RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 GCKRQ14397 625 aa17.91■□□□□ 0.46
PHRF1-203ENST00000416188 TMTC2Q8N394 836 aa17.91■□□□□ 0.46
PHRF1-203ENST00000416188 NECAB1Q8N987 351 aa17.9■□□□□ 0.46
PHRF1-203ENST00000416188 ZNF526Q8TF50 670 aaPredicted RBP17.9■□□□□ 0.46
PHRF1-203ENST00000416188 GNAQP50148 359 aa17.9■□□□□ 0.46
PHRF1-203ENST00000416188 PDE1AP54750 535 aa17.9■□□□□ 0.46
PHRF1-203ENST00000416188 GJD4Q96KN9 370 aaPredicted RBP17.9■□□□□ 0.46
PHRF1-203ENST00000416188 SLC26A6Q9BXS9 759 aa17.9■□□□□ 0.46
PHRF1-203ENST00000416188 KIF5CO60282 957 aa17.9■□□□□ 0.46
PHRF1-203ENST00000416188 TMX3Q96JJ7 454 aa17.9■□□□□ 0.46
PHRF1-203ENST00000416188 SERPINB2P05120 415 aa17.89■□□□□ 0.46
PHRF1-203ENST00000416188 ISM2Q6H9L7 571 aa17.89■□□□□ 0.46
PHRF1-203ENST00000416188 TMCO3Q6UWJ1 677 aa17.89■□□□□ 0.46
PHRF1-203ENST00000416188 TTLL7Q6ZT98 887 aa17.89■□□□□ 0.46
PHRF1-203ENST00000416188 IDEP14735 1019 aa17.89■□□□□ 0.45
PHRF1-203ENST00000416188 ZNF165P49910 485 aa17.89■□□□□ 0.45
PHRF1-203ENST00000416188 DNA2P51530 1060 aa17.89■□□□□ 0.45
PHRF1-203ENST00000416188 JAKMIP3Q5VZ66 844 aa17.89■□□□□ 0.45
PHRF1-203ENST00000416188 GCC2Q8IWJ2 1684 aa17.89■□□□□ 0.45
PHRF1-203ENST00000416188 RTL1A6NKG5 1358 aa17.89■□□□□ 0.45
PHRF1-203ENST00000416188 SMARCC2Q8TAQ2 1214 aa17.89■□□□□ 0.45
PHRF1-203ENST00000416188 KLHDC4Q8TBB5 520 aa17.89■□□□□ 0.45
PHRF1-203ENST00000416188 LRRC2Q9BYS8 371 aa17.89■□□□□ 0.45
PHRF1-203ENST00000416188 ZBTB1Q9Y2K1 713 aa17.89■□□□□ 0.45
PHRF1-203ENST00000416188 SBNO2Q9Y2G9 1366 aa17.89■□□□□ 0.45
PHRF1-203ENST00000416188 CEP85Q6P2H3 762 aa17.89■□□□□ 0.45
PHRF1-203ENST00000416188 NUP88Q99567 741 aaPredicted RBP17.89■□□□□ 0.45
PHRF1-203ENST00000416188 GTF2IP78347 998 aa17.88■□□□□ 0.45
PHRF1-203ENST00000416188 TBC1D22AQ8WUA7 517 aa17.88■□□□□ 0.45
PHRF1-203ENST00000416188 LPIN2Q92539 896 aa17.88■□□□□ 0.45
PHRF1-203ENST00000416188 CRACR2AQ9BSW2 395 aa17.88■□□□□ 0.45
PHRF1-203ENST00000416188 C16orf45Q96MC5 204 aaPredicted RBP17.88■□□□□ 0.45
PHRF1-203ENST00000416188 KLF18A0A0U1RQI7 1052 aa17.87■□□□□ 0.45
PHRF1-203ENST00000416188 MYOM2P54296 1465 aa17.87■□□□□ 0.45
PHRF1-203ENST00000416188 ZBTB43O43298 467 aa17.87■□□□□ 0.45
PHRF1-203ENST00000416188 MBD4O95243 580 aa17.87■□□□□ 0.45
PHRF1-203ENST00000416188 XAGE2Q96GT9 111 aa17.87■□□□□ 0.45
PHRF1-203ENST00000416188 SPATA31E1Q6ZUB1 1445 aa17.87■□□□□ 0.45
PHRF1-203ENST00000416188 TDRD12Q587J7 1177 aaKnown RBP17.87■□□□□ 0.45
PHRF1-203ENST00000416188 DNAI2Q9GZS0 605 aa17.87■□□□□ 0.45
PHRF1-203ENST00000416188 IL6STP40189 918 aaPredicted RBP17.87■□□□□ 0.45
PHRF1-203ENST00000416188 HEATR3Q7Z4Q2 680 aa17.87■□□□□ 0.45
PHRF1-203ENST00000416188 TCP11L1Q9NUJ3 509 aa17.87■□□□□ 0.45
PHRF1-203ENST00000416188 TTC41PQ6P2S7 1318 aa17.87■□□□□ 0.45
PHRF1-203ENST00000416188 MROH5Q6ZUA9 1318 aa17.87■□□□□ 0.45
PHRF1-203ENST00000416188 ADCY5O95622 1261 aa17.86■□□□□ 0.45
PHRF1-203ENST00000416188 POTEJP0CG39 1038 aa17.86■□□□□ 0.45
PHRF1-203ENST00000416188 TNNT1P13805 278 aa17.86■□□□□ 0.45
PHRF1-203ENST00000416188 UBE2HP62256 183 aa17.86■□□□□ 0.45
PHRF1-203ENST00000416188 ZRSR2Q15696 482 aaKnown RBP17.86■□□□□ 0.45
PHRF1-203ENST00000416188 TMC6Q7Z403 805 aa17.86■□□□□ 0.45
PHRF1-203ENST00000416188 UBA7P41226 1012 aa17.86■□□□□ 0.45
PHRF1-203ENST00000416188 TCP10Q12799 353 aa17.86■□□□□ 0.45
PHRF1-203ENST00000416188 STX1AQ16623 288 aa17.86■□□□□ 0.45
PHRF1-203ENST00000416188 VPS36Q86VN1 386 aa17.86■□□□□ 0.45
PHRF1-203ENST00000416188 SUCLG2Q96I99 432 aa17.86■□□□□ 0.45
PHRF1-203ENST00000416188 TMX1Q9H3N1 280 aa17.86■□□□□ 0.45
PHRF1-203ENST00000416188 TRIM35Q9UPQ4 493 aa17.86■□□□□ 0.45
PHRF1-203ENST00000416188 IVNS1ABPQ9Y6Y0 642 aa17.86■□□□□ 0.45
PHRF1-203ENST00000416188 DESP17661 470 aa17.86■□□□□ 0.45
PHRF1-203ENST00000416188 CTSWP56202 376 aa17.86■□□□□ 0.45
PHRF1-203ENST00000416188 MAP3K15Q6ZN16 1313 aa17.86■□□□□ 0.45
PHRF1-203ENST00000416188 MTIF2P46199 727 aaKnown RBP17.85■□□□□ 0.45
PHRF1-203ENST00000416188 TNFAIP1Q13829 316 aa17.85■□□□□ 0.45
PHRF1-203ENST00000416188 TNNQ9UQP3 1299 aa17.85■□□□□ 0.45
PHRF1-203ENST00000416188 ERBB4Q15303 1308 aa17.85■□□□□ 0.45
PHRF1-203ENST00000416188 FGFR1OPO95684 399 aaKnown RBP17.85■□□□□ 0.45
PHRF1-203ENST00000416188 CASQ1P31415 396 aa17.85■□□□□ 0.45
PHRF1-203ENST00000416188 DOK7Q18PE1 504 aa17.85■□□□□ 0.45
PHRF1-203ENST00000416188 ATP7BP35670 1465 aa17.85■□□□□ 0.45
PHRF1-203ENST00000416188 ATP2B4P23634 1241 aa17.85■□□□□ 0.45
PHRF1-203ENST00000416188 NMIQ13287 307 aaPredicted RBP17.85■□□□□ 0.45
PHRF1-203ENST00000416188 RTN1Q16799 776 aa17.85■□□□□ 0.45
PHRF1-203ENST00000416188 KLHL40Q2TBA0 621 aa17.85■□□□□ 0.45
PHRF1-203ENST00000416188 SULF1Q8IWU6 871 aa17.85■□□□□ 0.45
PHRF1-203ENST00000416188 DCPSQ96C86 337 aaKnown RBP17.85■□□□□ 0.45
PHRF1-203ENST00000416188 GBP3Q9H0R5 595 aa17.85■□□□□ 0.45
PHRF1-203ENST00000416188 SPATA31A6Q5VVP1 1343 aa17.85■□□□□ 0.45
PHRF1-203ENST00000416188 RBM8AQ9Y5S9 174 aaKnown RBP17.85■□□□□ 0.45
PHRF1-203ENST00000416188 ERICH4A6NGS2 130 aa17.85■□□□□ 0.45
PHRF1-203ENST00000416188 ARHGEF10LQ9HCE6 1279 aa17.85■□□□□ 0.45
PHRF1-203ENST00000416188 YEATS4O95619 227 aa17.84■□□□□ 0.45
PHRF1-203ENST00000416188 CETN2P41208 172 aa17.84■□□□□ 0.45
PHRF1-203ENST00000416188 CCDC102BQ68D86 513 aa17.84■□□□□ 0.45
PHRF1-203ENST00000416188 GIMAP6Q6P9H5 292 aa17.84■□□□□ 0.45
PHRF1-203ENST00000416188 ESYT1Q9BSJ8 1104 aa17.84■□□□□ 0.45
PHRF1-203ENST00000416188 MFSD14BQ5SR56 506 aa17.84■□□□□ 0.45
PHRF1-203ENST00000416188 DHX37Q8IY37 1157 aaKnown RBP17.84■□□□□ 0.45
PHRF1-203ENST00000416188 TTF2Q9UNY4 1162 aaKnown RBP17.84■□□□□ 0.45
PHRF1-203ENST00000416188 ZYXQ15942 572 aaKnown RBP17.84■□□□□ 0.45
PHRF1-203ENST00000416188 TNNI3KQ59H18 835 aa17.84■□□□□ 0.45
PHRF1-203ENST00000416188 CSADQ9Y600 493 aa17.84■□□□□ 0.45
PHRF1-203ENST00000416188 FPGT-TNNI3KV9GXZ4 949 aa17.84■□□□□ 0.45
PHRF1-203ENST00000416188 PALLDQ8WX93 1383 aa17.84■□□□□ 0.45
PHRF1-203ENST00000416188 KIF20AO95235 890 aa17.84■□□□□ 0.45
PHRF1-203ENST00000416188 ZSCAN22P10073 491 aaPredicted RBP17.84■□□□□ 0.45
PHRF1-203ENST00000416188 NAPAP54920 295 aa17.84■□□□□ 0.45
PHRF1-203ENST00000416188 GOLGA6L7A0A1B0GV03 622 aa17.83■□□□□ 0.45
PHRF1-203ENST00000416188 ZBTB7AO95365 584 aa17.83■□□□□ 0.45
PHRF1-203ENST00000416188 PIGBQ92521 554 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms