00000417268 RBM26Q5T8P6 1007 aaKnown RBP14.71□□□□□ -0.05
SCAF8-203ENST00000417268 WDR78Q5VTH9 848 aa14.71□□□□□ -0.05
SCAF8-203ENST00000417268 CREB3L3Q68CJ9 461 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms