RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 OSBPL5Q9H0X9 879 aaPredicted RBP17.99■□□□□ 0.47
LIMS2-205ENST00000409455 FHOD1Q9Y613 1164 aa17.99■□□□□ 0.47
LIMS2-205ENST00000409455 ATP5J2-PTCD1G3V325 749 aa17.99■□□□□ 0.47
LIMS2-205ENST00000409455 NRDCO43847 1150 aa17.99■□□□□ 0.47
LIMS2-205ENST00000409455 SUCLG2Q96I99 432 aa17.99■□□□□ 0.47
LIMS2-205ENST00000409455 FSD1Q9BTV5 496 aa17.99■□□□□ 0.47
LIMS2-205ENST00000409455 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.98■□□□□ 0.47
LIMS2-205ENST00000409455 A0A0D9SFI3 127 aa17.98■□□□□ 0.47
LIMS2-205ENST00000409455 TULP2O00295 520 aa17.98■□□□□ 0.47
LIMS2-205ENST00000409455 TUBB4AP04350 444 aa17.98■□□□□ 0.47
LIMS2-205ENST00000409455 CLCN6P51797 869 aa17.98■□□□□ 0.47
LIMS2-205ENST00000409455 KRT32Q14532 448 aa17.98■□□□□ 0.47
LIMS2-205ENST00000409455 AOPEPQ8N6M6 819 aa17.98■□□□□ 0.47
LIMS2-205ENST00000409455 CCDC150Q8NCX0 1101 aa17.98■□□□□ 0.47
LIMS2-205ENST00000409455 ARGLU1Q9NWB6 273 aaPredicted RBP17.98■□□□□ 0.47
LIMS2-205ENST00000409455 PDE4CQ08493 712 aa17.98■□□□□ 0.47
LIMS2-205ENST00000409455 SYT10Q6XYQ8 523 aa17.98■□□□□ 0.47
LIMS2-205ENST00000409455 PPP1R13BQ96KQ4 1090 aa17.98■□□□□ 0.47
LIMS2-205ENST00000409455 SLC4A9Q96Q91 983 aa17.98■□□□□ 0.47
LIMS2-205ENST00000409455 TSPYL1Q9H0U9 437 aa17.98■□□□□ 0.47
LIMS2-205ENST00000409455 HDAC5Q9UQL6 1122 aa17.98■□□□□ 0.47
LIMS2-205ENST00000409455 HSP90B1P14625 803 aaKnown RBP17.97■□□□□ 0.47
LIMS2-205ENST00000409455 TSGA10IPQ3SY00 556 aa17.97■□□□□ 0.47
LIMS2-205ENST00000409455 TEX35Q5T0J7 233 aa17.97■□□□□ 0.47
LIMS2-205ENST00000409455 ACSBG1Q96GR2 724 aa17.97■□□□□ 0.47
LIMS2-205ENST00000409455 TEX13AQ9BXU3 409 aaPredicted RBP17.97■□□□□ 0.47
LIMS2-205ENST00000409455 NAP1L2Q9ULW6 460 aaPredicted RBP17.97■□□□□ 0.47
LIMS2-205ENST00000409455 TAF6LQ9Y6J9 622 aa17.97■□□□□ 0.47
LIMS2-205ENST00000409455 PSDA5PKW4 1024 aaPredicted RBP17.97■□□□□ 0.47
LIMS2-205ENST00000409455 PNMA6AP0CW24 399 aaPredicted RBP17.97■□□□□ 0.47
LIMS2-205ENST00000409455 FAM98CQ17RN3 349 aaKnown RBP17.97■□□□□ 0.47
LIMS2-205ENST00000409455 ARHGAP29Q52LW3 1261 aa17.97■□□□□ 0.47
LIMS2-205ENST00000409455 E4F1Q66K89 784 aaPredicted RBP17.97■□□□□ 0.47
LIMS2-205ENST00000409455 BICC1Q9H694 974 aaKnown RBP17.97■□□□□ 0.47
LIMS2-205ENST00000409455 MED23Q9ULK4 1368 aa17.97■□□□□ 0.47
LIMS2-205ENST00000409455 BCL9LQ86UU0 1499 aa17.97■□□□□ 0.47
LIMS2-205ENST00000409455 LAMB4A4D0S4 1761 aa17.97■□□□□ 0.47
LIMS2-205ENST00000409455 A0A0G2JS52 829 aa17.96■□□□□ 0.47
LIMS2-205ENST00000409455 FAM160A1Q05DH4 1040 aa17.96■□□□□ 0.47
LIMS2-205ENST00000409455 DHX8Q14562 1220 aaKnown RBP17.96■□□□□ 0.47
LIMS2-205ENST00000409455 CCDC93Q567U6 631 aa17.96■□□□□ 0.47
LIMS2-205ENST00000409455 GOLPH3LQ9H4A5 285 aa17.96■□□□□ 0.47
LIMS2-205ENST00000409455 PA2G4Q9UQ80 394 aaKnown RBP17.96■□□□□ 0.47
LIMS2-205ENST00000409455 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.96■□□□□ 0.47
LIMS2-205ENST00000409455 ITGB4P16144 1822 aa17.96■□□□□ 0.47
LIMS2-205ENST00000409455 SFPQP23246 707 aaKnown RBP eCLIP17.96■□□□□ 0.47
LIMS2-205ENST00000409455 FNBP4Q8N3X1 1017 aaPredicted RBP17.96■□□□□ 0.47
LIMS2-205ENST00000409455 RCOR1Q9UKL0 485 aa17.96■□□□□ 0.47
LIMS2-205ENST00000409455 ZNF330Q9Y3S2 320 aaPredicted RBP17.96■□□□□ 0.47
LIMS2-205ENST00000409455 STARD3NLO95772 234 aa17.95■□□□□ 0.46
LIMS2-205ENST00000409455 TMCO3Q6UWJ1 677 aa17.95■□□□□ 0.46
LIMS2-205ENST00000409455 ZBTB3Q9H5J0 574 aa17.95■□□□□ 0.46
LIMS2-205ENST00000409455 NWD2Q9ULI1 1742 aa17.95■□□□□ 0.46
LIMS2-205ENST00000409455 KCNJ6P48051 423 aa17.95■□□□□ 0.46
LIMS2-205ENST00000409455 ZRSR1Q15695 479 aaKnown RBP17.95■□□□□ 0.46
LIMS2-205ENST00000409455 VPS72Q15906 364 aa17.95■□□□□ 0.46
LIMS2-205ENST00000409455 NBPF11Q86T75 865 aa17.95■□□□□ 0.46
LIMS2-205ENST00000409455 TPM4P67936 248 aa17.94■□□□□ 0.46
LIMS2-205ENST00000409455 IPO4Q8TEX9 1081 aaKnown RBP17.94■□□□□ 0.46
LIMS2-205ENST00000409455 SPATA31A6Q5VVP1 1343 aa17.94■□□□□ 0.46
LIMS2-205ENST00000409455 A0A087WWV3 80 aa17.94■□□□□ 0.46
LIMS2-205ENST00000409455 SMC2O95347 1197 aa17.94■□□□□ 0.46
LIMS2-205ENST00000409455 HNRNPH2P55795 449 aaKnown RBP17.94■□□□□ 0.46
LIMS2-205ENST00000409455 HOMER1Q86YM7 354 aa17.94■□□□□ 0.46
LIMS2-205ENST00000409455 UBXN4Q92575 508 aa17.94■□□□□ 0.46
LIMS2-205ENST00000409455 NEK1Q96PY6 1258 aa17.94■□□□□ 0.46
LIMS2-205ENST00000409455 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.94■□□□□ 0.46
LIMS2-205ENST00000409455 WNK3Q9BYP7 1800 aa17.94■□□□□ 0.46
LIMS2-205ENST00000409455 LRP6O75581 1613 aa17.93■□□□□ 0.46
LIMS2-205ENST00000409455 A0A087WZG4 1122 aa17.93■□□□□ 0.46
LIMS2-205ENST00000409455 ADD1P35611 737 aaKnown RBP17.93■□□□□ 0.46
LIMS2-205ENST00000409455 EPHA10Q5JZY3 1008 aa17.93■□□□□ 0.46
LIMS2-205ENST00000409455 NAA16Q6N069 864 aaPredicted RBP17.93■□□□□ 0.46
LIMS2-205ENST00000409455 ZNF589Q86UQ0 364 aaPredicted RBP17.93■□□□□ 0.46
LIMS2-205ENST00000409455 LRRN4CLQ8ND94 238 aa17.93■□□□□ 0.46
LIMS2-205ENST00000409455 FBXW7Q969H0 707 aa17.93■□□□□ 0.46
LIMS2-205ENST00000409455 ZNF396Q96N95 335 aaPredicted RBP17.93■□□□□ 0.46
LIMS2-205ENST00000409455 CCP110O43303 1012 aa17.93■□□□□ 0.46
LIMS2-205ENST00000409455 CAPN2P17655 700 aa17.93■□□□□ 0.46
LIMS2-205ENST00000409455 HSPA1LP34931 641 aa17.93■□□□□ 0.46
LIMS2-205ENST00000409455 PLA2G4AP47712 749 aa17.93■□□□□ 0.46
LIMS2-205ENST00000409455 ME1P48163 572 aa17.93■□□□□ 0.46
LIMS2-205ENST00000409455 ATL3Q6DD88 541 aa17.93■□□□□ 0.46
LIMS2-205ENST00000409455 Q6ZUG5 572 aa17.93■□□□□ 0.46
LIMS2-205ENST00000409455 UBE3BQ7Z3V4 1068 aa17.93■□□□□ 0.46
LIMS2-205ENST00000409455 TMC6Q7Z403 805 aa17.93■□□□□ 0.46
LIMS2-205ENST00000409455 FSIP1Q8NA03 581 aa17.93■□□□□ 0.46
LIMS2-205ENST00000409455 ENGASEQ8NFI3 743 aa17.93■□□□□ 0.46
LIMS2-205ENST00000409455 FTOQ9C0B1 505 aaKnown RBP eCLIP17.93■□□□□ 0.46
LIMS2-205ENST00000409455 BOLA2Q9H3K6 86 aa17.93■□□□□ 0.46
LIMS2-205ENST00000409455 USP21Q9UK80 565 aa17.93■□□□□ 0.46
LIMS2-205ENST00000409455 EAF2Q96CJ1 260 aaPredicted RBP17.92■□□□□ 0.46
LIMS2-205ENST00000409455 LLPHQ9BRT6 129 aaKnown RBP17.92■□□□□ 0.46
LIMS2-205ENST00000409455 CCDC8Q9H0W5 538 aaPredicted RBP17.92■□□□□ 0.46
LIMS2-205ENST00000409455 CYP19A1P11511 503 aaPredicted RBP17.92■□□□□ 0.46
LIMS2-205ENST00000409455 G3BP1Q13283 466 aaKnown RBP eCLIP17.92■□□□□ 0.46
LIMS2-205ENST00000409455 ARMCX5Q6P1M9 558 aa17.92■□□□□ 0.46
LIMS2-205ENST00000409455 TAF5LO75529 589 aa17.91■□□□□ 0.46
LIMS2-205ENST00000409455 ZRANB2O95218 330 aaKnown RBP eCLIP17.91■□□□□ 0.46
LIMS2-205ENST00000409455 GORABQ5T7V8 394 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms