RNA–Protein interactions for RNA: ENST00000409808.6

LIMS2-207, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LIMS2, Length 2,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-207ENST00000409808 SCARF1Q14162 830 aa23.41■■□□□ 1.34
LIMS2-207ENST00000409808 SLFNL1Q499Z3 407 aa23.41■■□□□ 1.34
LIMS2-207ENST00000409808 TTC39AQ5SRH9 613 aa23.41■■□□□ 1.34
LIMS2-207ENST00000409808 PAG1Q9NWQ8 432 aa23.41■■□□□ 1.34
LIMS2-207ENST00000409808 CCDC158Q5M9N0 1113 aa23.41■■□□□ 1.34
LIMS2-207ENST00000409808 LARP6Q9BRS8 491 aaKnown RBP23.41■■□□□ 1.34
LIMS2-207ENST00000409808 COL24A1Q17RW2 1714 aa23.4■■□□□ 1.34
LIMS2-207ENST00000409808 FIBPO43427 364 aa23.39■■□□□ 1.34
LIMS2-207ENST00000409808 FKBP4Q02790 459 aaKnown RBP eCLIP23.39■■□□□ 1.34
LIMS2-207ENST00000409808 ME3Q16798 604 aa23.39■■□□□ 1.34
LIMS2-207ENST00000409808 PI16Q6UXB8 463 aa23.39■■□□□ 1.34
LIMS2-207ENST00000409808 HMG20BQ9P0W2 317 aa23.39■■□□□ 1.34
LIMS2-207ENST00000409808 SLC27A2O14975 620 aa23.39■■□□□ 1.33
LIMS2-207ENST00000409808 IGHMBP2P38935 993 aaKnown RBP23.39■■□□□ 1.33
LIMS2-207ENST00000409808 TSGA10IPQ3SY00 556 aa23.39■■□□□ 1.33
LIMS2-207ENST00000409808 MAP7D2Q96T17 732 aa23.39■■□□□ 1.33
LIMS2-207ENST00000409808 NYXQ9GZU5 481 aa23.39■■□□□ 1.33
LIMS2-207ENST00000409808 RTL9Q8NET4 1388 aa23.39■■□□□ 1.33
LIMS2-207ENST00000409808 APBA3O96018 575 aa23.38■■□□□ 1.33
LIMS2-207ENST00000409808 NFIXQ14938 502 aa23.38■■□□□ 1.33
LIMS2-207ENST00000409808 SLC10A5Q5PT55 438 aa23.38■■□□□ 1.33
LIMS2-207ENST00000409808 POTEAQ6S8J7 498 aa23.38■■□□□ 1.33
LIMS2-207ENST00000409808 ZNF589Q86UQ0 364 aaPredicted RBP23.38■■□□□ 1.33
LIMS2-207ENST00000409808 KBTBD3Q8NAB2 608 aa23.38■■□□□ 1.33
LIMS2-207ENST00000409808 SEC62Q99442 399 aaKnown RBP23.38■■□□□ 1.33
LIMS2-207ENST00000409808 FUCA2Q9BTY2 467 aa23.38■■□□□ 1.33
LIMS2-207ENST00000409808 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.38■■□□□ 1.33
LIMS2-207ENST00000409808 MROH5Q6ZUA9 1318 aa23.38■■□□□ 1.33
LIMS2-207ENST00000409808 DNM1Q05193 864 aaKnown RBP23.38■■□□□ 1.33
LIMS2-207ENST00000409808 SF3B3Q15393 1217 aaKnown RBP23.38■■□□□ 1.33
LIMS2-207ENST00000409808 SASS6Q6UVJ0 657 aa23.38■■□□□ 1.33
LIMS2-207ENST00000409808 TPTE2Q6XPS3 522 aa23.37■■□□□ 1.33
LIMS2-207ENST00000409808 KDM4AO75164 1064 aa23.37■■□□□ 1.33
LIMS2-207ENST00000409808 LARP1BQ659C4 914 aaKnown RBP23.37■■□□□ 1.33
LIMS2-207ENST00000409808 BLOC1S2Q6QNY1 142 aa23.37■■□□□ 1.33
LIMS2-207ENST00000409808 ELP1O95163 1332 aa23.37■■□□□ 1.33
LIMS2-207ENST00000409808 ST3GAL1Q11201 340 aa23.36■■□□□ 1.33
LIMS2-207ENST00000409808 TPCN1Q9ULQ1 816 aa23.36■■□□□ 1.33
LIMS2-207ENST00000409808 NPHP1O15259 732 aa23.36■■□□□ 1.33
LIMS2-207ENST00000409808 ADCY5O95622 1261 aa23.36■■□□□ 1.33
LIMS2-207ENST00000409808 FGFR2P21802 821 aa23.36■■□□□ 1.33
LIMS2-207ENST00000409808 KRT85P78386 507 aa23.36■■□□□ 1.33
LIMS2-207ENST00000409808 PUM3Q15397 648 aaKnown RBP23.36■■□□□ 1.33
LIMS2-207ENST00000409808 CCDC129Q6ZRS4 1044 aa23.36■■□□□ 1.33
LIMS2-207ENST00000409808 MED23Q9ULK4 1368 aa23.35■■□□□ 1.33
LIMS2-207ENST00000409808 DYNC1I1O14576 645 aa23.35■■□□□ 1.33
LIMS2-207ENST00000409808 ADRA2BP18089 450 aa23.35■■□□□ 1.33
LIMS2-207ENST00000409808 ZAP70P43403 619 aa23.35■■□□□ 1.33
LIMS2-207ENST00000409808 CELF1Q92879 486 aaKnown RBP23.35■■□□□ 1.33
LIMS2-207ENST00000409808 USP25Q9UHP3 1055 aa23.35■■□□□ 1.33
LIMS2-207ENST00000409808 VPS37CA5D8V6 355 aaPredicted RBP23.34■■□□□ 1.33
LIMS2-207ENST00000409808 TPM3P06753 285 aa23.34■■□□□ 1.33
LIMS2-207ENST00000409808 GYS1P13807 737 aa23.34■■□□□ 1.33
LIMS2-207ENST00000409808 PHKA1P46020 1223 aa23.34■■□□□ 1.33
LIMS2-207ENST00000409808 CHRNDQ07001 517 aa23.34■■□□□ 1.33
LIMS2-207ENST00000409808 KRT32Q14532 448 aa23.34■■□□□ 1.33
LIMS2-207ENST00000409808 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.34■■□□□ 1.33
LIMS2-207ENST00000409808 CDC5LQ99459 802 aaKnown RBP23.34■■□□□ 1.33
LIMS2-207ENST00000409808 TCHHQ07283 1943 aa23.34■■□□□ 1.33
LIMS2-207ENST00000409808 WTIPA6NIX2 430 aaPredicted RBP23.34■■□□□ 1.33
LIMS2-207ENST00000409808 RPS6KB1P23443 525 aa23.34■■□□□ 1.33
LIMS2-207ENST00000409808 MCAMP43121 646 aa23.34■■□□□ 1.33
LIMS2-207ENST00000409808 LPIN2Q92539 896 aa23.34■■□□□ 1.33
LIMS2-207ENST00000409808 NLRP3Q96P20 1036 aa23.34■■□□□ 1.33
LIMS2-207ENST00000409808 ANKRD18AQ8IVF6 992 aa23.33■■□□□ 1.33
LIMS2-207ENST00000409808 PIBF1Q8WXW3 757 aa23.33■■□□□ 1.33
LIMS2-207ENST00000409808 AKAP11Q9UKA4 1901 aa23.33■■□□□ 1.33
LIMS2-207ENST00000409808 RFX7Q2KHR2 1363 aa23.33■■□□□ 1.33
LIMS2-207ENST00000409808 UQCRHLA0A096LP55 91 aa23.33■■□□□ 1.33
LIMS2-207ENST00000409808 UQCRHP07919 91 aa23.33■■□□□ 1.33
LIMS2-207ENST00000409808 ZNF827Q17R98 1081 aa23.33■■□□□ 1.33
LIMS2-207ENST00000409808 CCDC102BQ68D86 513 aa23.33■■□□□ 1.33
LIMS2-207ENST00000409808 CCDC192P0DO97 292 aa23.32■■□□□ 1.32
LIMS2-207ENST00000409808 MTERF4Q7Z6M4 381 aaKnown RBP23.32■■□□□ 1.32
LIMS2-207ENST00000409808 CARMIL3Q8ND23 1372 aa23.32■■□□□ 1.32
LIMS2-207ENST00000409808 NECAB1Q8N987 351 aa23.32■■□□□ 1.32
LIMS2-207ENST00000409808 TNRC6CQ9HCJ0 1690 aaKnown RBP23.31■■□□□ 1.32
LIMS2-207ENST00000409808 SCAND2PQ9GZW5 306 aaPredicted RBP23.31■■□□□ 1.32
LIMS2-207ENST00000409808 PLSCR1O15162 318 aa23.31■■□□□ 1.32
LIMS2-207ENST00000409808 SLC5A1P13866 664 aa23.31■■□□□ 1.32
LIMS2-207ENST00000409808 GIMAP6Q6P9H5 292 aa23.31■■□□□ 1.32
LIMS2-207ENST00000409808 MCMDC2Q4G0Z9 681 aa23.3■■□□□ 1.32
LIMS2-207ENST00000409808 TFCP2L1Q9NZI6 479 aa23.3■■□□□ 1.32
LIMS2-207ENST00000409808 ARAP2Q8WZ64 1704 aa23.29■■□□□ 1.32
LIMS2-207ENST00000409808 MYO5AQ9Y4I1 1855 aaKnown RBP23.29■■□□□ 1.32
LIMS2-207ENST00000409808 CNBD1Q8NA66 436 aa23.29■■□□□ 1.32
LIMS2-207ENST00000409808 BSDC1Q9NW68 430 aaPredicted RBP23.29■■□□□ 1.32
LIMS2-207ENST00000409808 TM4SF1P30408 202 aa23.28■■□□□ 1.32
LIMS2-207ENST00000409808 MINPP1Q9UNW1 487 aa23.28■■□□□ 1.32
LIMS2-207ENST00000409808 RNF113AO15541 343 aaKnown RBP23.28■■□□□ 1.32
LIMS2-207ENST00000409808 BCAMP50895 628 aa23.28■■□□□ 1.32
LIMS2-207ENST00000409808 PRR5LQ6MZQ0 368 aa23.28■■□□□ 1.32
LIMS2-207ENST00000409808 TICAM2Q86XR7 235 aa23.28■■□□□ 1.32
LIMS2-207ENST00000409808 PRIMPOLQ96LW4 560 aa23.28■■□□□ 1.32
LIMS2-207ENST00000409808 NOLC1Q14978 699 aaKnown RBP eCLIP23.27■■□□□ 1.32
LIMS2-207ENST00000409808 ZMYM1Q5SVZ6 1142 aa23.27■■□□□ 1.32
LIMS2-207ENST00000409808 TTC6Q86TZ1 520 aa23.27■■□□□ 1.32
LIMS2-207ENST00000409808 SLC51AQ86UW1 340 aa23.27■■□□□ 1.32
LIMS2-207ENST00000409808 A0A1B0GUL6 1792 aa23.27■■□□□ 1.32
LIMS2-207ENST00000409808 ARID4AP29374 1257 aaPredicted RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms