RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 C16orf71Q8IYS4 520 aaPredicted RBP17.65■□□□□ 0.42
SGCE-202ENST00000415788 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.65■□□□□ 0.42
SGCE-202ENST00000415788 ERC2O15083 957 aa17.65■□□□□ 0.42
SGCE-202ENST00000415788 ATP5JP18859 108 aa17.65■□□□□ 0.42
SGCE-202ENST00000415788 SKAP1Q86WV1 359 aa17.65■□□□□ 0.42
SGCE-202ENST00000415788 STAP2Q9UGK3 403 aa17.65■□□□□ 0.42
SGCE-202ENST00000415788 COL4A5P29400 1685 aa17.65■□□□□ 0.42
SGCE-202ENST00000415788 YDJCA8MPS7 323 aa17.64■□□□□ 0.41
SGCE-202ENST00000415788 EIF6P56537 245 aaKnown RBP17.64■□□□□ 0.41
SGCE-202ENST00000415788 AOX1Q06278 1338 aa17.63■□□□□ 0.41
SGCE-202ENST00000415788 RASGRF1Q13972 1273 aa17.63■□□□□ 0.41
SGCE-202ENST00000415788 STRIP1Q5VSL9 837 aa17.63■□□□□ 0.41
SGCE-202ENST00000415788 OTUD7AQ8TE49 926 aaPredicted RBP17.63■□□□□ 0.41
SGCE-202ENST00000415788 FAM205AQ6ZU69 1335 aa17.63■□□□□ 0.41
SGCE-202ENST00000415788 USP17L3A6NCW0 530 aa17.63■□□□□ 0.41
SGCE-202ENST00000415788 USP17L4A6NCW7 530 aa17.63■□□□□ 0.41
SGCE-202ENST00000415788 GLRX3O76003 335 aaKnown RBP17.63■□□□□ 0.41
SGCE-202ENST00000415788 PDE1AP54750 535 aa17.63■□□□□ 0.41
SGCE-202ENST00000415788 USP17L1Q7RTZ2 530 aa17.63■□□□□ 0.41
SGCE-202ENST00000415788 OSBPL3Q9H4L5 887 aa17.63■□□□□ 0.41
SGCE-202ENST00000415788 IQSEC3Q9UPP2 1182 aaPredicted RBP17.63■□□□□ 0.41
SGCE-202ENST00000415788 MCAMP43121 646 aa17.62■□□□□ 0.41
SGCE-202ENST00000415788 SLC4A3P48751 1232 aa17.62■□□□□ 0.41
SGCE-202ENST00000415788 TNIP1Q15025 636 aa17.62■□□□□ 0.41
SGCE-202ENST00000415788 TTLL5Q6EMB2 1281 aa17.62■□□□□ 0.41
SGCE-202ENST00000415788 PLEKHM2Q8IWE5 1019 aa17.62■□□□□ 0.41
SGCE-202ENST00000415788 SPATA5Q8NB90 893 aa17.62■□□□□ 0.41
SGCE-202ENST00000415788 WDR66Q8TBY9 1149 aa17.62■□□□□ 0.41
SGCE-202ENST00000415788 TBC1D22AQ8WUA7 517 aa17.62■□□□□ 0.41
SGCE-202ENST00000415788 SBF1O95248 1867 aa17.62■□□□□ 0.41
SGCE-202ENST00000415788 GOLGB1Q14789 3259 aaKnown RBP17.61■□□□□ 0.41
SGCE-202ENST00000415788 FKBP1AP62942 108 aaKnown RBP17.61■□□□□ 0.41
SGCE-202ENST00000415788 GTF2IP78347 998 aa17.61■□□□□ 0.41
SGCE-202ENST00000415788 CIAPIN1Q6FI81 312 aa17.61■□□□□ 0.41
SGCE-202ENST00000415788 HMG20BQ9P0W2 317 aa17.61■□□□□ 0.41
SGCE-202ENST00000415788 CXCL9Q07325 125 aa17.61■□□□□ 0.41
SGCE-202ENST00000415788 SCARF1Q14162 830 aa17.61■□□□□ 0.41
SGCE-202ENST00000415788 FAM43AQ8N2R8 423 aa17.61■□□□□ 0.41
SGCE-202ENST00000415788 ZGPATQ8N5A5 531 aaKnown RBP17.61■□□□□ 0.41
SGCE-202ENST00000415788 PI4K2BQ8TCG2 481 aa17.61■□□□□ 0.41
SGCE-202ENST00000415788 MYO3BQ8WXR4 1341 aa17.6■□□□□ 0.41
SGCE-202ENST00000415788 SALL1Q9NSC2 1324 aa17.6■□□□□ 0.41
SGCE-202ENST00000415788 DICER1Q9UPY3 1922 aaKnown RBP17.6■□□□□ 0.41
SGCE-202ENST00000415788 VIL1P09327 827 aaKnown RBP17.6■□□□□ 0.41
SGCE-202ENST00000415788 CHAF1AQ13111 956 aaPredicted RBP17.6■□□□□ 0.41
SGCE-202ENST00000415788 HAUS7Q99871 368 aa17.6■□□□□ 0.41
SGCE-202ENST00000415788 COL1A1P02452 1464 aaPredicted RBP17.59■□□□□ 0.41
SGCE-202ENST00000415788 IGSF3O75054 1194 aa17.59■□□□□ 0.41
SGCE-202ENST00000415788 RAD17O75943 681 aa17.59■□□□□ 0.41
SGCE-202ENST00000415788 DACT2Q5SW24 774 aa17.59■□□□□ 0.41
SGCE-202ENST00000415788 DPY19L2Q6NUT2 758 aa17.59■□□□□ 0.41
SGCE-202ENST00000415788 FBXW7Q969H0 707 aa17.59■□□□□ 0.41
SGCE-202ENST00000415788 BOLA2Q9H3K6 86 aa17.59■□□□□ 0.41
SGCE-202ENST00000415788 KCNQ5Q9NR82 932 aa17.59■□□□□ 0.41
SGCE-202ENST00000415788 PSMD14O00487 310 aa17.58■□□□□ 0.41
SGCE-202ENST00000415788 MFSD14BQ5SR56 506 aa17.58■□□□□ 0.41
SGCE-202ENST00000415788 TSHZ3Q63HK5 1081 aa17.58■□□□□ 0.41
SGCE-202ENST00000415788 GPC2Q8N158 579 aa17.58■□□□□ 0.41
SGCE-202ENST00000415788 SUGT1Q9Y2Z0 365 aa17.58■□□□□ 0.41
SGCE-202ENST00000415788 ZNF541Q9H0D2 1346 aa17.58■□□□□ 0.41
SGCE-202ENST00000415788 RPS12P25398 132 aaKnown RBP17.58■□□□□ 0.4
SGCE-202ENST00000415788 TTF1Q15361 905 aaPredicted RBP17.58■□□□□ 0.4
SGCE-202ENST00000415788 RSBN1LQ6PCB5 846 aaPredicted RBP17.58■□□□□ 0.4
SGCE-202ENST00000415788 ZAP70P43403 619 aa17.57■□□□□ 0.4
SGCE-202ENST00000415788 BECN1Q14457 450 aa17.57■□□□□ 0.4
SGCE-202ENST00000415788 CCDC88AQ3V6T2 1871 aa17.57■□□□□ 0.4
SGCE-202ENST00000415788 PI16Q6UXB8 463 aa17.57■□□□□ 0.4
SGCE-202ENST00000415788 TIAM2Q8IVF5 1701 aa17.57■□□□□ 0.4
SGCE-202ENST00000415788 AGBL3Q8NEM8 1001 aa17.57■□□□□ 0.4
SGCE-202ENST00000415788 SNRKQ9NRH2 765 aa17.57■□□□□ 0.4
SGCE-202ENST00000415788 SPTY2D1Q68D10 685 aaPredicted RBP17.56■□□□□ 0.4
SGCE-202ENST00000415788 DNAJC2Q99543 621 aaKnown RBP17.56■□□□□ 0.4
SGCE-202ENST00000415788 JAG2Q9Y219 1238 aa17.56■□□□□ 0.4
SGCE-202ENST00000415788 CYP2E1P05181 493 aaPredicted RBP17.56■□□□□ 0.4
SGCE-202ENST00000415788 RGS3P49796 1198 aa17.56■□□□□ 0.4
SGCE-202ENST00000415788 MMP14P50281 582 aa17.56■□□□□ 0.4
SGCE-202ENST00000415788 PAG1Q9NWQ8 432 aa17.56■□□□□ 0.4
SGCE-202ENST00000415788 GLTPD2A6NH11 291 aa17.55■□□□□ 0.4
SGCE-202ENST00000415788 DPF2Q92785 391 aa17.55■□□□□ 0.4
SGCE-202ENST00000415788 ABCF2Q9UG63 623 aa17.55■□□□□ 0.4
SGCE-202ENST00000415788 GJA3Q9Y6H8 435 aa17.55■□□□□ 0.4
SGCE-202ENST00000415788 SCN9AQ15858 1988 aa17.55■□□□□ 0.4
SGCE-202ENST00000415788 GOLIM4O00461 696 aa17.54■□□□□ 0.4
SGCE-202ENST00000415788 CERS5Q8N5B7 392 aa17.54■□□□□ 0.4
SGCE-202ENST00000415788 MAST3O60307 1309 aa17.54■□□□□ 0.4
SGCE-202ENST00000415788 CHD4Q14839 1912 aa17.54■□□□□ 0.4
SGCE-202ENST00000415788 PSME4Q14997 1843 aa17.54■□□□□ 0.4
SGCE-202ENST00000415788 LDHBP07195 334 aaKnown RBP17.54■□□□□ 0.4
SGCE-202ENST00000415788 TMED8Q6PL24 325 aaPredicted RBP17.54■□□□□ 0.4
SGCE-202ENST00000415788 GMLQ99445 158 aa17.54■□□□□ 0.4
SGCE-202ENST00000415788 LRP2BPQ9P2M1 347 aa17.54■□□□□ 0.4
SGCE-202ENST00000415788 TTC22Q5TAA0 569 aa17.53■□□□□ 0.4
SGCE-202ENST00000415788 EVI5LQ96CN4 794 aa17.53■□□□□ 0.4
SGCE-202ENST00000415788 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.53■□□□□ 0.4
SGCE-202ENST00000415788 AKAP11Q9UKA4 1901 aa17.52■□□□□ 0.4
SGCE-202ENST00000415788 MYH13Q9UKX3 1938 aa17.52■□□□□ 0.4
SGCE-202ENST00000415788 DDNO94850 711 aaPredicted RBP17.52■□□□□ 0.4
SGCE-202ENST00000415788 MAP3K12Q12852 859 aa17.52■□□□□ 0.4
SGCE-202ENST00000415788 LRRFIP1Q32MZ4 808 aaKnown RBP17.52■□□□□ 0.4
SGCE-202ENST00000415788 TBC1D9Q6ZT07 1266 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms