RNA–Protein interactions for RNA: ENST00000404249.7

CDK11A-208, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK11A, Length 2,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-208ENST00000404249 ZNF330Q9Y3S2 320 aaPredicted RBP20.79■□□□□ 0.92
CDK11A-208ENST00000404249 RIOK3O14730 519 aaKnown RBP20.79■□□□□ 0.92
CDK11A-208ENST00000404249 APPBP2Q92624 585 aa20.79■□□□□ 0.92
CDK11A-208ENST00000404249 ABCC12Q96J65 1359 aa20.79■□□□□ 0.92
CDK11A-208ENST00000404249 PRC1O43663 620 aa20.78■□□□□ 0.92
CDK11A-208ENST00000404249 PCCAP05165 728 aaPredicted RBP20.78■□□□□ 0.92
CDK11A-208ENST00000404249 CCDC144BQ3MJ40 725 aa20.78■□□□□ 0.92
CDK11A-208ENST00000404249 TAF7LQ5H9L4 462 aa20.78■□□□□ 0.92
CDK11A-208ENST00000404249 BRINP3Q76B58 766 aa20.78■□□□□ 0.92
CDK11A-208ENST00000404249 CCDC144CPQ8IYA2 1237 aa20.78■□□□□ 0.92
CDK11A-208ENST00000404249 MB21D2Q8IYB1 491 aaPredicted RBP20.78■□□□□ 0.92
CDK11A-208ENST00000404249 CCDC85AQ96PX6 553 aaPredicted RBP20.78■□□□□ 0.92
CDK11A-208ENST00000404249 RTEL1Q9NZ71 1219 aa20.78■□□□□ 0.92
CDK11A-208ENST00000404249 RIC1Q4ADV7 1423 aa20.78■□□□□ 0.92
CDK11A-208ENST00000404249 C4AP0C0L4 1744 aa20.78■□□□□ 0.92
CDK11A-208ENST00000404249 C4BP0C0L5 1744 aa20.78■□□□□ 0.92
CDK11A-208ENST00000404249 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.78■□□□□ 0.92
CDK11A-208ENST00000404249 FGAP02671 866 aa20.78■□□□□ 0.92
CDK11A-208ENST00000404249 ZAP70P43403 619 aa20.78■□□□□ 0.92
CDK11A-208ENST00000404249 HSP90AB3PQ58FF7 597 aa20.78■□□□□ 0.92
CDK11A-208ENST00000404249 MRPS27Q92552 414 aaKnown RBP20.78■□□□□ 0.92
CDK11A-208ENST00000404249 TRIM28Q13263 835 aaKnown RBP20.77■□□□□ 0.92
CDK11A-208ENST00000404249 MRFAP1L1Q96HT8 127 aa20.77■□□□□ 0.92
CDK11A-208ENST00000404249 ARID3AQ99856 593 aa20.77■□□□□ 0.92
CDK11A-208ENST00000404249 CARD10Q9BWT7 1032 aa20.77■□□□□ 0.92
CDK11A-208ENST00000404249 PLA2G12BQ9BX93 195 aa20.77■□□□□ 0.92
CDK11A-208ENST00000404249 BCL2L12Q9HB09 334 aa20.77■□□□□ 0.92
CDK11A-208ENST00000404249 ANO10Q9NW15 660 aa20.77■□□□□ 0.92
CDK11A-208ENST00000404249 PCDHA7Q9UN72 937 aa20.77■□□□□ 0.92
CDK11A-208ENST00000404249 KLF18A0A0U1RQI7 1052 aa20.77■□□□□ 0.92
CDK11A-208ENST00000404249 FAM177BA6PVY3 158 aa20.77■□□□□ 0.92
CDK11A-208ENST00000404249 GOLGA8BA8MQT2 603 aa20.77■□□□□ 0.92
CDK11A-208ENST00000404249 CACTINQ8WUQ7 758 aaKnown RBP20.77■□□□□ 0.92
CDK11A-208ENST00000404249 FAM89AQ96GI7 184 aa20.77■□□□□ 0.92
CDK11A-208ENST00000404249 PUS7LQ9H0K6 701 aaKnown RBP20.77■□□□□ 0.92
CDK11A-208ENST00000404249 IFIT5Q13325 482 aaKnown RBP20.76■□□□□ 0.91
CDK11A-208ENST00000404249 OTUD7BQ6GQQ9 843 aa20.76■□□□□ 0.91
CDK11A-208ENST00000404249 KIF6Q6ZMV9 814 aa20.76■□□□□ 0.91
CDK11A-208ENST00000404249 C8orf76Q96K31 380 aa20.76■□□□□ 0.91
CDK11A-208ENST00000404249 AKAP11Q9UKA4 1901 aa20.76■□□□□ 0.91
CDK11A-208ENST00000404249 BECN2A8MW95 431 aa20.76■□□□□ 0.91
CDK11A-208ENST00000404249 ANTXR2P58335 489 aa20.76■□□□□ 0.91
CDK11A-208ENST00000404249 DHX40Q8IX18 779 aaKnown RBP20.76■□□□□ 0.91
CDK11A-208ENST00000404249 FMR1NBQ8N0W7 255 aaPredicted RBP20.76■□□□□ 0.91
CDK11A-208ENST00000404249 NCOA7Q8NI08 942 aa20.76■□□□□ 0.91
CDK11A-208ENST00000404249 HPS5Q9UPZ3 1129 aa20.76■□□□□ 0.91
CDK11A-208ENST00000404249 A0A087WWV3 80 aa20.75■□□□□ 0.91
CDK11A-208ENST00000404249 A0A1W2PQ27 194 aa20.75■□□□□ 0.91
CDK11A-208ENST00000404249 A0A1W2PQ64 194 aa20.75■□□□□ 0.91
CDK11A-208ENST00000404249 A0A1W2PQD8 194 aa20.75■□□□□ 0.91
CDK11A-208ENST00000404249 DHX16O60231 1041 aaKnown RBP20.75■□□□□ 0.91
CDK11A-208ENST00000404249 CSF1RP07333 972 aa20.75■□□□□ 0.91
CDK11A-208ENST00000404249 ADALQ6DHV7 355 aa20.75■□□□□ 0.91
CDK11A-208ENST00000404249 PI16Q6UXB8 463 aa20.75■□□□□ 0.91
CDK11A-208ENST00000404249 RALYLQ86SE5 291 aaKnown RBP20.75■□□□□ 0.91
CDK11A-208ENST00000404249 CEP57L1Q8IYX8 460 aa20.75■□□□□ 0.91
CDK11A-208ENST00000404249 ZBTB38Q8NAP3 1195 aaPredicted RBP20.75■□□□□ 0.91
CDK11A-208ENST00000404249 LINC00301Q8NCQ3 95 aa20.75■□□□□ 0.91
CDK11A-208ENST00000404249 C16orf45Q96MC5 204 aaPredicted RBP20.75■□□□□ 0.91
CDK11A-208ENST00000404249 TMOD3Q9NYL9 352 aa20.75■□□□□ 0.91
CDK11A-208ENST00000404249 GPAA1O43292 621 aa20.74■□□□□ 0.91
CDK11A-208ENST00000404249 ATP2B3Q16720 1220 aa20.74■□□□□ 0.91
CDK11A-208ENST00000404249 ORC3Q9UBD5 711 aaPredicted RBP20.74■□□□□ 0.91
CDK11A-208ENST00000404249 MYH3P11055 1940 aa20.74■□□□□ 0.91
CDK11A-208ENST00000404249 STK38Q15208 465 aa20.74■□□□□ 0.91
CDK11A-208ENST00000404249 CCDC94Q9BW85 323 aaPredicted RBP20.74■□□□□ 0.91
CDK11A-208ENST00000404249 CLIC4Q9Y696 253 aa20.74■□□□□ 0.91
CDK11A-208ENST00000404249 WDR19Q8NEZ3 1342 aa20.73■□□□□ 0.91
CDK11A-208ENST00000404249 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.73■□□□□ 0.91
CDK11A-208ENST00000404249 A0A1B0GVL5 298 aa20.73■□□□□ 0.91
CDK11A-208ENST00000404249 ZNF213O14771 459 aa20.73■□□□□ 0.91
CDK11A-208ENST00000404249 YEATS4O95619 227 aa20.73■□□□□ 0.91
CDK11A-208ENST00000404249 FBXO18Q8NFZ0 1043 aa20.73■□□□□ 0.91
CDK11A-208ENST00000404249 KCNG4Q8TDN1 519 aa20.73■□□□□ 0.91
CDK11A-208ENST00000404249 METTL24Q5JXM2 366 aa20.73■□□□□ 0.91
CDK11A-208ENST00000404249 BRAPQ7Z569 592 aa20.73■□□□□ 0.91
CDK11A-208ENST00000404249 RAB11FIP4Q86YS3 637 aa20.73■□□□□ 0.91
CDK11A-208ENST00000404249 DNAJC10Q8IXB1 793 aa20.73■□□□□ 0.91
CDK11A-208ENST00000404249 AOPEPQ8N6M6 819 aa20.73■□□□□ 0.91
CDK11A-208ENST00000404249 ERCC4Q92889 916 aaPredicted RBP20.73■□□□□ 0.91
CDK11A-208ENST00000404249 STRN4Q9NRL3 753 aa20.73■□□□□ 0.91
CDK11A-208ENST00000404249 POLR3EQ9NVU0 708 aa20.73■□□□□ 0.91
CDK11A-208ENST00000404249 ANKRD36CQ5JPF3 1778 aa20.72■□□□□ 0.91
CDK11A-208ENST00000404249 CPLX1O14810 134 aa20.72■□□□□ 0.91
CDK11A-208ENST00000404249 CTIFO43310 598 aaKnown RBP20.72■□□□□ 0.91
CDK11A-208ENST00000404249 SF3A1Q15459 793 aaKnown RBP20.72■□□□□ 0.91
CDK11A-208ENST00000404249 MYSM1Q5VVJ2 828 aa20.72■□□□□ 0.91
CDK11A-208ENST00000404249 LRRC8AQ8IWT6 810 aa20.72■□□□□ 0.91
CDK11A-208ENST00000404249 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.72■□□□□ 0.91
CDK11A-208ENST00000404249 MYO5AQ9Y4I1 1855 aaKnown RBP20.72■□□□□ 0.91
CDK11A-208ENST00000404249 POLR3DP05423 398 aaPredicted RBP20.72■□□□□ 0.91
CDK11A-208ENST00000404249 MCAMP43121 646 aa20.72■□□□□ 0.91
CDK11A-208ENST00000404249 NDUFA8P51970 172 aa20.72■□□□□ 0.91
CDK11A-208ENST00000404249 SDF4Q9BRK5 362 aa20.72■□□□□ 0.91
CDK11A-208ENST00000404249 NAT10Q9H0A0 1025 aaKnown RBP20.72■□□□□ 0.91
CDK11A-208ENST00000404249 ATRNO75882 1429 aa20.71■□□□□ 0.91
CDK11A-208ENST00000404249 CDHR2Q9BYE9 1310 aa20.71■□□□□ 0.91
CDK11A-208ENST00000404249 NEMFO60524 1076 aa20.71■□□□□ 0.91
CDK11A-208ENST00000404249 TEX13AQ9BXU3 409 aaPredicted RBP20.71■□□□□ 0.91
CDK11A-208ENST00000404249 RIPOR2Q9Y4F9 1068 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms