RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 AKAP11Q9UKA4 1901 aa31.59■■■□□ 2.65
RHBDD3-203ENST00000413137 TRIM6-TRIM34B2RNG4 842 aa31.58■■■□□ 2.65
RHBDD3-203ENST00000413137 CYP2E1P05181 493 aaPredicted RBP31.58■■■□□ 2.65
RHBDD3-203ENST00000413137 LTBP3Q9NS15 1303 aa31.57■■■□□ 2.64
RHBDD3-203ENST00000413137 FRAT2O75474 233 aaPredicted RBP31.57■■■□□ 2.64
RHBDD3-203ENST00000413137 IARSP41252 1262 aaKnown RBP31.57■■■□□ 2.64
RHBDD3-203ENST00000413137 TBC1D9Q6ZT07 1266 aa31.57■■■□□ 2.64
RHBDD3-203ENST00000413137 RILPL2Q969X0 211 aa31.57■■■□□ 2.64
RHBDD3-203ENST00000413137 PAG1Q9NWQ8 432 aa31.57■■■□□ 2.64
RHBDD3-203ENST00000413137 CHAF1AQ13111 956 aaPredicted RBP31.56■■■□□ 2.64
RHBDD3-203ENST00000413137 LARGE2Q8N3Y3 721 aa31.56■■■□□ 2.64
RHBDD3-203ENST00000413137 DENND2AQ9ULE3 1009 aa31.56■■■□□ 2.64
RHBDD3-203ENST00000413137 ECE2O60344 883 aa31.56■■■□□ 2.64
RHBDD3-203ENST00000413137 G3V3G9 751 aa31.55■■■□□ 2.64
RHBDD3-203ENST00000413137 SEMA3EO15041 775 aa31.55■■■□□ 2.64
RHBDD3-203ENST00000413137 DCAF8Q5TAQ9 597 aa31.55■■■□□ 2.64
RHBDD3-203ENST00000413137 PIH1D3Q9NQM4 214 aaKnown RBP31.55■■■□□ 2.64
RHBDD3-203ENST00000413137 YDJCA8MPS7 323 aa31.54■■■□□ 2.64
RHBDD3-203ENST00000413137 CHD4Q14839 1912 aa31.53■■■□□ 2.64
RHBDD3-203ENST00000413137 GPR162Q16538 588 aa31.53■■■□□ 2.64
RHBDD3-203ENST00000413137 VPS33BQ9H267 617 aa31.53■■■□□ 2.64
RHBDD3-203ENST00000413137 ZBTB22O15209 634 aa31.52■■■□□ 2.64
RHBDD3-203ENST00000413137 EVI5LQ96CN4 794 aa31.52■■■□□ 2.64
RHBDD3-203ENST00000413137 PODNQ7Z5L7 613 aa31.51■■■□□ 2.64
RHBDD3-203ENST00000413137 CNTROBQ8N137 903 aa31.51■■■□□ 2.64
RHBDD3-203ENST00000413137 CHGBP05060 677 aa31.51■■■□□ 2.63
RHBDD3-203ENST00000413137 GTF2IP78347 998 aa31.51■■■□□ 2.63
RHBDD3-203ENST00000413137 PDS5AQ29RF7 1337 aaKnown RBP31.49■■■□□ 2.63
RHBDD3-203ENST00000413137 MXD3Q9BW11 206 aa31.49■■■□□ 2.63
RHBDD3-203ENST00000413137 GRIK5Q16478 980 aa31.48■■■□□ 2.63
RHBDD3-203ENST00000413137 SLFNL1Q499Z3 407 aa31.48■■■□□ 2.63
RHBDD3-203ENST00000413137 KBTBD3Q8NAB2 608 aa31.48■■■□□ 2.63
RHBDD3-203ENST00000413137 FBXW7Q969H0 707 aa31.48■■■□□ 2.63
RHBDD3-203ENST00000413137 FSD1Q9BTV5 496 aa31.48■■■□□ 2.63
RHBDD3-203ENST00000413137 FAM205AQ6ZU69 1335 aa31.48■■■□□ 2.63
RHBDD3-203ENST00000413137 CCDC88AQ3V6T2 1871 aa31.48■■■□□ 2.63
RHBDD3-203ENST00000413137 NIM1KQ8IY84 436 aa31.47■■■□□ 2.63
RHBDD3-203ENST00000413137 SCN9AQ15858 1988 aa31.47■■■□□ 2.63
RHBDD3-203ENST00000413137 TTLL5Q6EMB2 1281 aa31.47■■■□□ 2.63
RHBDD3-203ENST00000413137 ABCF2Q9UG63 623 aa31.47■■■□□ 2.63
RHBDD3-203ENST00000413137 ZNRF3Q9ULT6 936 aa31.46■■■□□ 2.63
RHBDD3-203ENST00000413137 WDR66Q8TBY9 1149 aa31.45■■■□□ 2.63
RHBDD3-203ENST00000413137 IDH1O75874 414 aaKnown RBP31.44■■■□□ 2.62
RHBDD3-203ENST00000413137 RAD17O75943 681 aa31.44■■■□□ 2.62
RHBDD3-203ENST00000413137 TTF1Q15361 905 aaPredicted RBP31.44■■■□□ 2.62
RHBDD3-203ENST00000413137 CERS5Q8N5B7 392 aa31.44■■■□□ 2.62
RHBDD3-203ENST00000413137 MYH13Q9UKX3 1938 aa31.44■■■□□ 2.62
RHBDD3-203ENST00000413137 LMNB1P20700 586 aa31.43■■■□□ 2.62
RHBDD3-203ENST00000413137 PRDX5P30044 214 aa31.43■■■□□ 2.62
RHBDD3-203ENST00000413137 MFSD14BQ5SR56 506 aa31.43■■■□□ 2.62
RHBDD3-203ENST00000413137 JDP2Q8WYK2 163 aa31.43■■■□□ 2.62
RHBDD3-203ENST00000413137 SALL1Q9NSC2 1324 aa31.43■■■□□ 2.62
RHBDD3-203ENST00000413137 DACT2Q5SW24 774 aa31.43■■■□□ 2.62
RHBDD3-203ENST00000413137 LRP2BPQ9P2M1 347 aa31.43■■■□□ 2.62
RHBDD3-203ENST00000413137 MYO5AQ9Y4I1 1855 aaKnown RBP31.42■■■□□ 2.62
RHBDD3-203ENST00000413137 USP17L3A6NCW0 530 aa31.42■■■□□ 2.62
RHBDD3-203ENST00000413137 USP17L4A6NCW7 530 aa31.42■■■□□ 2.62
RHBDD3-203ENST00000413137 STRIP1Q5VSL9 837 aa31.42■■■□□ 2.62
RHBDD3-203ENST00000413137 USP17L1Q7RTZ2 530 aa31.42■■■□□ 2.62
RHBDD3-203ENST00000413137 CHMLP26374 656 aa31.41■■■□□ 2.62
RHBDD3-203ENST00000413137 ZNF384Q8TF68 577 aa31.41■■■□□ 2.62
RHBDD3-203ENST00000413137 CDC45O75419 566 aa31.4■■■□□ 2.62
RHBDD3-203ENST00000413137 CXCL9Q07325 125 aa31.4■■■□□ 2.62
RHBDD3-203ENST00000413137 C8orf34Q49A92 452 aa31.4■■■□□ 2.62
RHBDD3-203ENST00000413137 RAI14Q9P0K7 980 aa31.4■■■□□ 2.62
RHBDD3-203ENST00000413137 SBF1O95248 1867 aa31.39■■■□□ 2.62
RHBDD3-203ENST00000413137 FZD9O00144 591 aa31.39■■■□□ 2.61
RHBDD3-203ENST00000413137 PSMD14O00487 310 aa31.39■■■□□ 2.61
RHBDD3-203ENST00000413137 GRIN3BO60391 1043 aa31.39■■■□□ 2.61
RHBDD3-203ENST00000413137 SLC9C2Q5TAH2 1124 aa31.39■■■□□ 2.61
RHBDD3-203ENST00000413137 ERICH6Q7L0X2 663 aa31.39■■■□□ 2.61
RHBDD3-203ENST00000413137 TBC1D22AQ8WUA7 517 aa31.39■■■□□ 2.61
RHBDD3-203ENST00000413137 FAM227BQ96M60 508 aa31.39■■■□□ 2.61
RHBDD3-203ENST00000413137 ZNF646O15015 1829 aaPredicted RBP31.38■■■□□ 2.61
RHBDD3-203ENST00000413137 IL25Q9H293 177 aa31.38■■■□□ 2.61
RHBDD3-203ENST00000413137 AK9Q5TCS8 1911 aa31.37■■■□□ 2.61
RHBDD3-203ENST00000413137 RNF113AO15541 343 aaKnown RBP31.37■■■□□ 2.61
RHBDD3-203ENST00000413137 LDHBP07195 334 aaKnown RBP31.37■■■□□ 2.61
RHBDD3-203ENST00000413137 PDE6AP16499 860 aa31.37■■■□□ 2.61
RHBDD3-203ENST00000413137 MECOMQ03112 1051 aa31.37■■■□□ 2.61
RHBDD3-203ENST00000413137 MAP3K12Q12852 859 aa31.37■■■□□ 2.61
RHBDD3-203ENST00000413137 MAGEB6Q8N7X4 407 aa31.37■■■□□ 2.61
RHBDD3-203ENST00000413137 RNF181Q9P0P0 153 aa31.37■■■□□ 2.61
RHBDD3-203ENST00000413137 TCRBV5S4A2TA0A5A2 114 aa31.36■■■□□ 2.61
RHBDD3-203ENST00000413137 ADD2P35612 726 aa31.36■■■□□ 2.61
RHBDD3-203ENST00000413137 NMIQ13287 307 aaPredicted RBP31.36■■■□□ 2.61
RHBDD3-203ENST00000413137 C9orf131Q5VYM1 1079 aa31.36■■■□□ 2.61
RHBDD3-203ENST00000413137 ZGPATQ8N5A5 531 aaKnown RBP31.36■■■□□ 2.61
RHBDD3-203ENST00000413137 NSUN4Q96CB9 384 aaKnown RBP31.36■■■□□ 2.61
RHBDD3-203ENST00000413137 DOCK2Q92608 1830 aa31.36■■■□□ 2.61
RHBDD3-203ENST00000413137 F8W031 263 aaPredicted RBP31.35■■■□□ 2.61
RHBDD3-203ENST00000413137 VIL1P09327 827 aaKnown RBP31.35■■■□□ 2.61
RHBDD3-203ENST00000413137 CWC27Q6UX04 472 aaKnown RBP31.35■■■□□ 2.61
RHBDD3-203ENST00000413137 SEC62Q99442 399 aaKnown RBP31.35■■■□□ 2.61
RHBDD3-203ENST00000413137 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.35■■■□□ 2.61
RHBDD3-203ENST00000413137 ZNF541Q9H0D2 1346 aa31.35■■■□□ 2.61
RHBDD3-203ENST00000413137 ZNF532Q9HCE3 1301 aa31.35■■■□□ 2.61
RHBDD3-203ENST00000413137 A0A0D9SFI3 127 aa31.34■■■□□ 2.61
RHBDD3-203ENST00000413137 SPTY2D1Q68D10 685 aaPredicted RBP31.34■■■□□ 2.61
RHBDD3-203ENST00000413137 ADGRA1Q86SQ6 560 aa31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms