RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 SLC9C2Q5TAH2 1124 aa15.14■□□□□ 0.01
SNED1-205ENST00000405547 LUC7L2Q9Y383 392 aaKnown RBP15.14■□□□□ 0.01
SNED1-205ENST00000405547 MYO5CQ9NQX4 1742 aa15.14■□□□□ 0.01
SNED1-205ENST00000405547 APOBRQ0VD83 1088 aa15.13■□□□□ 0.01
SNED1-205ENST00000405547 DHX58Q96C10 678 aa15.13■□□□□ 0.01
SNED1-205ENST00000405547 ZFP91Q96JP5 570 aaPredicted RBP15.13■□□□□ 0.01
SNED1-205ENST00000405547 A6NNZ2 444 aa15.13■□□□□ 0.01
SNED1-205ENST00000405547 TBCAO75347 108 aaKnown RBP15.13■□□□□ 0.01
SNED1-205ENST00000405547 KRT2P35908 639 aa15.13■□□□□ 0.01
SNED1-205ENST00000405547 GSTO1P78417 241 aa15.13■□□□□ 0.01
SNED1-205ENST00000405547 TUBB8Q3ZCM7 444 aa15.13■□□□□ 0.01
SNED1-205ENST00000405547 IKBKGQ9Y6K9 419 aa15.13■□□□□ 0.01
SNED1-205ENST00000405547 LMBR1LQ6UX01 489 aa15.13■□□□□ 0.01
SNED1-205ENST00000405547 ADAMTS12P58397 1594 aa15.13■□□□□ 0.01
SNED1-205ENST00000405547 EVCP57679 992 aa15.13■□□□□ 0.01
SNED1-205ENST00000405547 KLHL34Q8N239 644 aa15.13■□□□□ 0.01
SNED1-205ENST00000405547 DRC1Q96MC2 740 aa15.13■□□□□ 0.01
SNED1-205ENST00000405547 A0A1W2PRG0 241 aa15.13■□□□□ 0.01
SNED1-205ENST00000405547 GABPB1Q06547 395 aaPredicted RBP15.13■□□□□ 0.01
SNED1-205ENST00000405547 IQUBQ8NA54 791 aa15.13■□□□□ 0.01
SNED1-205ENST00000405547 RPGRQ92834 1020 aaKnown RBP15.13■□□□□ 0.01
SNED1-205ENST00000405547 VAT1LQ9HCJ6 419 aa15.13■□□□□ 0.01
SNED1-205ENST00000405547 KIF4AO95239 1232 aa15.12■□□□□ 0.01
SNED1-205ENST00000405547 PHACTR3Q96KR7 559 aa15.12■□□□□ 0.01
SNED1-205ENST00000405547 GUCA1BQ9UMX6 200 aa15.12■□□□□ 0.01
SNED1-205ENST00000405547 RIOK3O14730 519 aaKnown RBP15.12■□□□□ 0.01
SNED1-205ENST00000405547 RNF113AO15541 343 aaKnown RBP15.12■□□□□ 0.01
SNED1-205ENST00000405547 LMBRD1Q9NUN5 540 aa15.12■□□□□ 0.01
SNED1-205ENST00000405547 SLC4A4Q9Y6R1 1079 aa15.12■□□□□ 0.01
SNED1-205ENST00000405547 ASIC1P78348 528 aa15.12■□□□□ 0.01
SNED1-205ENST00000405547 CCDC129Q6ZRS4 1044 aa15.12■□□□□ 0.01
SNED1-205ENST00000405547 USP37Q86T82 979 aa15.12■□□□□ 0.01
SNED1-205ENST00000405547 PA2G4Q9UQ80 394 aaKnown RBP15.12■□□□□ 0.01
SNED1-205ENST00000405547 TSPY3P0CV98 308 aa15.12■□□□□ 0.01
SNED1-205ENST00000405547 TSPY8P0CW00 308 aa15.12■□□□□ 0.01
SNED1-205ENST00000405547 PPP2R3AQ06190 1150 aa15.12■□□□□ 0.01
SNED1-205ENST00000405547 FAM76AQ8TAV0 307 aa15.12■□□□□ 0.01
SNED1-205ENST00000405547 BABAM1Q9NWV8 329 aa15.11■□□□□ 0.01
SNED1-205ENST00000405547 MICALL1Q8N3F8 863 aa15.11■□□□□ 0.01
SNED1-205ENST00000405547 HELLSQ9NRZ9 838 aa15.11■□□□□ 0.01
SNED1-205ENST00000405547 A0A1B0GVL5 298 aa15.11■□□□□ 0.01
SNED1-205ENST00000405547 TRIM14Q14142 442 aa15.11■□□□□ 0.01
SNED1-205ENST00000405547 CCDC121Q6ZUS5 278 aa15.11■□□□□ 0.01
SNED1-205ENST00000405547 KRT28Q7Z3Y7 464 aa15.11■□□□□ 0.01
SNED1-205ENST00000405547 TRAF1Q13077 416 aa15.11■□□□□ 0.01
SNED1-205ENST00000405547 TTC14Q96N46 770 aa15.11■□□□□ 0.01
SNED1-205ENST00000405547 MMRN2Q9H8L6 949 aa15.11■□□□□ 0.01
SNED1-205ENST00000405547 UHRF1BP1LA0JNW5 1464 aa15.11■□□□□ 0.01
SNED1-205ENST00000405547 CYP7A1P22680 504 aa15.11■□□□□ 0.01
SNED1-205ENST00000405547 KARSQ15046 597 aaKnown RBP15.11■□□□□ 0.01
SNED1-205ENST00000405547 FMNL3Q8IVF7 1028 aa15.11■□□□□ 0.01
SNED1-205ENST00000405547 ADGRL2O95490 1459 aa15.11■□□□□ 0.01
SNED1-205ENST00000405547 MSL1Q68DK7 614 aa15.11■□□□□ 0.01
SNED1-205ENST00000405547 KIF24Q5T7B8 1368 aa15.11■□□□□ 0.01
SNED1-205ENST00000405547 HLA-DOAP06340 250 aa15.11■□□□□ 0.01
SNED1-205ENST00000405547 CCDC174Q6PII3 467 aa15.11■□□□□ 0.01
SNED1-205ENST00000405547 NEK11Q8NG66 645 aa15.11■□□□□ 0.01
SNED1-205ENST00000405547 PPP1R2P41236 205 aa15.1■□□□□ 0.01
SNED1-205ENST00000405547 PUF60Q9UHX1 559 aaKnown RBP15.1■□□□□ 0.01
SNED1-205ENST00000405547 ZNF75DP51815 510 aa15.1■□□□□ 0.01
SNED1-205ENST00000405547 MTHFSDQ2M296 383 aaKnown RBP15.1■□□□□ 0.01
SNED1-205ENST00000405547 B4GALNT4Q76KP1 1039 aa15.1■□□□□ 0.01
SNED1-205ENST00000405547 CCDC77Q9BR77 488 aa15.1■□□□□ 0.01
SNED1-205ENST00000405547 RASSF4Q9H2L5 321 aa15.1■□□□□ 0.01
SNED1-205ENST00000405547 ACTN2P35609 894 aa15.1■□□□□ 0.01
SNED1-205ENST00000405547 DTHD1Q6ZMT9 781 aa15.1■□□□□ 0.01
SNED1-205ENST00000405547 HOMER2Q9NSB8 354 aa15.1■□□□□ 0.01
SNED1-205ENST00000405547 AK9Q5TCS8 1911 aa15.1■□□□□ 0.01
SNED1-205ENST00000405547 JARID2Q92833 1246 aaPredicted RBP15.1■□□□□ 0.01
SNED1-205ENST00000405547 CLSTN2Q9H4D0 955 aa15.1■□□□□ 0.01
SNED1-205ENST00000405547 RHOXF2BP0C7M4 288 aa15.1■□□□□ 0.01
SNED1-205ENST00000405547 GTF3C6Q969F1 213 aa15.1■□□□□ 0.01
SNED1-205ENST00000405547 FERMT1Q9BQL6 677 aa15.1■□□□□ 0.01
SNED1-205ENST00000405547 RHOXF2Q9BQY4 288 aa15.1■□□□□ 0.01
SNED1-205ENST00000405547 CHST3Q7LGC8 479 aa15.09■□□□□ 0.01
SNED1-205ENST00000405547 SGSM2O43147 1006 aa15.09■□□□□ 0.01
SNED1-205ENST00000405547 HEATR3Q7Z4Q2 680 aa15.09■□□□□ 0.01
SNED1-205ENST00000405547 NUTM2BA6NNL0 878 aaPredicted RBP15.09■□□□□ 0.01
SNED1-205ENST00000405547 NUTM2EB1AL46 878 aaPredicted RBP15.09■□□□□ 0.01
SNED1-205ENST00000405547 RILPL1Q5EBL4 403 aa15.09■□□□□ 0.01
SNED1-205ENST00000405547 FBF1Q8TES7 1133 aa15.09■□□□□ 0.01
SNED1-205ENST00000405547 EXOC5O00471 708 aa15.09■□□□□ 0.01
SNED1-205ENST00000405547 BICC1Q9H694 974 aaKnown RBP15.09■□□□□ 0.01
SNED1-205ENST00000405547 CAPZA3Q96KX2 299 aa15.08■□□□□ 0.01
SNED1-205ENST00000405547 PPM1EQ8WY54 764 aa15.08■□□□□ 0
SNED1-205ENST00000405547 CBX8Q9HC52 389 aa15.08■□□□□ 0
SNED1-205ENST00000405547 ZEB2O60315 1214 aa15.08■□□□□ 0
SNED1-205ENST00000405547 FERMT2Q96AC1 680 aa15.08■□□□□ 0
SNED1-205ENST00000405547 CEP63Q96MT8 703 aa15.08■□□□□ 0
SNED1-205ENST00000405547 RBM28Q9NW13 759 aaKnown RBP15.08■□□□□ 0
SNED1-205ENST00000405547 KDM5CP41229 1560 aa15.08■□□□□ 0
SNED1-205ENST00000405547 SLC27A2O14975 620 aa15.08■□□□□ 0
SNED1-205ENST00000405547 TTF2Q9UNY4 1162 aaKnown RBP15.08■□□□□ 0
SNED1-205ENST00000405547 CCDC122Q5T0U0 273 aa15.08■□□□□ 0
SNED1-205ENST00000405547 CPLX4Q7Z7G2 160 aa15.08■□□□□ 0
SNED1-205ENST00000405547 CHMP4BP1P59074 171 aa15.07■□□□□ 0
SNED1-205ENST00000405547 NAA16Q6N069 864 aaPredicted RBP15.07■□□□□ 0
SNED1-205ENST00000405547 SSH2Q76I76 1423 aa15.07■□□□□ 0
SNED1-205ENST00000405547 ZNF500O60304 480 aaPredicted RBP15.07■□□□□ 0
SNED1-205ENST00000405547 TNNC1P63316 161 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms