RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 DLK2Q6UY11 383 aa10.75□□□□□ -0.69
HERPUD2-203ENST00000413517 KLHDC4Q8TBB5 520 aa10.75□□□□□ -0.69
HERPUD2-203ENST00000413517 DPF2Q92785 391 aa10.75□□□□□ -0.69
HERPUD2-203ENST00000413517 KLRG1Q96E93 195 aa10.75□□□□□ -0.69
HERPUD2-203ENST00000413517 MEIS3Q99687 375 aa10.75□□□□□ -0.69
HERPUD2-203ENST00000413517 LARP6Q9BRS8 491 aaKnown RBP10.75□□□□□ -0.69
HERPUD2-203ENST00000413517 API5Q9BZZ5 524 aaKnown RBP10.75□□□□□ -0.69
HERPUD2-203ENST00000413517 ANKRD2Q9GZV1 360 aa10.75□□□□□ -0.69
HERPUD2-203ENST00000413517 PGAP2Q9UHJ9 254 aa10.75□□□□□ -0.69
HERPUD2-203ENST00000413517 ASTN2O75129 1339 aaPredicted RBP10.75□□□□□ -0.69
HERPUD2-203ENST00000413517 KIF16BQ96L93 1317 aa10.75□□□□□ -0.69
HERPUD2-203ENST00000413517 PDE4AP27815 886 aa10.74□□□□□ -0.69
HERPUD2-203ENST00000413517 TBC1D10BQ4KMP7 808 aaPredicted RBP10.74□□□□□ -0.69
HERPUD2-203ENST00000413517 DACT2Q5SW24 774 aa10.74□□□□□ -0.69
HERPUD2-203ENST00000413517 RSBN1LQ6PCB5 846 aaPredicted RBP10.74□□□□□ -0.69
HERPUD2-203ENST00000413517 LDHAL6AQ6ZMR3 332 aa10.74□□□□□ -0.69
HERPUD2-203ENST00000413517 C15orf52Q6ZUT6 534 aaKnown RBP10.74□□□□□ -0.69
HERPUD2-203ENST00000413517 PODNQ7Z5L7 613 aa10.74□□□□□ -0.69
HERPUD2-203ENST00000413517 GLIS2Q9BZE0 524 aaPredicted RBP10.74□□□□□ -0.69
HERPUD2-203ENST00000413517 RIPOR2Q9Y4F9 1068 aa10.74□□□□□ -0.69
HERPUD2-203ENST00000413517 USP17L3A6NCW0 530 aa10.73□□□□□ -0.69
HERPUD2-203ENST00000413517 USP17L4A6NCW7 530 aa10.73□□□□□ -0.69
HERPUD2-203ENST00000413517 G3V3G9 751 aa10.73□□□□□ -0.69
HERPUD2-203ENST00000413517 PLIN1O60240 522 aa10.73□□□□□ -0.69
HERPUD2-203ENST00000413517 RPS12P25398 132 aaKnown RBP10.73□□□□□ -0.69
HERPUD2-203ENST00000413517 PDE4DQ08499 809 aa10.73□□□□□ -0.69
HERPUD2-203ENST00000413517 TAF7LQ5H9L4 462 aa10.73□□□□□ -0.69
HERPUD2-203ENST00000413517 INTS3Q68E01 1043 aaKnown RBP10.73□□□□□ -0.69
HERPUD2-203ENST00000413517 USP17L1Q7RTZ2 530 aa10.73□□□□□ -0.69
HERPUD2-203ENST00000413517 VGLL2Q8N8G2 317 aa10.73□□□□□ -0.69
HERPUD2-203ENST00000413517 ZNF579Q8NAF0 562 aaKnown RBP10.73□□□□□ -0.69
HERPUD2-203ENST00000413517 ARHGAP45Q92619 1136 aa10.73□□□□□ -0.69
HERPUD2-203ENST00000413517 COA1Q9GZY4 146 aa10.73□□□□□ -0.69
HERPUD2-203ENST00000413517 TSPYL2Q9H2G4 693 aaPredicted RBP10.73□□□□□ -0.69
HERPUD2-203ENST00000413517 C1orf115Q9H7X2 142 aa10.73□□□□□ -0.69
HERPUD2-203ENST00000413517 CD209Q9NNX6 404 aa10.73□□□□□ -0.69
HERPUD2-203ENST00000413517 CNNM1Q9NRU3 951 aa10.73□□□□□ -0.69
HERPUD2-203ENST00000413517 LRRFIP2Q9Y608 721 aaKnown RBP10.73□□□□□ -0.69
HERPUD2-203ENST00000413517 H7C1D1 291 aa10.72□□□□□ -0.69
HERPUD2-203ENST00000413517 TRIM66O15016 1216 aa10.72□□□□□ -0.69
HERPUD2-203ENST00000413517 UBTFL1P0CB47 393 aaPredicted RBP10.72□□□□□ -0.69
HERPUD2-203ENST00000413517 KCNJ4P48050 445 aa10.72□□□□□ -0.69
HERPUD2-203ENST00000413517 ZNF280AP59817 542 aaPredicted RBP10.72□□□□□ -0.69
HERPUD2-203ENST00000413517 RBM26Q5T8P6 1007 aaKnown RBP10.72□□□□□ -0.69
HERPUD2-203ENST00000413517 CST9Q5W186 159 aa10.72□□□□□ -0.69
HERPUD2-203ENST00000413517 CERS5Q8N5B7 392 aa10.72□□□□□ -0.69
HERPUD2-203ENST00000413517 JMYQ8N9B5 988 aa10.72□□□□□ -0.69
HERPUD2-203ENST00000413517 AGBL3Q8NEM8 1001 aa10.72□□□□□ -0.69
HERPUD2-203ENST00000413517 CLUAP1Q96AJ1 413 aa10.72□□□□□ -0.69
HERPUD2-203ENST00000413517 THSD7BQ9C0I4 1608 aa10.72□□□□□ -0.69
HERPUD2-203ENST00000413517 TMEM88BA6NKF7 163 aa10.71□□□□□ -0.69
HERPUD2-203ENST00000413517 GTF2IP78347 998 aa10.71□□□□□ -0.69
HERPUD2-203ENST00000413517 CNTNAP1P78357 1384 aa10.71□□□□□ -0.69
HERPUD2-203ENST00000413517 PTPN12Q05209 780 aaKnown RBP10.71□□□□□ -0.69
HERPUD2-203ENST00000413517 MKRN3Q13064 507 aaKnown RBP10.71□□□□□ -0.69
HERPUD2-203ENST00000413517 KIF4BQ2VIQ3 1234 aa10.71□□□□□ -0.69
HERPUD2-203ENST00000413517 STRIP1Q5VSL9 837 aa10.71□□□□□ -0.69
HERPUD2-203ENST00000413517 ATF7IPQ6VMQ6 1270 aa10.71□□□□□ -0.69
HERPUD2-203ENST00000413517 ATG9AQ7Z3C6 839 aa10.71□□□□□ -0.69
HERPUD2-203ENST00000413517 FRAT1Q92837 279 aaPredicted RBP10.71□□□□□ -0.69
HERPUD2-203ENST00000413517 MKRN1Q9UHC7 482 aaKnown RBP10.71□□□□□ -0.69
HERPUD2-203ENST00000413517 RLBP1P12271 317 aa10.7□□□□□ -0.7
HERPUD2-203ENST00000413517 IL1R1P14778 569 aa10.7□□□□□ -0.7
HERPUD2-203ENST00000413517 GYG1P46976 350 aa10.7□□□□□ -0.7
HERPUD2-203ENST00000413517 UBE4AQ14139 1066 aa10.7□□□□□ -0.7
HERPUD2-203ENST00000413517 TTLL5Q6EMB2 1281 aa10.7□□□□□ -0.7
HERPUD2-203ENST00000413517 POTEHQ6S545 545 aa10.7□□□□□ -0.7
HERPUD2-203ENST00000413517 EFCAB3Q8N7B9 438 aa10.7□□□□□ -0.7
HERPUD2-203ENST00000413517 FBXW7Q969H0 707 aa10.7□□□□□ -0.7
HERPUD2-203ENST00000413517 GGA3Q9NZ52 723 aa10.7□□□□□ -0.7
HERPUD2-203ENST00000413517 PA2G4Q9UQ80 394 aaKnown RBP10.7□□□□□ -0.7
HERPUD2-203ENST00000413517 JAG2Q9Y219 1238 aa10.7□□□□□ -0.7
HERPUD2-203ENST00000413517 AOX1Q06278 1338 aa10.69□□□□□ -0.7
HERPUD2-203ENST00000413517 MROH5Q6ZUA9 1318 aa10.69□□□□□ -0.7
HERPUD2-203ENST00000413517 ADM5C9JUS6 153 aa10.69□□□□□ -0.7
HERPUD2-203ENST00000413517 EYA2O00167 538 aa10.69□□□□□ -0.7
HERPUD2-203ENST00000413517 USP17L8P0C7I0 530 aa10.69□□□□□ -0.7
HERPUD2-203ENST00000413517 USP48Q86UV5 1035 aa10.69□□□□□ -0.7
HERPUD2-203ENST00000413517 TMEM57Q8N5G2 664 aa10.69□□□□□ -0.7
HERPUD2-203ENST00000413517 DDX27Q96GQ7 796 aaKnown RBP10.69□□□□□ -0.7
HERPUD2-203ENST00000413517 FAM84BQ96KN1 310 aaPredicted RBP10.69□□□□□ -0.7
HERPUD2-203ENST00000413517 MYOZ2Q9NPC6 264 aa10.69□□□□□ -0.7
HERPUD2-203ENST00000413517 SCAF8Q9UPN6 1271 aaKnown RBP10.69□□□□□ -0.7
HERPUD2-203ENST00000413517 PCDHAC2Q9Y5I4 1007 aa10.69□□□□□ -0.7
HERPUD2-203ENST00000413517 COL1A1P02452 1464 aaPredicted RBP10.68□□□□□ -0.7
HERPUD2-203ENST00000413517 RASSF10A6NK89 507 aa10.68□□□□□ -0.7
HERPUD2-203ENST00000413517 PDE8BO95263 885 aa10.68□□□□□ -0.7
HERPUD2-203ENST00000413517 FGFR2P21802 821 aa10.68□□□□□ -0.7
HERPUD2-203ENST00000413517 VEGFBP49765 207 aa10.68□□□□□ -0.7
HERPUD2-203ENST00000413517 CAMK2BQ13554 666 aa10.68□□□□□ -0.7
HERPUD2-203ENST00000413517 SCARF1Q14162 830 aa10.68□□□□□ -0.7
HERPUD2-203ENST00000413517 NBPF9Q3BBW0 867 aa10.68□□□□□ -0.7
HERPUD2-203ENST00000413517 METTL24Q5JXM2 366 aa10.68□□□□□ -0.7
HERPUD2-203ENST00000413517 ZKSCAN2Q63HK3 967 aa10.68□□□□□ -0.7
HERPUD2-203ENST00000413517 CDC37L1Q7L3B6 337 aa10.68□□□□□ -0.7
HERPUD2-203ENST00000413517 ZNF804AQ7Z570 1209 aa10.68□□□□□ -0.7
HERPUD2-203ENST00000413517 KIAA0825Q8IV33 1275 aa10.68□□□□□ -0.7
HERPUD2-203ENST00000413517 TDRD7Q8NHU6 1098 aaKnown RBP10.68□□□□□ -0.7
HERPUD2-203ENST00000413517 ZBED3Q96IU2 234 aaPredicted RBP10.68□□□□□ -0.7
HERPUD2-203ENST00000413517 SIL1Q9H173 461 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms