RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 SUGT1Q9Y2Z0 365 aa24.53■■□□□ 1.52
PTPA-208ENST00000411917 TRIM6-TRIM34B2RNG4 842 aa24.52■■□□□ 1.52
PTPA-208ENST00000411917 CDC45O75419 566 aa24.52■■□□□ 1.52
PTPA-208ENST00000411917 ZFYP08048 801 aaPredicted RBP24.52■■□□□ 1.52
PTPA-208ENST00000411917 DNAJC2Q99543 621 aaKnown RBP24.52■■□□□ 1.52
PTPA-208ENST00000411917 PPIP5K2O43314 1243 aa24.51■■□□□ 1.51
PTPA-208ENST00000411917 IARSP41252 1262 aaKnown RBP24.51■■□□□ 1.51
PTPA-208ENST00000411917 GPR101Q96P66 508 aaPredicted RBP24.51■■□□□ 1.51
PTPA-208ENST00000411917 GOLIM4O00461 696 aa24.5■■□□□ 1.51
PTPA-208ENST00000411917 ZSCAN25Q6NSZ9 544 aa24.5■■□□□ 1.51
PTPA-208ENST00000411917 CASC1Q6TDU7 716 aa24.5■■□□□ 1.51
PTPA-208ENST00000411917 RILPL2Q969X0 211 aa24.5■■□□□ 1.51
PTPA-208ENST00000411917 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.5■■□□□ 1.51
PTPA-208ENST00000411917 FRAT2O75474 233 aaPredicted RBP24.49■■□□□ 1.51
PTPA-208ENST00000411917 AOC3Q16853 763 aa24.49■■□□□ 1.51
PTPA-208ENST00000411917 SPTY2D1Q68D10 685 aaPredicted RBP24.49■■□□□ 1.51
PTPA-208ENST00000411917 RIMBP2O15034 1052 aa24.48■■□□□ 1.51
PTPA-208ENST00000411917 STRIP1Q5VSL9 837 aa24.48■■□□□ 1.51
PTPA-208ENST00000411917 PI16Q6UXB8 463 aa24.48■■□□□ 1.51
PTPA-208ENST00000411917 FSD1Q9BTV5 496 aa24.48■■□□□ 1.51
PTPA-208ENST00000411917 DOCK2Q92608 1830 aa24.47■■□□□ 1.51
PTPA-208ENST00000411917 RAD50Q92878 1312 aa24.47■■□□□ 1.51
PTPA-208ENST00000411917 G3V3G9 751 aa24.47■■□□□ 1.51
PTPA-208ENST00000411917 ECE2O60344 883 aa24.47■■□□□ 1.51
PTPA-208ENST00000411917 CHMLP26374 656 aa24.47■■□□□ 1.51
PTPA-208ENST00000411917 MAP3K12Q12852 859 aa24.47■■□□□ 1.51
PTPA-208ENST00000411917 C8orf34Q49A92 452 aa24.47■■□□□ 1.51
PTPA-208ENST00000411917 DCAF8Q5TAQ9 597 aa24.47■■□□□ 1.51
PTPA-208ENST00000411917 LARGE2Q8N3Y3 721 aa24.47■■□□□ 1.51
PTPA-208ENST00000411917 ANTXR1Q9H6X2 564 aa24.47■■□□□ 1.51
PTPA-208ENST00000411917 SNRKQ9NRH2 765 aa24.47■■□□□ 1.51
PTPA-208ENST00000411917 ZNF277Q9NRM2 450 aaPredicted RBP24.47■■□□□ 1.51
PTPA-208ENST00000411917 UBE3CQ15386 1083 aa24.46■■□□□ 1.51
PTPA-208ENST00000411917 MYH13Q9UKX3 1938 aa24.45■■□□□ 1.51
PTPA-208ENST00000411917 EPB41L2O43491 1005 aaKnown RBP24.45■■□□□ 1.5
PTPA-208ENST00000411917 MAP4K4O95819 1239 aaPredicted RBP24.45■■□□□ 1.5
PTPA-208ENST00000411917 MMP14P50281 582 aa24.45■■□□□ 1.5
PTPA-208ENST00000411917 TBC1D9Q6ZT07 1266 aa24.45■■□□□ 1.5
PTPA-208ENST00000411917 RUFY2Q8WXA3 655 aa24.45■■□□□ 1.5
PTPA-208ENST00000411917 EDC3Q96F86 508 aaKnown RBP24.45■■□□□ 1.5
PTPA-208ENST00000411917 PIH1D3Q9NQM4 214 aaKnown RBP24.45■■□□□ 1.5
PTPA-208ENST00000411917 ZNRF3Q9ULT6 936 aa24.45■■□□□ 1.5
PTPA-208ENST00000411917 MYO3BQ8WXR4 1341 aa24.44■■□□□ 1.5
PTPA-208ENST00000411917 RNF113AO15541 343 aaKnown RBP24.44■■□□□ 1.5
PTPA-208ENST00000411917 GRIN3BO60391 1043 aa24.44■■□□□ 1.5
PTPA-208ENST00000411917 NIM1KQ8IY84 436 aa24.44■■□□□ 1.5
PTPA-208ENST00000411917 JDP2Q8WYK2 163 aa24.44■■□□□ 1.5
PTPA-208ENST00000411917 IQSEC3Q9UPP2 1182 aaPredicted RBP24.44■■□□□ 1.5
PTPA-208ENST00000411917 NDUFB9Q9Y6M9 179 aa24.44■■□□□ 1.5
PTPA-208ENST00000411917 USP17L3A6NCW0 530 aa24.43■■□□□ 1.5
PTPA-208ENST00000411917 USP17L4A6NCW7 530 aa24.43■■□□□ 1.5
PTPA-208ENST00000411917 LMNB1P20700 586 aa24.43■■□□□ 1.5
PTPA-208ENST00000411917 ADD2P35612 726 aa24.43■■□□□ 1.5
PTPA-208ENST00000411917 DOK7Q18PE1 504 aa24.43■■□□□ 1.5
PTPA-208ENST00000411917 TTLL5Q6EMB2 1281 aa24.43■■□□□ 1.5
PTPA-208ENST00000411917 USP17L1Q7RTZ2 530 aa24.43■■□□□ 1.5
PTPA-208ENST00000411917 MRIQ9BWK5 157 aa24.43■■□□□ 1.5
PTPA-208ENST00000411917 DBNDD1Q9H9R9 158 aa24.43■■□□□ 1.5
PTPA-208ENST00000411917 HELLSQ9NRZ9 838 aa24.43■■□□□ 1.5
PTPA-208ENST00000411917 AK9Q5TCS8 1911 aa24.43■■□□□ 1.5
PTPA-208ENST00000411917 PSME4Q14997 1843 aa24.42■■□□□ 1.5
PTPA-208ENST00000411917 YBX3P16989 372 aaKnown RBP eCLIP24.42■■□□□ 1.59e-8■□□□□ 11.1
PTPA-208ENST00000411917 ERICH6Q7L0X2 663 aa24.42■■□□□ 1.5
PTPA-208ENST00000411917 BACH2Q9BYV9 841 aa24.42■■□□□ 1.5
PTPA-208ENST00000411917 DIAPH3Q9NSV4 1193 aa24.42■■□□□ 1.5
PTPA-208ENST00000411917 LRP2BPQ9P2M1 347 aa24.42■■□□□ 1.5
PTPA-208ENST00000411917 COL4A5P29400 1685 aa24.42■■□□□ 1.5
PTPA-208ENST00000411917 MAST3O60307 1309 aa24.41■■□□□ 1.5
PTPA-208ENST00000411917 YDJCA8MPS7 323 aa24.41■■□□□ 1.5
PTPA-208ENST00000411917 GTF2IP78347 998 aa24.41■■□□□ 1.5
PTPA-208ENST00000411917 CHAF1AQ13111 956 aaPredicted RBP24.41■■□□□ 1.5
PTPA-208ENST00000411917 MFSD14BQ5SR56 506 aa24.41■■□□□ 1.5
PTPA-208ENST00000411917 ZMYM1Q5SVZ6 1142 aa24.41■■□□□ 1.5
PTPA-208ENST00000411917 DACT2Q5SW24 774 aa24.41■■□□□ 1.5
PTPA-208ENST00000411917 MAST2Q6P0Q8 1798 aa24.41■■□□□ 1.5
PTPA-208ENST00000411917 SRCAPQ6ZRS2 3230 aa24.4■■□□□ 1.5
PTPA-208ENST00000411917 ZC3H4Q9UPT8 1303 aaKnown RBP24.4■■□□□ 1.5
PTPA-208ENST00000411917 TCRBV5S4A2TA0A5A2 114 aa24.4■■□□□ 1.5
PTPA-208ENST00000411917 FZD9O00144 591 aa24.4■■□□□ 1.5
PTPA-208ENST00000411917 IDH1O75874 414 aaKnown RBP24.4■■□□□ 1.5
PTPA-208ENST00000411917 LDHBP07195 334 aaKnown RBP24.4■■□□□ 1.5
PTPA-208ENST00000411917 VIL1P09327 827 aaKnown RBP24.4■■□□□ 1.5
PTPA-208ENST00000411917 PDE6AP16499 860 aa24.4■■□□□ 1.5
PTPA-208ENST00000411917 GSTO1P78417 241 aa24.4■■□□□ 1.5
PTPA-208ENST00000411917 CERS3Q8IU89 383 aa24.4■■□□□ 1.5
PTPA-208ENST00000411917 APPBP2Q92624 585 aa24.4■■□□□ 1.5
PTPA-208ENST00000411917 FAM163AQ96GL9 167 aaPredicted RBP24.4■■□□□ 1.5
PTPA-208ENST00000411917 ZNF646O15015 1829 aaPredicted RBP24.4■■□□□ 1.5
PTPA-208ENST00000411917 GOLGB1Q14789 3259 aaKnown RBP24.39■■□□□ 1.5
PTPA-208ENST00000411917 SGSM2O43147 1006 aa24.39■■□□□ 1.49
PTPA-208ENST00000411917 HDLBPQ00341 1268 aaKnown RBP24.39■■□□□ 1.49
PTPA-208ENST00000411917 SLC9C2Q5TAH2 1124 aa24.39■■□□□ 1.49
PTPA-208ENST00000411917 ARHGAP27Q6ZUM4 889 aa24.39■■□□□ 1.49
PTPA-208ENST00000411917 SLF2Q8IX21 1173 aa24.39■■□□□ 1.49
PTPA-208ENST00000411917 NSUN4Q96CB9 384 aaKnown RBP24.39■■□□□ 1.49
PTPA-208ENST00000411917 ABCF2Q9UG63 623 aa24.39■■□□□ 1.49
PTPA-208ENST00000411917 WWC3Q9ULE0 1092 aa24.39■■□□□ 1.49
PTPA-208ENST00000411917 CHD4Q14839 1912 aa24.39■■□□□ 1.49
PTPA-208ENST00000411917 MFAP1P55081 439 aaKnown RBP24.38■■□□□ 1.49
PTPA-208ENST00000411917 RASSF7Q02833 373 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms