RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 RANBP2P49792 3224 aaKnown RBP12.06□□□□□ -0.48
LINC01238-201ENST00000416204 PPP1R12BO60237 982 aaPredicted RBP12.05□□□□□ -0.48
LINC01238-201ENST00000416204 TAF5LO75529 589 aa12.05□□□□□ -0.48
LINC01238-201ENST00000416204 USP2O75604 605 aaPredicted RBP12.05□□□□□ -0.48
LINC01238-201ENST00000416204 DDX58O95786 925 aaKnown RBP12.05□□□□□ -0.48
LINC01238-201ENST00000416204 ITGA6P23229 1130 aa12.05□□□□□ -0.48
LINC01238-201ENST00000416204 RBM5P52756 815 aaKnown RBP eCLIP12.05□□□□□ -0.48
LINC01238-201ENST00000416204 INHBEP58166 350 aa12.05□□□□□ -0.48
LINC01238-201ENST00000416204 SLC4A8Q2Y0W8 1093 aa12.05□□□□□ -0.48
LINC01238-201ENST00000416204 SLC9C1Q4G0N8 1177 aa12.05□□□□□ -0.48
LINC01238-201ENST00000416204 TSPYL6Q8N831 410 aa12.05□□□□□ -0.48
LINC01238-201ENST00000416204 ZNF333Q96JL9 665 aa12.05□□□□□ -0.48
LINC01238-201ENST00000416204 PRMT6Q96LA8 375 aaPredicted RBP12.05□□□□□ -0.48
LINC01238-201ENST00000416204 CD209Q9NNX6 404 aa12.05□□□□□ -0.48
LINC01238-201ENST00000416204 LEMD3Q9Y2U8 911 aa12.05□□□□□ -0.48
LINC01238-201ENST00000416204 ZNF853P0CG23 659 aa12.04□□□□□ -0.48
LINC01238-201ENST00000416204 IREB2P48200 963 aaKnown RBP12.04□□□□□ -0.48
LINC01238-201ENST00000416204 CHRNDQ07001 517 aa12.04□□□□□ -0.48
LINC01238-201ENST00000416204 RALBP1Q15311 655 aa12.04□□□□□ -0.48
LINC01238-201ENST00000416204 MAP3K11Q16584 847 aa12.04□□□□□ -0.48
LINC01238-201ENST00000416204 SH3TC2Q8TF17 1288 aa12.04□□□□□ -0.48
LINC01238-201ENST00000416204 OPTNQ96CV9 577 aa12.04□□□□□ -0.48
LINC01238-201ENST00000416204 MPHOSPH8Q99549 860 aa12.04□□□□□ -0.48
LINC01238-201ENST00000416204 ARHGAP39Q9C0H5 1083 aa12.04□□□□□ -0.48
LINC01238-201ENST00000416204 TRIOBPQ9H2D6 2365 aa12.03□□□□□ -0.48
LINC01238-201ENST00000416204 SPDYE2BA6NHP3 402 aa12.03□□□□□ -0.48
LINC01238-201ENST00000416204 NEURL1BA8MQ27 555 aa12.03□□□□□ -0.48
LINC01238-201ENST00000416204 SPDYE6P0CI01 402 aa12.03□□□□□ -0.48
LINC01238-201ENST00000416204 RASA3Q14644 834 aa12.03□□□□□ -0.48
LINC01238-201ENST00000416204 SUPT20HL1Q3ZLR7 823 aa12.03□□□□□ -0.48
LINC01238-201ENST00000416204 OTUD7BQ6GQQ9 843 aa12.03□□□□□ -0.48
LINC01238-201ENST00000416204 KSR2Q6VAB6 950 aa12.03□□□□□ -0.48
LINC01238-201ENST00000416204 CHRDL2Q6WN34 429 aa12.03□□□□□ -0.48
LINC01238-201ENST00000416204 G2E3Q7L622 706 aa12.03□□□□□ -0.48
LINC01238-201ENST00000416204 BRI3BPQ8WY22 251 aa12.03□□□□□ -0.48
LINC01238-201ENST00000416204 A0A0C4DFX4 3053 aa12.02□□□□□ -0.48
LINC01238-201ENST00000416204 COL1A1P02452 1464 aaPredicted RBP12.02□□□□□ -0.48
LINC01238-201ENST00000416204 CEP290O15078 2479 aa12.02□□□□□ -0.48
LINC01238-201ENST00000416204 APAF1O14727 1248 aa12.02□□□□□ -0.49
LINC01238-201ENST00000416204 NEXNQ0ZGT2 675 aa12.02□□□□□ -0.49
LINC01238-201ENST00000416204 TAF1CQ15572 869 aaPredicted RBP12.02□□□□□ -0.49
LINC01238-201ENST00000416204 CCDC30Q5VVM6 783 aa12.02□□□□□ -0.49
LINC01238-201ENST00000416204 TSR2Q969E8 191 aaKnown RBP12.02□□□□□ -0.49
LINC01238-201ENST00000416204 ANKRD2Q9GZV1 360 aa12.02□□□□□ -0.49
LINC01238-201ENST00000416204 IFT57Q9NWB7 429 aa12.02□□□□□ -0.49
LINC01238-201ENST00000416204 RBBP6Q7Z6E9 1792 aaKnown RBP12.01□□□□□ -0.49
LINC01238-201ENST00000416204 CCL15-CCL14A0A0B4J2E2 113 aa12.01□□□□□ -0.49
LINC01238-201ENST00000416204 MYO1BO43795 1136 aa12.01□□□□□ -0.49
LINC01238-201ENST00000416204 PLIN1O60240 522 aa12.01□□□□□ -0.49
LINC01238-201ENST00000416204 GNAI1P63096 354 aa12.01□□□□□ -0.49
LINC01238-201ENST00000416204 CCL15Q16663 113 aa12.01□□□□□ -0.49
LINC01238-201ENST00000416204 ANKRD13AQ8IZ07 590 aa12.01□□□□□ -0.49
LINC01238-201ENST00000416204 FAM43AQ8N2R8 423 aa12.01□□□□□ -0.49
LINC01238-201ENST00000416204 OTUD5Q96G74 571 aa12.01□□□□□ -0.49
LINC01238-201ENST00000416204 MS4A4AQ96JQ5 239 aa12.01□□□□□ -0.49
LINC01238-201ENST00000416204 CHMP3Q9Y3E7 222 aa12.01□□□□□ -0.49
LINC01238-201ENST00000416204 PPP2R3BQ9Y5P8 575 aa12.01□□□□□ -0.49
LINC01238-201ENST00000416204 ZSWIM8A7E2V4 1837 aa12.01□□□□□ -0.49
LINC01238-201ENST00000416204 MYBBP1AQ9BQG0 1328 aaKnown RBP12.01□□□□□ -0.49
LINC01238-201ENST00000416204 TCP10L2B9ZVM9 353 aa12□□□□□ -0.49
LINC01238-201ENST00000416204 H7C1W4 665 aa12□□□□□ -0.49
LINC01238-201ENST00000416204 MTMR14Q8NCE2 650 aa12□□□□□ -0.49
LINC01238-201ENST00000416204 TMEM39BQ9GZU3 492 aa12□□□□□ -0.49
LINC01238-201ENST00000416204 TDRD3Q9H7E2 651 aaKnown RBP12□□□□□ -0.49
LINC01238-201ENST00000416204 IRS2Q9Y4H2 1338 aa12□□□□□ -0.49
LINC01238-201ENST00000416204 COL6A3P12111 3177 aa12□□□□□ -0.49
LINC01238-201ENST00000416204 TESPA1A2RU30 521 aaPredicted RBP11.99□□□□□ -0.49
LINC01238-201ENST00000416204 DDX10Q13206 875 aaKnown RBP11.99□□□□□ -0.49
LINC01238-201ENST00000416204 VGLL4Q14135 290 aa11.99□□□□□ -0.49
LINC01238-201ENST00000416204 GCKRQ14397 625 aa11.99□□□□□ -0.49
LINC01238-201ENST00000416204 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.99□□□□□ -0.49
LINC01238-201ENST00000416204 NBPF11Q86T75 865 aa11.99□□□□□ -0.49
LINC01238-201ENST00000416204 DPF3Q92784 378 aa11.99□□□□□ -0.49
LINC01238-201ENST00000416204 ZNF594Q96JF6 807 aaPredicted RBP11.99□□□□□ -0.49
LINC01238-201ENST00000416204 ZFYVE28Q9HCC9 887 aa11.99□□□□□ -0.49
LINC01238-201ENST00000416204 RBM27Q9P2N5 1060 aaKnown RBP11.99□□□□□ -0.49
LINC01238-201ENST00000416204 ZNF70Q9UC06 446 aaPredicted RBP11.99□□□□□ -0.49
LINC01238-201ENST00000416204 OTOFQ9HC10 1997 aa11.99□□□□□ -0.49
LINC01238-201ENST00000416204 MYH3P11055 1940 aa11.98□□□□□ -0.49
LINC01238-201ENST00000416204 MMP14P50281 582 aa11.98□□□□□ -0.49
LINC01238-201ENST00000416204 CACNB3P54284 484 aa11.98□□□□□ -0.49
LINC01238-201ENST00000416204 CASP7P55210 303 aa11.98□□□□□ -0.49
LINC01238-201ENST00000416204 MTFR1Q15390 333 aa11.98□□□□□ -0.49
LINC01238-201ENST00000416204 ZNF804AQ7Z570 1209 aa11.98□□□□□ -0.49
LINC01238-201ENST00000416204 ANKRD18BA2A2Z9 1011 aa11.97□□□□□ -0.49
LINC01238-201ENST00000416204 CSF1RP07333 972 aa11.97□□□□□ -0.49
LINC01238-201ENST00000416204 IL1R1P14778 569 aa11.97□□□□□ -0.49
LINC01238-201ENST00000416204 GRIK5Q16478 980 aa11.97□□□□□ -0.49
LINC01238-201ENST00000416204 SPDYE2Q495Y8 402 aa11.97□□□□□ -0.49
LINC01238-201ENST00000416204 SHISA4Q96DD7 197 aa11.97□□□□□ -0.49
LINC01238-201ENST00000416204 TEPSINQ96N21 525 aa11.97□□□□□ -0.49
LINC01238-201ENST00000416204 STK31Q9BXU1 1019 aa11.97□□□□□ -0.49
LINC01238-201ENST00000416204 TTF2Q9UNY4 1162 aaKnown RBP11.97□□□□□ -0.49
LINC01238-201ENST00000416204 DLL1O00548 723 aa11.96□□□□□ -0.49
LINC01238-201ENST00000416204 SLC4A2P04920 1241 aa11.96□□□□□ -0.49
LINC01238-201ENST00000416204 GYG1P46976 350 aa11.96□□□□□ -0.49
LINC01238-201ENST00000416204 GTF2A2P52657 109 aa11.96□□□□□ -0.49
LINC01238-201ENST00000416204 MAP3K9P80192 1104 aa11.96□□□□□ -0.49
LINC01238-201ENST00000416204 PLA2G12BQ9BX93 195 aa11.96□□□□□ -0.49
LINC01238-201ENST00000416204 IQSEC3Q9UPP2 1182 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms