RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 GZF1Q9H116 711 aaPredicted RBP34.54■■■■□ 3.12
CSNK1E-205ENST00000405675 SH2B1Q9NRF2 756 aaPredicted RBP34.54■■■■□ 3.12
CSNK1E-205ENST00000405675 PNPLA7Q6ZV29 1317 aa34.53■■■■□ 3.12
CSNK1E-205ENST00000405675 FOXP2O15409 715 aa34.53■■■■□ 3.12
CSNK1E-205ENST00000405675 MCTP1Q6DN14 999 aa34.53■■■■□ 3.12
CSNK1E-205ENST00000405675 CELF1Q92879 486 aaKnown RBP34.53■■■■□ 3.12
CSNK1E-205ENST00000405675 TAF1P21675 1872 aa34.53■■■■□ 3.12
CSNK1E-205ENST00000405675 FLAD1Q8NFF5 587 aa34.52■■■■□ 3.12
CSNK1E-205ENST00000405675 DTNBO60941 627 aa34.52■■■■□ 3.12
CSNK1E-205ENST00000405675 NECAB1Q8N987 351 aa34.52■■■■□ 3.12
CSNK1E-205ENST00000405675 ANO8Q9HCE9 1232 aaPredicted RBP34.52■■■■□ 3.12
CSNK1E-205ENST00000405675 TNRC6CQ9HCJ0 1690 aaKnown RBP34.51■■■■□ 3.12
CSNK1E-205ENST00000405675 POLRMTO00411 1230 aaKnown RBP34.51■■■■□ 3.11
CSNK1E-205ENST00000405675 ZSCAN21Q9Y5A6 473 aaPredicted RBP34.51■■■■□ 3.11
CSNK1E-205ENST00000405675 ADD2P35612 726 aa34.5■■■■□ 3.11
CSNK1E-205ENST00000405675 TTF1Q15361 905 aaPredicted RBP34.5■■■■□ 3.11
CSNK1E-205ENST00000405675 TTLL5Q6EMB2 1281 aa34.5■■■■□ 3.11
CSNK1E-205ENST00000405675 DDX24Q9GZR7 859 aaKnown RBP eCLIP34.5■■■■□ 3.113e-7■■■□□ 15.9
CSNK1E-205ENST00000405675 MYH7P12883 1935 aa34.5■■■■□ 3.11
CSNK1E-205ENST00000405675 GOLGA6L22H0YM25 854 aa34.49■■■■□ 3.11
CSNK1E-205ENST00000405675 PTMSP20962 102 aa34.49■■■■□ 3.11
CSNK1E-205ENST00000405675 SF3B2Q13435 895 aaKnown RBP34.49■■■■□ 3.11
CSNK1E-205ENST00000405675 RASGRF1Q13972 1273 aa34.49■■■■□ 3.11
CSNK1E-205ENST00000405675 ANKRD1Q15327 319 aa34.48■■■■□ 3.11
CSNK1E-205ENST00000405675 SLC9C2Q5TAH2 1124 aa34.48■■■■□ 3.11
CSNK1E-205ENST00000405675 DEFB132Q7Z7B7 95 aa34.48■■■■□ 3.11
CSNK1E-205ENST00000405675 NLGN1Q8N2Q7 840 aa34.48■■■■□ 3.11
CSNK1E-205ENST00000405675 SPATA5Q8NB90 893 aa34.48■■■■□ 3.11
CSNK1E-205ENST00000405675 BSDC1Q9NW68 430 aaPredicted RBP34.48■■■■□ 3.11
CSNK1E-205ENST00000405675 SMC3Q9UQE7 1217 aa34.48■■■■□ 3.11
CSNK1E-205ENST00000405675 IDH1O75874 414 aaKnown RBP34.48■■■■□ 3.11
CSNK1E-205ENST00000405675 BCAMP50895 628 aa34.48■■■■□ 3.11
CSNK1E-205ENST00000405675 MYO5AQ9Y4I1 1855 aaKnown RBP34.48■■■■□ 3.11
CSNK1E-205ENST00000405675 RPS8P62241 208 aaKnown RBP34.46■■■■□ 3.11
CSNK1E-205ENST00000405675 ST5P78524 1137 aa34.46■■■■□ 3.11
CSNK1E-205ENST00000405675 WWC3Q9ULE0 1092 aa34.46■■■■□ 3.11
CSNK1E-205ENST00000405675 SLC15A2Q16348 729 aa34.46■■■■□ 3.11
CSNK1E-205ENST00000405675 ZSCAN25Q6NSZ9 544 aa34.46■■■■□ 3.11
CSNK1E-205ENST00000405675 WTIPA6NIX2 430 aaPredicted RBP34.45■■■■□ 3.11
CSNK1E-205ENST00000405675 GPAA1O43292 621 aa34.45■■■■□ 3.11
CSNK1E-205ENST00000405675 BAG6P46379 1132 aa34.45■■■■□ 3.1
CSNK1E-205ENST00000405675 LMBRD1Q9NUN5 540 aa34.45■■■■□ 3.1
CSNK1E-205ENST00000405675 PDE6AP16499 860 aa34.44■■■■□ 3.1
CSNK1E-205ENST00000405675 SKOR2Q2VWA4 1001 aaPredicted RBP34.44■■■■□ 3.1
CSNK1E-205ENST00000405675 Q6ZUG5 572 aa34.44■■■■□ 3.1
CSNK1E-205ENST00000405675 E7EWF7 191 aa34.43■■■■□ 3.1
CSNK1E-205ENST00000405675 GJB2P29033 226 aa34.43■■■■□ 3.1
CSNK1E-205ENST00000405675 MINPP1Q9UNW1 487 aa34.43■■■■□ 3.1
CSNK1E-205ENST00000405675 UBE3CQ15386 1083 aa34.43■■■■□ 3.1
CSNK1E-205ENST00000405675 LRRC2Q9BYS8 371 aa34.43■■■■□ 3.1
CSNK1E-205ENST00000405675 STK32BQ9NY57 414 aa34.43■■■■□ 3.1
CSNK1E-205ENST00000405675 WDR33Q9C0J8 1336 aaKnown RBP34.43■■■■□ 3.1
CSNK1E-205ENST00000405675 ZNF532Q9HCE3 1301 aa34.43■■■■□ 3.1
CSNK1E-205ENST00000405675 LAMA4Q16363 1823 aa34.42■■■■□ 3.1
CSNK1E-205ENST00000405675 TCRBV5S4A2TA0A5A2 114 aa34.42■■■■□ 3.1
CSNK1E-205ENST00000405675 SYT1P21579 422 aa34.42■■■■□ 3.1
CSNK1E-205ENST00000405675 MSL1Q68DK7 614 aa34.42■■■■□ 3.1
CSNK1E-205ENST00000405675 FGAP02671 866 aa34.41■■■■□ 3.1
CSNK1E-205ENST00000405675 ILDR1Q86SU0 546 aaPredicted RBP34.41■■■■□ 3.1
CSNK1E-205ENST00000405675 A0A1B0GUL6 1792 aa34.41■■■■□ 3.1
CSNK1E-205ENST00000405675 DHX32Q7L7V1 743 aaKnown RBP34.4■■■■□ 3.1
CSNK1E-205ENST00000405675 CTNNA3Q9UI47 895 aa34.39■■■■□ 3.1
CSNK1E-205ENST00000405675 HMGB1P09429 215 aaKnown RBP34.39■■■■□ 3.1
CSNK1E-205ENST00000405675 HAND2P61296 217 aa34.39■■■■□ 3.1
CSNK1E-205ENST00000405675 EXOSC10Q01780 885 aaKnown RBP34.39■■■■□ 3.1
CSNK1E-205ENST00000405675 STK3Q13188 491 aa34.39■■■■□ 3.1
CSNK1E-205ENST00000405675 STX6O43752 255 aa34.38■■■■□ 3.09
CSNK1E-205ENST00000405675 PRPF40AO75400 957 aaKnown RBP34.38■■■■□ 3.09
CSNK1E-205ENST00000405675 MMP10P09238 476 aa34.38■■■■□ 3.09
CSNK1E-205ENST00000405675 CRY2Q49AN0 593 aa34.37■■■■□ 3.09
CSNK1E-205ENST00000405675 RPGRQ92834 1020 aaKnown RBP34.37■■■■□ 3.09
CSNK1E-205ENST00000405675 GYG1P46976 350 aa34.36■■■■□ 3.09
CSNK1E-205ENST00000405675 BRF1Q92994 677 aa34.36■■■■□ 3.09
CSNK1E-205ENST00000405675 DDX49Q9Y6V7 483 aaKnown RBP34.36■■■■□ 3.09
CSNK1E-205ENST00000405675 ZSCAN22P10073 491 aaPredicted RBP34.36■■■■□ 3.09
CSNK1E-205ENST00000405675 GRAPQ13588 217 aa34.36■■■■□ 3.09
CSNK1E-205ENST00000405675 UBE4AQ14139 1066 aa34.36■■■■□ 3.09
CSNK1E-205ENST00000405675 FOXD4L6Q3SYB3 417 aaPredicted RBP34.36■■■■□ 3.09
CSNK1E-205ENST00000405675 FOXD4L3Q6VB84 417 aaPredicted RBP34.36■■■■□ 3.09
CSNK1E-205ENST00000405675 GRAPLQ8TC17 118 aaPredicted RBP34.36■■■■□ 3.09
CSNK1E-205ENST00000405675 IQSEC3Q9UPP2 1182 aaPredicted RBP34.36■■■■□ 3.09
CSNK1E-205ENST00000405675 DOCK2Q92608 1830 aa34.35■■■■□ 3.09
CSNK1E-205ENST00000405675 KLHL40Q2TBA0 621 aa34.35■■■■□ 3.09
CSNK1E-205ENST00000405675 MAGEB6Q8N7X4 407 aa34.35■■■■□ 3.09
CSNK1E-205ENST00000405675 IMMTQ16891 758 aaKnown RBP34.34■■■■□ 3.09
CSNK1E-205ENST00000405675 ZNF804BA4D1E1 1349 aa34.34■■■■□ 3.09
CSNK1E-205ENST00000405675 MAP3K12Q12852 859 aa34.33■■■■□ 3.09
CSNK1E-205ENST00000405675 PARP3Q9Y6F1 533 aa34.33■■■■□ 3.09
CSNK1E-205ENST00000405675 CHST3Q7LGC8 479 aa34.33■■■■□ 3.09
CSNK1E-205ENST00000405675 SLC51AQ86UW1 340 aa34.33■■■■□ 3.09
CSNK1E-205ENST00000405675 GTF3C6Q969F1 213 aa34.33■■■■□ 3.09
CSNK1E-205ENST00000405675 MTMR6Q9Y217 621 aa34.32■■■■□ 3.08
CSNK1E-205ENST00000405675 STRBPQ96SI9 672 aaKnown RBP34.31■■■■□ 3.08
CSNK1E-205ENST00000405675 AGXT2Q9BYV1 514 aa34.31■■■■□ 3.08
CSNK1E-205ENST00000405675 FGD1P98174 961 aa34.31■■■■□ 3.08
CSNK1E-205ENST00000405675 KLRG2A4D1S0 409 aaPredicted RBP34.3■■■■□ 3.08
CSNK1E-205ENST00000405675 COL1A1P02452 1464 aaPredicted RBP34.3■■■■□ 3.08
CSNK1E-205ENST00000405675 RBM17Q96I25 401 aaKnown RBP34.3■■■■□ 3.08
CSNK1E-205ENST00000405675 NBPF3Q9H094 633 aa34.3■■■■□ 3.08
CSNK1E-205ENST00000405675 NRXN2Q9P2S2 1712 aa34.29■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms