RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 FAM212AQ96EL1 285 aa9.02□□□□□ -0.96
SIK3-203ENST00000415541 UPF3BQ9BZI7 483 aaKnown RBP9.02□□□□□ -0.96
SIK3-203ENST00000415541 KCND1Q9NSA2 647 aa9.02□□□□□ -0.96
SIK3-203ENST00000415541 WDR17Q8IZU2 1322 aa9.02□□□□□ -0.97
SIK3-203ENST00000415541 BIRC2Q13490 618 aa9.02□□□□□ -0.97
SIK3-203ENST00000415541 MPHOSPH8Q99549 860 aa9.02□□□□□ -0.97
SIK3-203ENST00000415541 VPS18Q9P253 973 aa9.02□□□□□ -0.97
SIK3-203ENST00000415541 KIF24Q5T7B8 1368 aa9.02□□□□□ -0.97
SIK3-203ENST00000415541 PSDA5PKW4 1024 aaPredicted RBP9.02□□□□□ -0.97
SIK3-203ENST00000415541 ERLIN1O75477 346 aa9.02□□□□□ -0.97
SIK3-203ENST00000415541 HOXB7P09629 217 aa9.02□□□□□ -0.97
SIK3-203ENST00000415541 KRT85P78386 507 aa9.02□□□□□ -0.97
SIK3-203ENST00000415541 UBXN6Q9BZV1 441 aa9.02□□□□□ -0.97
SIK3-203ENST00000415541 BICC1Q9H694 974 aaKnown RBP9.02□□□□□ -0.97
SIK3-203ENST00000415541 ASAP1Q9ULH1 1129 aa9.02□□□□□ -0.97
SIK3-203ENST00000415541 GLRX3O76003 335 aaKnown RBP9.01□□□□□ -0.97
SIK3-203ENST00000415541 URI1O94763 535 aaPredicted RBP9.01□□□□□ -0.97
SIK3-203ENST00000415541 LRRFIP1Q32MZ4 808 aaKnown RBP9.01□□□□□ -0.97
SIK3-203ENST00000415541 NBPF9Q3BBW0 867 aa9.01□□□□□ -0.97
SIK3-203ENST00000415541 CC2D1AQ6P1N0 951 aaPredicted RBP9.01□□□□□ -0.97
SIK3-203ENST00000415541 SIRT2Q8IXJ6 389 aa9.01□□□□□ -0.97
SIK3-203ENST00000415541 TBC1D22AQ8WUA7 517 aa9.01□□□□□ -0.97
SIK3-203ENST00000415541 ZSCAN16Q9H4T2 348 aaPredicted RBP9.01□□□□□ -0.97
SIK3-203ENST00000415541 SLIT1O75093 1534 aa9.01□□□□□ -0.97
SIK3-203ENST00000415541 EVCP57679 992 aa9.01□□□□□ -0.97
SIK3-203ENST00000415541 IRX1P78414 480 aaPredicted RBP9.01□□□□□ -0.97
SIK3-203ENST00000415541 FAM182BQ5T319 152 aa9.01□□□□□ -0.97
SIK3-203ENST00000415541 CCDC150Q8NCX0 1101 aa9.01□□□□□ -0.97
SIK3-203ENST00000415541 RPAP1Q9BWH6 1393 aaPredicted RBP9.01□□□□□ -0.97
SIK3-203ENST00000415541 TEX13AQ9BXU3 409 aaPredicted RBP9.01□□□□□ -0.97
SIK3-203ENST00000415541 SNRKQ9NRH2 765 aa9.01□□□□□ -0.97
SIK3-203ENST00000415541 BSDC1Q9NW68 430 aaPredicted RBP9.01□□□□□ -0.97
SIK3-203ENST00000415541 USP27XA6NNY8 438 aa9.01□□□□□ -0.97
SIK3-203ENST00000415541 MPHOSPH10O00566 681 aaKnown RBP9.01□□□□□ -0.97
SIK3-203ENST00000415541 NF2P35240 595 aa9.01□□□□□ -0.97
SIK3-203ENST00000415541 METTL24Q5JXM2 366 aa9.01□□□□□ -0.97
SIK3-203ENST00000415541 TTLL7Q6ZT98 887 aa9.01□□□□□ -0.97
SIK3-203ENST00000415541 REXO1L1PQ8IX06 675 aa9.01□□□□□ -0.97
SIK3-203ENST00000415541 JMYQ8N9B5 988 aa9.01□□□□□ -0.97
SIK3-203ENST00000415541 STAG1Q8WVM7 1258 aa9.01□□□□□ -0.97
SIK3-203ENST00000415541 SEC31AO94979 1220 aaKnown RBP9□□□□□ -0.97
SIK3-203ENST00000415541 IFIT5Q13325 482 aaKnown RBP9□□□□□ -0.97
SIK3-203ENST00000415541 CAMK4Q16566 473 aa9□□□□□ -0.97
SIK3-203ENST00000415541 FAM89AQ96GI7 184 aa9□□□□□ -0.97
SIK3-203ENST00000415541 SGSM3Q96HU1 749 aa9□□□□□ -0.97
SIK3-203ENST00000415541 MAP2P11137 1827 aaKnown RBP9□□□□□ -0.97
SIK3-203ENST00000415541 KNDC1Q76NI1 1749 aa9□□□□□ -0.97
SIK3-203ENST00000415541 C3P01024 1663 aa9□□□□□ -0.97
SIK3-203ENST00000415541 RGS12O14924 1447 aa9□□□□□ -0.97
SIK3-203ENST00000415541 POTEB2H3BUK9 544 aa9□□□□□ -0.97
SIK3-203ENST00000415541 NEDD9Q14511 834 aa9□□□□□ -0.97
SIK3-203ENST00000415541 SARM1Q6SZW1 724 aa9□□□□□ -0.97
SIK3-203ENST00000415541 POTEDQ86YR6 584 aa9□□□□□ -0.97
SIK3-203ENST00000415541 ECHDC1Q9NTX5 307 aa9□□□□□ -0.97
SIK3-203ENST00000415541 DNAI1Q9UI46 699 aa9□□□□□ -0.97
SIK3-203ENST00000415541 UBR1Q8IWV7 1749 aa9□□□□□ -0.97
SIK3-203ENST00000415541 PHLPP2Q6ZVD8 1323 aa9□□□□□ -0.97
SIK3-203ENST00000415541 PPFIA4O75335 1185 aa9□□□□□ -0.97
SIK3-203ENST00000415541 TBC1D8O95759 1140 aa9□□□□□ -0.97
SIK3-203ENST00000415541 BRD3Q15059 726 aa9□□□□□ -0.97
SIK3-203ENST00000415541 TTC39AQ5SRH9 613 aa9□□□□□ -0.97
SIK3-203ENST00000415541 CKAP2LQ8IYA6 745 aa9□□□□□ -0.97
SIK3-203ENST00000415541 ERCC4Q92889 916 aaPredicted RBP9□□□□□ -0.97
SIK3-203ENST00000415541 SUCLG2Q96I99 432 aa9□□□□□ -0.97
SIK3-203ENST00000415541 LARP6Q9BRS8 491 aaKnown RBP9□□□□□ -0.97
SIK3-203ENST00000415541 IMPACTQ9P2X3 320 aa9□□□□□ -0.97
SIK3-203ENST00000415541 FBXO3Q9UK99 471 aa9□□□□□ -0.97
SIK3-203ENST00000415541 CCDC144BQ3MJ40 725 aa8.99□□□□□ -0.97
SIK3-203ENST00000415541 LDHAL6AQ6ZMR3 332 aa8.99□□□□□ -0.97
SIK3-203ENST00000415541 HDXQ7Z353 690 aa8.99□□□□□ -0.97
SIK3-203ENST00000415541 CCDC144CPQ8IYA2 1237 aa8.99□□□□□ -0.97
SIK3-203ENST00000415541 SOS1Q07889 1333 aaPredicted RBP8.99□□□□□ -0.97
SIK3-203ENST00000415541 TTC41PQ6P2S7 1318 aa8.99□□□□□ -0.97
SIK3-203ENST00000415541 DLG5Q8TDM6 1919 aa8.99□□□□□ -0.97
SIK3-203ENST00000415541 CCDC189A1A4V9 331 aa8.99□□□□□ -0.97
SIK3-203ENST00000415541 KCNQ4P56696 695 aa8.99□□□□□ -0.97
SIK3-203ENST00000415541 ETF1P62495 437 aaKnown RBP8.99□□□□□ -0.97
SIK3-203ENST00000415541 ZKSCAN8Q15776 578 aaPredicted RBP8.99□□□□□ -0.97
SIK3-203ENST00000415541 CCDC93Q567U6 631 aa8.99□□□□□ -0.97
SIK3-203ENST00000415541 METTL22Q9BUU2 404 aaPredicted RBP8.99□□□□□ -0.97
SIK3-203ENST00000415541 VEZTQ9HBM0 779 aa8.99□□□□□ -0.97
SIK3-203ENST00000415541 GNL3LQ9NVN8 582 aaKnown RBP8.99□□□□□ -0.97
SIK3-203ENST00000415541 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.99□□□□□ -0.972e-6■■□□□ 12.3
SIK3-203ENST00000415541 NRXN3Q9Y4C0 1643 aa8.99□□□□□ -0.97
SIK3-203ENST00000415541 G3V3G9 751 aa8.99□□□□□ -0.97
SIK3-203ENST00000415541 NEBLO76041 1014 aa8.99□□□□□ -0.97
SIK3-203ENST00000415541 SFPQP23246 707 aaKnown RBP eCLIP8.99□□□□□ -0.973e-7■■■□□ 17.4
SIK3-203ENST00000415541 BEND3Q5T5X7 828 aa8.99□□□□□ -0.97
SIK3-203ENST00000415541 DCAF8Q5TAQ9 597 aa8.99□□□□□ -0.97
SIK3-203ENST00000415541 NBPF5PQ86XG9 351 aaPredicted RBP8.99□□□□□ -0.97
SIK3-203ENST00000415541 DZIP3Q86Y13 1208 aaKnown RBP8.99□□□□□ -0.97
SIK3-203ENST00000415541 SGSM2O43147 1006 aa8.98□□□□□ -0.97
SIK3-203ENST00000415541 SYT1P21579 422 aa8.98□□□□□ -0.97
SIK3-203ENST00000415541 TSGA10IPQ3SY00 556 aa8.98□□□□□ -0.97
SIK3-203ENST00000415541 FAM43BQ6ZT52 329 aaPredicted RBP8.98□□□□□ -0.97
SIK3-203ENST00000415541 PAIP2Q9BPZ3 127 aaKnown RBP8.98□□□□□ -0.97
SIK3-203ENST00000415541 CARD6Q9BX69 1037 aa8.98□□□□□ -0.97
SIK3-203ENST00000415541 NAT10Q9H0A0 1025 aaKnown RBP8.98□□□□□ -0.97
SIK3-203ENST00000415541 GBP3Q9H0R5 595 aa8.98□□□□□ -0.97
SIK3-203ENST00000415541 ERVV-2B6SEH9 535 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms