RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 F8W031 263 aaPredicted RBP13.61□□□□□ -0.23
UBR4-205ENST00000417040 UTP14CQ5TAP6 766 aaKnown RBP13.61□□□□□ -0.23
UBR4-205ENST00000417040 ACTN2P35609 894 aa13.61□□□□□ -0.23
UBR4-205ENST00000417040 PSMC4P43686 418 aa13.61□□□□□ -0.23
UBR4-205ENST00000417040 NCOA5Q9HCD5 579 aaKnown RBP13.61□□□□□ -0.23
UBR4-205ENST00000417040 VWA3AA6NCI4 1184 aa13.6□□□□□ -0.23
UBR4-205ENST00000417040 FOXO3O43524 673 aa13.6□□□□□ -0.23
UBR4-205ENST00000417040 ARL1P40616 181 aaPredicted RBP13.6□□□□□ -0.23
UBR4-205ENST00000417040 VAV2P52735 878 aa13.6□□□□□ -0.23
UBR4-205ENST00000417040 OTUD7BQ6GQQ9 843 aa13.6□□□□□ -0.23
UBR4-205ENST00000417040 COPS6Q7L5N1 327 aa13.6□□□□□ -0.23
UBR4-205ENST00000417040 IGSF22Q8N9C0 903 aa13.6□□□□□ -0.23
UBR4-205ENST00000417040 RPGRQ92834 1020 aaKnown RBP13.6□□□□□ -0.23
UBR4-205ENST00000417040 DCTPP1Q9H773 170 aa13.6□□□□□ -0.23
UBR4-205ENST00000417040 BUB1BO60566 1050 aaPredicted RBP13.6□□□□□ -0.23
UBR4-205ENST00000417040 PLCB3Q01970 1234 aa13.6□□□□□ -0.23
UBR4-205ENST00000417040 UAP1Q16222 522 aaPredicted RBP13.6□□□□□ -0.23
UBR4-205ENST00000417040 SNAPC4Q5SXM2 1469 aa13.6□□□□□ -0.23
UBR4-205ENST00000417040 TRIM75PA6NK02 468 aa13.6□□□□□ -0.23
UBR4-205ENST00000417040 C6orf229H3BNL8 230 aa13.6□□□□□ -0.23
UBR4-205ENST00000417040 CLNS1AP54105 237 aaKnown RBP13.6□□□□□ -0.23
UBR4-205ENST00000417040 PICALMQ13492 652 aa13.6□□□□□ -0.23
UBR4-205ENST00000417040 LMBR1LQ6UX01 489 aa13.6□□□□□ -0.23
UBR4-205ENST00000417040 NAPGQ99747 312 aaPredicted RBP13.6□□□□□ -0.23
UBR4-205ENST00000417040 DCAF17Q5H9S7 520 aaPredicted RBP13.6□□□□□ -0.23
UBR4-205ENST00000417040 TMCO4Q5TGY1 634 aa13.6□□□□□ -0.23
UBR4-205ENST00000417040 LUC7L2Q9Y383 392 aaKnown RBP13.6□□□□□ -0.23
UBR4-205ENST00000417040 WDHD1O75717 1129 aaPredicted RBP13.59□□□□□ -0.23
UBR4-205ENST00000417040 STXBP4Q6ZWJ1 553 aa13.59□□□□□ -0.23
UBR4-205ENST00000417040 NAP1L3Q99457 506 aaPredicted RBP13.59□□□□□ -0.23
UBR4-205ENST00000417040 TRIM31Q9BZY9 425 aa13.59□□□□□ -0.23
UBR4-205ENST00000417040 EHMT1Q9H9B1 1298 aa13.59□□□□□ -0.23
UBR4-205ENST00000417040 GOLGA6CA6NDK9 693 aa13.59□□□□□ -0.23
UBR4-205ENST00000417040 NBPF7P0C2Y1 421 aaPredicted RBP13.59□□□□□ -0.23
UBR4-205ENST00000417040 GOLGA6DP0CG33 693 aa13.59□□□□□ -0.23
UBR4-205ENST00000417040 FANCCQ00597 558 aa13.59□□□□□ -0.23
UBR4-205ENST00000417040 MYL5Q02045 173 aa13.59□□□□□ -0.23
UBR4-205ENST00000417040 SPAG1Q07617 926 aa13.59□□□□□ -0.23
UBR4-205ENST00000417040 STMN4Q9H169 189 aaPredicted RBP13.59□□□□□ -0.23
UBR4-205ENST00000417040 LMBRD1Q9NUN5 540 aa13.59□□□□□ -0.23
UBR4-205ENST00000417040 GOLGA6AQ9NYA3 693 aa13.59□□□□□ -0.23
UBR4-205ENST00000417040 CLGNO14967 610 aa13.59□□□□□ -0.23
UBR4-205ENST00000417040 SMC6Q96SB8 1091 aa13.59□□□□□ -0.23
UBR4-205ENST00000417040 LRRC27Q9C0I9 530 aa13.59□□□□□ -0.23
UBR4-205ENST00000417040 GRM8O00222 908 aa13.59□□□□□ -0.23
UBR4-205ENST00000417040 NDUFAB1O14561 156 aa13.59□□□□□ -0.23
UBR4-205ENST00000417040 INPP5BP32019 993 aa13.59□□□□□ -0.23
UBR4-205ENST00000417040 MAGEB6Q8N7X4 407 aa13.59□□□□□ -0.23
UBR4-205ENST00000417040 CRNKL1Q9BZJ0 848 aaKnown RBP13.59□□□□□ -0.23
UBR4-205ENST00000417040 JAG2Q9Y219 1238 aa13.59□□□□□ -0.23
UBR4-205ENST00000417040 FAM212AQ96EL1 285 aa13.59□□□□□ -0.23
UBR4-205ENST00000417040 CHAMP1Q96JM3 812 aa13.59□□□□□ -0.23
UBR4-205ENST00000417040 ERCC5P28715 1186 aaPredicted RBP13.58□□□□□ -0.23
UBR4-205ENST00000417040 UIMC1Q96RL1 719 aa13.58□□□□□ -0.23
UBR4-205ENST00000417040 CC2D2AQ9P2K1 1620 aa13.58□□□□□ -0.23
UBR4-205ENST00000417040 CCDC172P0C7W6 258 aa13.58□□□□□ -0.24
UBR4-205ENST00000417040 ZBTB21Q9ULJ3 1066 aa13.58□□□□□ -0.24
UBR4-205ENST00000417040 SNX14Q9Y5W7 946 aa13.58□□□□□ -0.24
UBR4-205ENST00000417040 ANKLE2Q86XL3 938 aa13.58□□□□□ -0.24
UBR4-205ENST00000417040 ESR2Q92731 530 aa13.58□□□□□ -0.24
UBR4-205ENST00000417040 CCDC77Q9BR77 488 aa13.58□□□□□ -0.24
UBR4-205ENST00000417040 ZNF354CQ86Y25 554 aa13.58□□□□□ -0.24
UBR4-205ENST00000417040 HELBQ8NG08 1087 aaPredicted RBP13.58□□□□□ -0.24
UBR4-205ENST00000417040 INTS4Q96HW7 963 aaKnown RBP13.58□□□□□ -0.24
UBR4-205ENST00000417040 TMEM63CQ9P1W3 806 aa13.58□□□□□ -0.24
UBR4-205ENST00000417040 TUBB4AP04350 444 aa13.58□□□□□ -0.24
UBR4-205ENST00000417040 CEP85LQ5SZL2 805 aa13.58□□□□□ -0.24
UBR4-205ENST00000417040 DDX23Q9BUQ8 820 aaKnown RBP13.58□□□□□ -0.24
UBR4-205ENST00000417040 CLSTN2Q9H4D0 955 aa13.58□□□□□ -0.24
UBR4-205ENST00000417040 VAMP4O75379 141 aa13.57□□□□□ -0.24
UBR4-205ENST00000417040 PPM1FP49593 454 aaPredicted RBP13.57□□□□□ -0.24
UBR4-205ENST00000417040 MTX1Q13505 466 aa13.57□□□□□ -0.24
UBR4-205ENST00000417040 CDC37L1Q7L3B6 337 aa13.57□□□□□ -0.24
UBR4-205ENST00000417040 LMBR1Q8WVP7 490 aa13.57□□□□□ -0.24
UBR4-205ENST00000417040 RNF113AO15541 343 aaKnown RBP13.57□□□□□ -0.24
UBR4-205ENST00000417040 HINFPQ9BQA5 517 aa13.57□□□□□ -0.24
UBR4-205ENST00000417040 BICC1Q9H694 974 aaKnown RBP13.57□□□□□ -0.24
UBR4-205ENST00000417040 ELP1O95163 1332 aa13.57□□□□□ -0.24
UBR4-205ENST00000417040 ACEP12821 1306 aa13.57□□□□□ -0.24
UBR4-205ENST00000417040 RPS6KB1P23443 525 aa13.57□□□□□ -0.24
UBR4-205ENST00000417040 JAKMIP2Q96AA8 810 aa13.57□□□□□ -0.24
UBR4-205ENST00000417040 PPP1R12CQ9BZL4 782 aa13.57□□□□□ -0.24
UBR4-205ENST00000417040 SLC27A2O14975 620 aa13.57□□□□□ -0.24
UBR4-205ENST00000417040 ATP2B3Q16720 1220 aa13.57□□□□□ -0.24
UBR4-205ENST00000417040 ANKRD24Q8TF21 1146 aa13.57□□□□□ -0.24
UBR4-205ENST00000417040 NOC4LQ9BVI4 516 aaKnown RBP13.57□□□□□ -0.24
UBR4-205ENST00000417040 TSGA10Q9BZW7 698 aa13.57□□□□□ -0.24
UBR4-205ENST00000417040 RALGAPBQ86X10 1494 aa13.57□□□□□ -0.24
UBR4-205ENST00000417040 PCK1P35558 622 aa13.57□□□□□ -0.24
UBR4-205ENST00000417040 LACTBP83111 547 aaPredicted RBP13.57□□□□□ -0.24
UBR4-205ENST00000417040 ATP11AP98196 1134 aa13.57□□□□□ -0.24
UBR4-205ENST00000417040 SETDB1Q15047 1291 aa13.57□□□□□ -0.24
UBR4-205ENST00000417040 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.57□□□□□ -0.24
UBR4-205ENST00000417040 NDUFB9Q9Y6M9 179 aa13.57□□□□□ -0.24
UBR4-205ENST00000417040 ARID4AP29374 1257 aaPredicted RBP13.56□□□□□ -0.24
UBR4-205ENST00000417040 INTS8Q75QN2 995 aaKnown RBP13.56□□□□□ -0.24
UBR4-205ENST00000417040 CNNM2Q9H8M5 875 aa13.56□□□□□ -0.24
UBR4-205ENST00000417040 IRX5P78411 483 aaPredicted RBP13.56□□□□□ -0.24
UBR4-205ENST00000417040 CHRNA2Q15822 529 aa13.56□□□□□ -0.24
UBR4-205ENST00000417040 MTHFSDQ2M296 383 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms