RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 GPAA1O43292 621 aa11.81□□□□□ -0.52
CUL1-202ENST00000409469 PIAS4Q8N2W9 510 aaPredicted RBP11.81□□□□□ -0.52
CUL1-202ENST00000409469 ZNF652Q9Y2D9 606 aa11.81□□□□□ -0.52
CUL1-202ENST00000409469 SPATA31A6Q5VVP1 1343 aa11.81□□□□□ -0.52
CUL1-202ENST00000409469 UTRNP46939 3433 aa11.81□□□□□ -0.52
CUL1-202ENST00000409469 RFX7Q2KHR2 1363 aa11.81□□□□□ -0.52
CUL1-202ENST00000409469 E7EWF7 191 aa11.81□□□□□ -0.52
CUL1-202ENST00000409469 STX6O43752 255 aa11.81□□□□□ -0.52
CUL1-202ENST00000409469 GADD45BO75293 160 aaPredicted RBP11.81□□□□□ -0.52
CUL1-202ENST00000409469 FGFR2P21802 821 aa11.81□□□□□ -0.52
CUL1-202ENST00000409469 IGHMBP2P38935 993 aaKnown RBP11.81□□□□□ -0.52
CUL1-202ENST00000409469 STK11IPQ8N1F8 1099 aa11.81□□□□□ -0.52
CUL1-202ENST00000409469 DDX11Q96FC9 970 aa11.81□□□□□ -0.52
CUL1-202ENST00000409469 LRRC4BQ9NT99 713 aa11.81□□□□□ -0.52
CUL1-202ENST00000409469 CNPY2Q9Y2B0 182 aa11.81□□□□□ -0.52
CUL1-202ENST00000409469 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.81□□□□□ -0.52
CUL1-202ENST00000409469 GOLGA6L3A6NEY3 463 aa11.81□□□□□ -0.52
CUL1-202ENST00000409469 FGAP02671 866 aa11.81□□□□□ -0.52
CUL1-202ENST00000409469 GYG1P46976 350 aa11.81□□□□□ -0.52
CUL1-202ENST00000409469 APOBRQ0VD83 1088 aa11.81□□□□□ -0.52
CUL1-202ENST00000409469 IPO4Q8TEX9 1081 aaKnown RBP11.81□□□□□ -0.52
CUL1-202ENST00000409469 LPIN2Q92539 896 aa11.81□□□□□ -0.52
CUL1-202ENST00000409469 ARHGEF1Q92888 912 aaKnown RBP11.81□□□□□ -0.52
CUL1-202ENST00000409469 AKAP11Q9UKA4 1901 aa11.81□□□□□ -0.52
CUL1-202ENST00000409469 ZNF532Q9HCE3 1301 aa11.8□□□□□ -0.52
CUL1-202ENST00000409469 KLRK1P26718 216 aa11.8□□□□□ -0.52
CUL1-202ENST00000409469 CCT2P78371 535 aaKnown RBP11.8□□□□□ -0.52
CUL1-202ENST00000409469 NCOA5Q9HCD5 579 aaKnown RBP11.8□□□□□ -0.52
CUL1-202ENST00000409469 INCENPQ9NQS7 918 aa11.8□□□□□ -0.52
CUL1-202ENST00000409469 MROH5Q6ZUA9 1318 aa11.8□□□□□ -0.52
CUL1-202ENST00000409469 APPP05067 770 aa11.8□□□□□ -0.52
CUL1-202ENST00000409469 XRCC6P12956 609 aaKnown RBP eCLIP11.8□□□□□ -0.52
CUL1-202ENST00000409469 CDC37L1Q7L3B6 337 aa11.8□□□□□ -0.52
CUL1-202ENST00000409469 SPATA5Q8NB90 893 aa11.8□□□□□ -0.52
CUL1-202ENST00000409469 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.8□□□□□ -0.52
CUL1-202ENST00000409469 APPBP2Q92624 585 aa11.8□□□□□ -0.52
CUL1-202ENST00000409469 DSCC1Q9BVC3 393 aa11.8□□□□□ -0.52
CUL1-202ENST00000409469 JAG2Q9Y219 1238 aa11.8□□□□□ -0.52
CUL1-202ENST00000409469 RREB1Q92766 1687 aa11.79□□□□□ -0.52
CUL1-202ENST00000409469 TCHHQ07283 1943 aa11.79□□□□□ -0.52
CUL1-202ENST00000409469 NPHP1O15259 732 aa11.79□□□□□ -0.52
CUL1-202ENST00000409469 ZPR1O75312 459 aa11.79□□□□□ -0.52
CUL1-202ENST00000409469 CLSTN1O94985 981 aa11.79□□□□□ -0.52
CUL1-202ENST00000409469 SLC5A1P13866 664 aa11.79□□□□□ -0.52
CUL1-202ENST00000409469 KLHL40Q2TBA0 621 aa11.79□□□□□ -0.52
CUL1-202ENST00000409469 FAM196AQ6ZSG2 479 aa11.79□□□□□ -0.52
CUL1-202ENST00000409469 NBPF5PQ86XG9 351 aaPredicted RBP11.79□□□□□ -0.52
CUL1-202ENST00000409469 FIBPO43427 364 aa11.79□□□□□ -0.52
CUL1-202ENST00000409469 ZSCAN22P10073 491 aaPredicted RBP11.79□□□□□ -0.52
CUL1-202ENST00000409469 ADD2P35612 726 aa11.79□□□□□ -0.52
CUL1-202ENST00000409469 TSGA10IPQ3SY00 556 aa11.79□□□□□ -0.52
CUL1-202ENST00000409469 MAGEB6Q8N7X4 407 aa11.79□□□□□ -0.52
CUL1-202ENST00000409469 RTCBQ9Y3I0 505 aaKnown RBP11.79□□□□□ -0.52
CUL1-202ENST00000409469 CNTNAP4Q9C0A0 1308 aa11.79□□□□□ -0.52
CUL1-202ENST00000409469 WDR33Q9C0J8 1336 aaKnown RBP11.79□□□□□ -0.52
CUL1-202ENST00000409469 PDE6AP16499 860 aa11.78□□□□□ -0.52
CUL1-202ENST00000409469 MIGA1Q8NAN2 632 aa11.78□□□□□ -0.52
CUL1-202ENST00000409469 SETDB2Q96T68 719 aa11.78□□□□□ -0.52
CUL1-202ENST00000409469 SH2B1Q9NRF2 756 aaPredicted RBP11.78□□□□□ -0.52
CUL1-202ENST00000409469 MTMR6Q9Y217 621 aa11.78□□□□□ -0.52
CUL1-202ENST00000409469 LRP5O75197 1615 aa11.78□□□□□ -0.52
CUL1-202ENST00000409469 FSD2A1L4K1 749 aa11.78□□□□□ -0.52
CUL1-202ENST00000409469 RPS6KA4O75676 772 aa11.78□□□□□ -0.52
CUL1-202ENST00000409469 ARID4AP29374 1257 aaPredicted RBP11.78□□□□□ -0.52
CUL1-202ENST00000409469 DNM1Q05193 864 aaKnown RBP11.78□□□□□ -0.52
CUL1-202ENST00000409469 SCRN1Q12765 414 aa11.78□□□□□ -0.52
CUL1-202ENST00000409469 KRT32Q14532 448 aa11.78□□□□□ -0.52
CUL1-202ENST00000409469 CLEC4GQ6UXB4 293 aa11.78□□□□□ -0.52
CUL1-202ENST00000409469 ZSCAN31Q96LW9 406 aaPredicted RBP11.78□□□□□ -0.52
CUL1-202ENST00000409469 QTRT2Q9H974 415 aaKnown RBP11.78□□□□□ -0.52
CUL1-202ENST00000409469 TMEM63CQ9P1W3 806 aa11.78□□□□□ -0.52
CUL1-202ENST00000409469 NARFQ9UHQ1 456 aa11.78□□□□□ -0.52
CUL1-202ENST00000409469 THSD7AQ9UPZ6 1657 aa11.78□□□□□ -0.52
CUL1-202ENST00000409469 F13A1P00488 732 aa11.77□□□□□ -0.52
CUL1-202ENST00000409469 LARP1BQ659C4 914 aaKnown RBP11.77□□□□□ -0.52
CUL1-202ENST00000409469 USP48Q86UV5 1035 aa11.77□□□□□ -0.52
CUL1-202ENST00000409469 ANKRD18AQ8IVF6 992 aa11.77□□□□□ -0.52
CUL1-202ENST00000409469 ABCF2Q9UG63 623 aa11.77□□□□□ -0.52
CUL1-202ENST00000409469 LAMA4Q16363 1823 aa11.77□□□□□ -0.53
CUL1-202ENST00000409469 PRKAB2O43741 272 aa11.77□□□□□ -0.53
CUL1-202ENST00000409469 TRIM37O94972 964 aa11.77□□□□□ -0.53
CUL1-202ENST00000409469 ARMT1Q9H993 441 aa11.77□□□□□ -0.53
CUL1-202ENST00000409469 RNF216Q9NWF9 866 aaPredicted RBP11.77□□□□□ -0.53
CUL1-202ENST00000409469 BCORQ6W2J9 1755 aa11.77□□□□□ -0.53
CUL1-202ENST00000409469 SMIM22K7EJ46 135 aa11.77□□□□□ -0.53
CUL1-202ENST00000409469 ADRA2BP18089 450 aa11.77□□□□□ -0.53
CUL1-202ENST00000409469 SKOR2Q2VWA4 1001 aaPredicted RBP11.77□□□□□ -0.53
CUL1-202ENST00000409469 ZSCAN23Q3MJ62 389 aa11.77□□□□□ -0.53
CUL1-202ENST00000409469 DHX32Q7L7V1 743 aaKnown RBP11.77□□□□□ -0.53
CUL1-202ENST00000409469 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.77□□□□□ -0.53
CUL1-202ENST00000409469 NBPF3Q9H094 633 aa11.77□□□□□ -0.53
CUL1-202ENST00000409469 RFC4P35249 363 aa11.76□□□□□ -0.53
CUL1-202ENST00000409469 FAM177A1Q8N128 213 aaPredicted RBP11.76□□□□□ -0.53
CUL1-202ENST00000409469 GTF3C6Q969F1 213 aa11.76□□□□□ -0.53
CUL1-202ENST00000409469 AK7Q96M32 723 aa11.76□□□□□ -0.53
CUL1-202ENST00000409469 TFCP2L1Q9NZI6 479 aa11.76□□□□□ -0.53
CUL1-202ENST00000409469 MINPP1Q9UNW1 487 aa11.76□□□□□ -0.53
CUL1-202ENST00000409469 MTMR7Q9Y216 660 aa11.76□□□□□ -0.53
CUL1-202ENST00000409469 TCRBV5S4A2TA0A5A2 114 aa11.76□□□□□ -0.53
CUL1-202ENST00000409469 RAD21O60216 631 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 432.9 ms