RNA–Protein interactions for RNA: ENST00000416426.6

MSI2-203, Transcript of musashi RNA binding protein 2, humanhuman

TSL 2 BASIC

Gene MSI2, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-203ENST00000416426 RASGRF1Q13972 1273 aa21.66■■□□□ 1.06
MSI2-203ENST00000416426 SLC9C2Q5TAH2 1124 aa21.66■■□□□ 1.06
MSI2-203ENST00000416426 BICDL1Q6ZP65 573 aa21.66■■□□□ 1.06
MSI2-203ENST00000416426 AMIGO3Q86WK7 504 aa21.66■■□□□ 1.06
MSI2-203ENST00000416426 ISY1Q9ULR0 285 aaKnown RBP21.66■■□□□ 1.06
MSI2-203ENST00000416426 TAF1P21675 1872 aa21.65■■□□□ 1.06
MSI2-203ENST00000416426 BRWD3Q6RI45 1802 aa21.65■■□□□ 1.06
MSI2-203ENST00000416426 A0A0G2JLW4 131 aa21.65■■□□□ 1.06
MSI2-203ENST00000416426 PDE6AP16499 860 aa21.65■■□□□ 1.06
MSI2-203ENST00000416426 L1TD1Q5T7N2 865 aaKnown RBP21.65■■□□□ 1.06
MSI2-203ENST00000416426 PRPF40AO75400 957 aaKnown RBP21.64■■□□□ 1.06
MSI2-203ENST00000416426 TTLL5Q6EMB2 1281 aa21.64■■□□□ 1.06
MSI2-203ENST00000416426 FBXL16Q8N461 479 aa21.64■■□□□ 1.06
MSI2-203ENST00000416426 CHAMP1Q96JM3 812 aa21.64■■□□□ 1.06
MSI2-203ENST00000416426 ZNF532Q9HCE3 1301 aa21.64■■□□□ 1.05
MSI2-203ENST00000416426 IDH1O75874 414 aaKnown RBP21.63■■□□□ 1.05
MSI2-203ENST00000416426 FGAP02671 866 aa21.63■■□□□ 1.05
MSI2-203ENST00000416426 GTF2E1P29083 439 aaPredicted RBP21.63■■□□□ 1.05
MSI2-203ENST00000416426 UBE4AQ14139 1066 aa21.63■■□□□ 1.05
MSI2-203ENST00000416426 GTF3C6Q969F1 213 aa21.63■■□□□ 1.05
MSI2-203ENST00000416426 MTMR6Q9Y217 621 aa21.63■■□□□ 1.05
MSI2-203ENST00000416426 ZNF804BA4D1E1 1349 aa21.63■■□□□ 1.05
MSI2-203ENST00000416426 IMMTQ16891 758 aaKnown RBP21.63■■□□□ 1.05
MSI2-203ENST00000416426 NBPF5PQ86XG9 351 aaPredicted RBP21.63■■□□□ 1.05
MSI2-203ENST00000416426 WWC3Q9ULE0 1092 aa21.63■■□□□ 1.05
MSI2-203ENST00000416426 GOLGA6L3A6NEY3 463 aa21.62■■□□□ 1.05
MSI2-203ENST00000416426 F13A1P00488 732 aa21.62■■□□□ 1.05
MSI2-203ENST00000416426 BCAMP50895 628 aa21.62■■□□□ 1.05
MSI2-203ENST00000416426 TPTE2Q6XPS3 522 aa21.62■■□□□ 1.05
MSI2-203ENST00000416426 NLRP3Q96P20 1036 aa21.62■■□□□ 1.05
MSI2-203ENST00000416426 UBR3Q6ZT12 1888 aa21.62■■□□□ 1.05
MSI2-203ENST00000416426 ADRA2BP18089 450 aa21.61■■□□□ 1.05
MSI2-203ENST00000416426 TRAPPC3LQ5T215 181 aa21.61■■□□□ 1.05
MSI2-203ENST00000416426 MAP3K12Q12852 859 aa21.6■■□□□ 1.05
MSI2-203ENST00000416426 TMEM87AQ8NBN3 555 aa21.6■■□□□ 1.05
MSI2-203ENST00000416426 GPT2Q8TD30 523 aa21.6■■□□□ 1.05
MSI2-203ENST00000416426 BRF1Q92994 677 aa21.6■■□□□ 1.05
MSI2-203ENST00000416426 LRRC4BQ9NT99 713 aa21.6■■□□□ 1.05
MSI2-203ENST00000416426 MINPP1Q9UNW1 487 aa21.6■■□□□ 1.05
MSI2-203ENST00000416426 PFKFB2O60825 505 aa21.6■■□□□ 1.05
MSI2-203ENST00000416426 PDCP20941 246 aa21.6■■□□□ 1.05
MSI2-203ENST00000416426 ALX1Q15699 326 aa21.6■■□□□ 1.05
MSI2-203ENST00000416426 FAM196AQ6ZSG2 479 aa21.6■■□□□ 1.05
MSI2-203ENST00000416426 CELF1Q92879 486 aaKnown RBP21.6■■□□□ 1.05
MSI2-203ENST00000416426 ZMYM6O95789 1325 aa21.59■■□□□ 1.05
MSI2-203ENST00000416426 RFC4P35249 363 aa21.59■■□□□ 1.05
MSI2-203ENST00000416426 STRBPQ96SI9 672 aaKnown RBP21.59■■□□□ 1.05
MSI2-203ENST00000416426 ATP6V1DQ9Y5K8 247 aa21.59■■□□□ 1.05
MSI2-203ENST00000416426 TNRC6CQ9HCJ0 1690 aaKnown RBP21.59■■□□□ 1.05
MSI2-203ENST00000416426 WDR19Q8NEZ3 1342 aa21.59■■□□□ 1.05
MSI2-203ENST00000416426 TCHHQ07283 1943 aa21.58■■□□□ 1.05
MSI2-203ENST00000416426 MBD3O95983 291 aa21.58■■□□□ 1.05
MSI2-203ENST00000416426 EVCP57679 992 aa21.58■■□□□ 1.05
MSI2-203ENST00000416426 RPS8P62241 208 aaKnown RBP21.58■■□□□ 1.05
MSI2-203ENST00000416426 LLPHQ9BRT6 129 aaKnown RBP21.58■■□□□ 1.05
MSI2-203ENST00000416426 LRRC2Q9BYS8 371 aa21.58■■□□□ 1.05
MSI2-203ENST00000416426 EP400Q96L91 3159 aa21.58■■□□□ 1.04
MSI2-203ENST00000416426 CARMIL3Q8ND23 1372 aa21.58■■□□□ 1.04
MSI2-203ENST00000416426 STK3Q13188 491 aa21.58■■□□□ 1.04
MSI2-203ENST00000416426 MB21D2Q8IYB1 491 aaPredicted RBP21.58■■□□□ 1.04
MSI2-203ENST00000416426 ZNF213O14771 459 aa21.57■■□□□ 1.04
MSI2-203ENST00000416426 TM4SF1P30408 202 aa21.57■■□□□ 1.04
MSI2-203ENST00000416426 SLC27A3Q5K4L6 730 aa21.57■■□□□ 1.04
MSI2-203ENST00000416426 LARP1BQ659C4 914 aaKnown RBP21.57■■□□□ 1.04
MSI2-203ENST00000416426 KRT27Q7Z3Y8 459 aa21.57■■□□□ 1.04
MSI2-203ENST00000416426 MAGEB6Q8N7X4 407 aa21.57■■□□□ 1.04
MSI2-203ENST00000416426 ZNF274Q96GC6 653 aaPredicted RBP21.57■■□□□ 1.04
MSI2-203ENST00000416426 HAND2P61296 217 aa21.56■■□□□ 1.04
MSI2-203ENST00000416426 FGD1P98174 961 aa21.56■■□□□ 1.04
MSI2-203ENST00000416426 SMARCC2Q8TAQ2 1214 aa21.56■■□□□ 1.04
MSI2-203ENST00000416426 GNL3LQ9NVN8 582 aaKnown RBP21.56■■□□□ 1.04
MSI2-203ENST00000416426 ZBTB22O15209 634 aa21.55■■□□□ 1.04
MSI2-203ENST00000416426 ZNF445P59923 1031 aa21.55■■□□□ 1.04
MSI2-203ENST00000416426 APOBRQ0VD83 1088 aa21.55■■□□□ 1.04
MSI2-203ENST00000416426 SCRN1Q12765 414 aa21.55■■□□□ 1.04
MSI2-203ENST00000416426 AIDAQ96BJ3 306 aa21.55■■□□□ 1.04
MSI2-203ENST00000416426 NBPF3Q9H094 633 aa21.55■■□□□ 1.04
MSI2-203ENST00000416426 DTNBO60941 627 aa21.55■■□□□ 1.04
MSI2-203ENST00000416426 MRE11P49959 708 aa21.55■■□□□ 1.04
MSI2-203ENST00000416426 NFIXQ14938 502 aa21.55■■□□□ 1.04
MSI2-203ENST00000416426 USP48Q86UV5 1035 aa21.55■■□□□ 1.04
MSI2-203ENST00000416426 NCOA7Q8NI08 942 aa21.55■■□□□ 1.04
MSI2-203ENST00000416426 ANKRD2Q9GZV1 360 aa21.55■■□□□ 1.04
MSI2-203ENST00000416426 COL1A1P02452 1464 aaPredicted RBP21.54■■□□□ 1.04
MSI2-203ENST00000416426 PNPLA7Q6ZV29 1317 aa21.54■■□□□ 1.04
MSI2-203ENST00000416426 PATL2C9JE40 543 aaKnown RBP21.54■■□□□ 1.04
MSI2-203ENST00000416426 PHF14O94880 888 aa21.54■■□□□ 1.04
MSI2-203ENST00000416426 MCM5P33992 734 aa21.54■■□□□ 1.04
MSI2-203ENST00000416426 GYG1P46976 350 aa21.54■■□□□ 1.04
MSI2-203ENST00000416426 CAVIN1Q6NZI2 390 aaKnown RBP21.54■■□□□ 1.04
MSI2-203ENST00000416426 FBXO33Q7Z6M2 555 aa21.54■■□□□ 1.04
MSI2-203ENST00000416426 GAS2L3Q86XJ1 694 aa21.54■■□□□ 1.04
MSI2-203ENST00000416426 CHMP4CQ96CF2 233 aa21.54■■□□□ 1.04
MSI2-203ENST00000416426 TIAM2Q8IVF5 1701 aa21.54■■□□□ 1.04
MSI2-203ENST00000416426 VPS37CA5D8V6 355 aaPredicted RBP21.53■■□□□ 1.04
MSI2-203ENST00000416426 XRCC6P12956 609 aaKnown RBP eCLIP21.53■■□□□ 1.049e-8■■□□□ 13
MSI2-203ENST00000416426 NCLP19338 710 aaKnown RBP21.53■■□□□ 1.04
MSI2-203ENST00000416426 CAVIN4Q5BKX8 364 aa21.53■■□□□ 1.04
MSI2-203ENST00000416426 FAM84BQ96KN1 310 aaPredicted RBP21.53■■□□□ 1.04
MSI2-203ENST00000416426 SEMA3EO15041 775 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms