RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 FAM212AQ96EL1 285 aa9.68□□□□□ -0.86
PBRM1-209ENST00000412587 DDX21Q9NR30 783 aaKnown RBP eCLIP9.68□□□□□ -0.86
PBRM1-209ENST00000412587 SEC63Q9UGP8 760 aaKnown RBP9.68□□□□□ -0.86
PBRM1-209ENST00000412587 SSBP05455 408 aaKnown RBP eCLIP9.68□□□□□ -0.86
PBRM1-209ENST00000412587 MUM1L1Q5H9M0 696 aa9.68□□□□□ -0.86
PBRM1-209ENST00000412587 CCDC181Q5TID7 509 aa9.68□□□□□ -0.86
PBRM1-209ENST00000412587 TADA2BQ86TJ2 420 aa9.68□□□□□ -0.86
PBRM1-209ENST00000412587 MRFAP1L1Q96HT8 127 aa9.68□□□□□ -0.86
PBRM1-209ENST00000412587 UTP14AQ9BVJ6 771 aaKnown RBP9.68□□□□□ -0.86
PBRM1-209ENST00000412587 RTCBQ9Y3I0 505 aaKnown RBP9.68□□□□□ -0.86
PBRM1-209ENST00000412587 SLC12A7Q9Y666 1083 aa9.68□□□□□ -0.86
PBRM1-209ENST00000412587 SOS1Q07889 1333 aaPredicted RBP9.68□□□□□ -0.86
PBRM1-209ENST00000412587 CTAGE15A4D2H0 777 aa9.68□□□□□ -0.86
PBRM1-209ENST00000412587 EIF3CLB5ME19 914 aaKnown RBP9.68□□□□□ -0.86
PBRM1-209ENST00000412587 CTAGE8P0CG41 777 aa9.68□□□□□ -0.86
PBRM1-209ENST00000412587 PPP2R3AQ06190 1150 aa9.68□□□□□ -0.86
PBRM1-209ENST00000412587 CTAGE6Q86UF2 777 aa9.68□□□□□ -0.86
PBRM1-209ENST00000412587 SPATS2Q86XZ4 545 aaKnown RBP9.68□□□□□ -0.86
PBRM1-209ENST00000412587 CTAGE4Q8IX94 777 aa9.68□□□□□ -0.86
PBRM1-209ENST00000412587 CCDC82Q8N4S0 544 aa9.68□□□□□ -0.86
PBRM1-209ENST00000412587 ARMC2Q8NEN0 867 aa9.68□□□□□ -0.86
PBRM1-209ENST00000412587 MICAL1Q8TDZ2 1067 aa9.68□□□□□ -0.86
PBRM1-209ENST00000412587 EIF3CQ99613 913 aaKnown RBP9.68□□□□□ -0.86
PBRM1-209ENST00000412587 BMP2KQ9NSY1 1161 aaPredicted RBP9.68□□□□□ -0.86
PBRM1-209ENST00000412587 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.68□□□□□ -0.862e-8■■□□□ 13.8
PBRM1-209ENST00000412587 CWF19L2Q2TBE0 894 aaKnown RBP9.67□□□□□ -0.86
PBRM1-209ENST00000412587 RNF216Q9NWF9 866 aaPredicted RBP9.67□□□□□ -0.86
PBRM1-209ENST00000412587 BUB1BO60566 1050 aaPredicted RBP9.67□□□□□ -0.86
PBRM1-209ENST00000412587 PDE1AP54750 535 aa9.67□□□□□ -0.86
PBRM1-209ENST00000412587 TYRO3Q06418 890 aa9.67□□□□□ -0.86
PBRM1-209ENST00000412587 TPTE2Q6XPS3 522 aa9.67□□□□□ -0.86
PBRM1-209ENST00000412587 GPR161Q8N6U8 529 aaKnown RBP9.67□□□□□ -0.86
PBRM1-209ENST00000412587 C8orf76Q96K31 380 aa9.67□□□□□ -0.86
PBRM1-209ENST00000412587 DACH1Q9UI36 760 aa9.67□□□□□ -0.86
PBRM1-209ENST00000412587 NDUFAB1O14561 156 aa9.67□□□□□ -0.86
PBRM1-209ENST00000412587 CCDC175P0C221 793 aa9.67□□□□□ -0.86
PBRM1-209ENST00000412587 MED4Q9NPJ6 270 aa9.67□□□□□ -0.86
PBRM1-209ENST00000412587 MYO5CQ9NQX4 1742 aa9.67□□□□□ -0.86
PBRM1-209ENST00000412587 PTPRTO14522 1441 aa9.67□□□□□ -0.86
PBRM1-209ENST00000412587 ARHGEF10O15013 1369 aa9.67□□□□□ -0.86
PBRM1-209ENST00000412587 GOLGA8BA8MQT2 603 aa9.67□□□□□ -0.86
PBRM1-209ENST00000412587 STX6O43752 255 aa9.67□□□□□ -0.86
PBRM1-209ENST00000412587 ANAPC15P60006 121 aa9.67□□□□□ -0.86
PBRM1-209ENST00000412587 ZNF790Q6PG37 636 aa9.67□□□□□ -0.86
PBRM1-209ENST00000412587 ATRIPQ8WXE1 791 aa9.67□□□□□ -0.86
PBRM1-209ENST00000412587 ZFYP08048 801 aaPredicted RBP9.66□□□□□ -0.86
PBRM1-209ENST00000412587 HAND2P61296 217 aa9.66□□□□□ -0.86
PBRM1-209ENST00000412587 CCDC96Q2M329 555 aa9.66□□□□□ -0.86
PBRM1-209ENST00000412587 SPTLC3Q9NUV7 552 aa9.66□□□□□ -0.86
PBRM1-209ENST00000412587 ZNHIT6Q9NWK9 470 aaKnown RBP9.66□□□□□ -0.86
PBRM1-209ENST00000412587 PYCARDQ9ULZ3 195 aa9.66□□□□□ -0.86
PBRM1-209ENST00000412587 TNNQ9UQP3 1299 aa9.66□□□□□ -0.86
PBRM1-209ENST00000412587 TTC36A6NLP5 189 aa9.66□□□□□ -0.86
PBRM1-209ENST00000412587 SDSP20132 328 aa9.66□□□□□ -0.86
PBRM1-209ENST00000412587 WHAMMP3Q1A5X7 153 aa9.66□□□□□ -0.86
PBRM1-209ENST00000412587 SPECC1LQ69YQ0 1117 aa9.66□□□□□ -0.86
PBRM1-209ENST00000412587 FBXO38Q6PIJ6 1188 aa9.66□□□□□ -0.86
PBRM1-209ENST00000412587 DDX17Q92841 729 aaKnown RBP9.66□□□□□ -0.86
PBRM1-209ENST00000412587 TMX3Q96JJ7 454 aa9.66□□□□□ -0.86
PBRM1-209ENST00000412587 NYXQ9GZU5 481 aa9.66□□□□□ -0.86
PBRM1-209ENST00000412587 BABAM1Q9NWV8 329 aa9.66□□□□□ -0.86
PBRM1-209ENST00000412587 CEP131Q9UPN4 1083 aa9.66□□□□□ -0.86
PBRM1-209ENST00000412587 GOLGA8AA7E2F4 631 aa9.66□□□□□ -0.86
PBRM1-209ENST00000412587 BRD3Q15059 726 aa9.66□□□□□ -0.86
PBRM1-209ENST00000412587 SEPT14Q6ZU15 432 aa9.66□□□□□ -0.86
PBRM1-209ENST00000412587 PHAXQ9H814 394 aaKnown RBP9.66□□□□□ -0.86
PBRM1-209ENST00000412587 PA2G4Q9UQ80 394 aaKnown RBP9.66□□□□□ -0.86
PBRM1-209ENST00000412587 CFAP74Q9C0B2 1584 aa9.66□□□□□ -0.86
PBRM1-209ENST00000412587 LRRC23Q53EV4 343 aaPredicted RBP9.66□□□□□ -0.86
PBRM1-209ENST00000412587 GIGYF2Q6Y7W6 1299 aaKnown RBP9.66□□□□□ -0.86
PBRM1-209ENST00000412587 CATIPQ7Z7H3 387 aa9.66□□□□□ -0.86
PBRM1-209ENST00000412587 LMNTD2Q8IXW0 634 aa9.66□□□□□ -0.86
PBRM1-209ENST00000412587 ZNF710Q8N1W2 664 aa9.66□□□□□ -0.86
PBRM1-209ENST00000412587 TFCP2L1Q9NZI6 479 aa9.66□□□□□ -0.86
PBRM1-209ENST00000412587 IQSEC3Q9UPP2 1182 aaPredicted RBP9.66□□□□□ -0.86
PBRM1-209ENST00000412587 IRS4O14654 1257 aaPredicted RBP9.65□□□□□ -0.86
PBRM1-209ENST00000412587 HSF2BPO75031 334 aa9.65□□□□□ -0.86
PBRM1-209ENST00000412587 PNMA6AP0CW24 399 aaPredicted RBP9.65□□□□□ -0.86
PBRM1-209ENST00000412587 SAAL1Q96ER3 474 aa9.65□□□□□ -0.86
PBRM1-209ENST00000412587 CARD6Q9BX69 1037 aa9.65□□□□□ -0.86
PBRM1-209ENST00000412587 HMG20BQ9P0W2 317 aa9.65□□□□□ -0.86
PBRM1-209ENST00000412587 TRIM66O15016 1216 aa9.65□□□□□ -0.86
PBRM1-209ENST00000412587 ZSCAN22P10073 491 aaPredicted RBP9.65□□□□□ -0.86
PBRM1-209ENST00000412587 PDE4BQ07343 736 aa9.65□□□□□ -0.86
PBRM1-209ENST00000412587 NBPF9Q3BBW0 867 aa9.65□□□□□ -0.86
PBRM1-209ENST00000412587 CCT2P78371 535 aaKnown RBP9.65□□□□□ -0.87
PBRM1-209ENST00000412587 NEK1Q96PY6 1258 aa9.65□□□□□ -0.87
PBRM1-209ENST00000412587 TCHPQ9BT92 498 aa9.65□□□□□ -0.87
PBRM1-209ENST00000412587 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.65□□□□□ -0.87
PBRM1-209ENST00000412587 CNPY2Q9Y2B0 182 aa9.65□□□□□ -0.87
PBRM1-209ENST00000412587 TSPY2A6NKD2 308 aa9.64□□□□□ -0.87
PBRM1-209ENST00000412587 ZNF75DP51815 510 aa9.64□□□□□ -0.87
PBRM1-209ENST00000412587 GUCY1B3Q02153 619 aa9.64□□□□□ -0.87
PBRM1-209ENST00000412587 TMEM67Q5HYA8 995 aa9.64□□□□□ -0.87
PBRM1-209ENST00000412587 MFSD6Q6ZSS7 791 aa9.64□□□□□ -0.87
PBRM1-209ENST00000412587 FAM114A1Q8IWE2 563 aa9.64□□□□□ -0.87
PBRM1-209ENST00000412587 CRNKL1Q9BZJ0 848 aaKnown RBP9.64□□□□□ -0.87
PBRM1-209ENST00000412587 GOPCQ9HD26 462 aa9.64□□□□□ -0.87
PBRM1-209ENST00000412587 EFCAB8A8MWE9 144 aa9.64□□□□□ -0.87
PBRM1-209ENST00000412587 CHUKO15111 745 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms