RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 ZNF804BA4D1E1 1349 aa15.38■□□□□ 0.05
SPTLC1P3-201ENST00000403408 ECM29Q5VYK3 1845 aa15.38■□□□□ 0.05
SPTLC1P3-201ENST00000403408 H7C1W4 665 aa15.37■□□□□ 0.05
SPTLC1P3-201ENST00000403408 USP2O75604 605 aaPredicted RBP15.37■□□□□ 0.05
SPTLC1P3-201ENST00000403408 CASP7P55210 303 aa15.37■□□□□ 0.05
SPTLC1P3-201ENST00000403408 G2E3Q7L622 706 aa15.37■□□□□ 0.05
SPTLC1P3-201ENST00000403408 CDAN1Q8IWY9 1227 aa15.37■□□□□ 0.05
SPTLC1P3-201ENST00000403408 IFT57Q9NWB7 429 aa15.37■□□□□ 0.05
SPTLC1P3-201ENST00000403408 A0A1B0GUL6 1792 aa15.36■□□□□ 0.05
SPTLC1P3-201ENST00000403408 ZSWIM8A7E2V4 1837 aa15.36■□□□□ 0.05
SPTLC1P3-201ENST00000403408 COL1A1P02452 1464 aaPredicted RBP15.36■□□□□ 0.05
SPTLC1P3-201ENST00000403408 CLRN2A0PK11 232 aa15.36■□□□□ 0.05
SPTLC1P3-201ENST00000403408 NEURL1BA8MQ27 555 aa15.36■□□□□ 0.05
SPTLC1P3-201ENST00000403408 ZBTB48P10074 688 aaPredicted RBP15.36■□□□□ 0.05
SPTLC1P3-201ENST00000403408 INHBEP58166 350 aa15.36■□□□□ 0.05
SPTLC1P3-201ENST00000403408 INTS3Q68E01 1043 aaKnown RBP15.36■□□□□ 0.05
SPTLC1P3-201ENST00000403408 KSR2Q6VAB6 950 aa15.36■□□□□ 0.05
SPTLC1P3-201ENST00000403408 MTMR14Q8NCE2 650 aa15.36■□□□□ 0.05
SPTLC1P3-201ENST00000403408 PRMT6Q96LA8 375 aaPredicted RBP15.36■□□□□ 0.05
SPTLC1P3-201ENST00000403408 CD209Q9NNX6 404 aa15.36■□□□□ 0.05
SPTLC1P3-201ENST00000403408 COLQQ9Y215 455 aaPredicted RBP15.36■□□□□ 0.05
SPTLC1P3-201ENST00000403408 MYBBP1AQ9BQG0 1328 aaKnown RBP15.36■□□□□ 0.05
SPTLC1P3-201ENST00000403408 TESPA1A2RU30 521 aaPredicted RBP15.35■□□□□ 0.05
SPTLC1P3-201ENST00000403408 ZNF333Q96JL9 665 aa15.35■□□□□ 0.05
SPTLC1P3-201ENST00000403408 APAF1O14727 1248 aa15.34■□□□□ 0.05
SPTLC1P3-201ENST00000403408 ITGA6P23229 1130 aa15.34■□□□□ 0.05
SPTLC1P3-201ENST00000403408 MMP14P50281 582 aa15.34■□□□□ 0.05
SPTLC1P3-201ENST00000403408 CHRNDQ07001 517 aa15.34■□□□□ 0.05
SPTLC1P3-201ENST00000403408 DLGAP5Q15398 846 aa15.34■□□□□ 0.05
SPTLC1P3-201ENST00000403408 UBE3BQ7Z3V4 1068 aa15.34■□□□□ 0.05
SPTLC1P3-201ENST00000403408 MS4A4AQ96JQ5 239 aa15.34■□□□□ 0.05
SPTLC1P3-201ENST00000403408 EFCC1Q9HA90 598 aa15.34■□□□□ 0.05
SPTLC1P3-201ENST00000403408 JAG2Q9Y219 1238 aa15.34■□□□□ 0.05
SPTLC1P3-201ENST00000403408 SPDYE2BA6NHP3 402 aa15.33■□□□□ 0.04
SPTLC1P3-201ENST00000403408 F8W031 263 aaPredicted RBP15.33■□□□□ 0.04
SPTLC1P3-201ENST00000403408 TAF5LO75529 589 aa15.33■□□□□ 0.04
SPTLC1P3-201ENST00000403408 CSF1RP07333 972 aa15.33■□□□□ 0.04
SPTLC1P3-201ENST00000403408 SPDYE6P0CI01 402 aa15.33■□□□□ 0.04
SPTLC1P3-201ENST00000403408 CFAP100Q494V2 611 aa15.33■□□□□ 0.04
SPTLC1P3-201ENST00000403408 HELBQ8NG08 1087 aaPredicted RBP15.33■□□□□ 0.04
SPTLC1P3-201ENST00000403408 ERO1AQ96HE7 468 aa15.33■□□□□ 0.04
SPTLC1P3-201ENST00000403408 PLA2G12BQ9BX93 195 aa15.33■□□□□ 0.04
SPTLC1P3-201ENST00000403408 IGHMBP2P38935 993 aaKnown RBP15.32■□□□□ 0.04
SPTLC1P3-201ENST00000403408 GNAI1P63096 354 aa15.32■□□□□ 0.04
SPTLC1P3-201ENST00000403408 SP3Q02447 781 aa15.32■□□□□ 0.04
SPTLC1P3-201ENST00000403408 WDR43Q15061 677 aaKnown RBP eCLIP15.32■□□□□ 0.04
SPTLC1P3-201ENST00000403408 BRI3BPQ8WY22 251 aa15.32■□□□□ 0.04
SPTLC1P3-201ENST00000403408 OTUD5Q96G74 571 aa15.32■□□□□ 0.04
SPTLC1P3-201ENST00000403408 PTCH2Q9Y6C5 1203 aa15.32■□□□□ 0.04
SPTLC1P3-201ENST00000403408 PPP1R12BO60237 982 aaPredicted RBP15.31■□□□□ 0.04
SPTLC1P3-201ENST00000403408 DDX58O95786 925 aaKnown RBP15.31■□□□□ 0.04
SPTLC1P3-201ENST00000403408 RASA3Q14644 834 aa15.31■□□□□ 0.04
SPTLC1P3-201ENST00000403408 CCDC30Q5VVM6 783 aa15.31■□□□□ 0.04
SPTLC1P3-201ENST00000403408 TEPSINQ96N21 525 aa15.31■□□□□ 0.04
SPTLC1P3-201ENST00000403408 ANKRD2Q9GZV1 360 aa15.31■□□□□ 0.04
SPTLC1P3-201ENST00000403408 ELP3Q9H9T3 547 aa15.31■□□□□ 0.04
SPTLC1P3-201ENST00000403408 PPP2R3BQ9Y5P8 575 aa15.31■□□□□ 0.04
SPTLC1P3-201ENST00000403408 IL1R1P14778 569 aa15.3■□□□□ 0.04
SPTLC1P3-201ENST00000403408 GCKRQ14397 625 aa15.3■□□□□ 0.04
SPTLC1P3-201ENST00000403408 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.3■□□□□ 0.04
SPTLC1P3-201ENST00000403408 C15orf52Q6ZUT6 534 aaKnown RBP15.3■□□□□ 0.04
SPTLC1P3-201ENST00000403408 TSR2Q969E8 191 aaKnown RBP15.3■□□□□ 0.04
SPTLC1P3-201ENST00000403408 ARHGAP39Q9C0H5 1083 aa15.3■□□□□ 0.04
SPTLC1P3-201ENST00000403408 VEZTQ9HBM0 779 aa15.3■□□□□ 0.04
SPTLC1P3-201ENST00000403408 UNCXA6NJT0 531 aa15.29■□□□□ 0.04
SPTLC1P3-201ENST00000403408 H0YGN5 161 aa15.29■□□□□ 0.04
SPTLC1P3-201ENST00000403408 MYCP01106 439 aaPredicted RBP15.29■□□□□ 0.04
SPTLC1P3-201ENST00000403408 FAM43AQ8N2R8 423 aa15.29■□□□□ 0.04
SPTLC1P3-201ENST00000403408 OPTNQ96CV9 577 aa15.29■□□□□ 0.04
SPTLC1P3-201ENST00000403408 IREB2P48200 963 aaKnown RBP15.28■□□□□ 0.04
SPTLC1P3-201ENST00000403408 FOXO4P98177 505 aa15.28■□□□□ 0.04
SPTLC1P3-201ENST00000403408 DDX10Q13206 875 aaKnown RBP15.28■□□□□ 0.04
SPTLC1P3-201ENST00000403408 GRIK5Q16478 980 aa15.28■□□□□ 0.04
SPTLC1P3-201ENST00000403408 SUPT20HL1Q3ZLR7 823 aa15.28■□□□□ 0.04
SPTLC1P3-201ENST00000403408 ANKRD13AQ8IZ07 590 aa15.28■□□□□ 0.04
SPTLC1P3-201ENST00000403408 MPHOSPH8Q99549 860 aa15.28■□□□□ 0.04
SPTLC1P3-201ENST00000403408 EPHA10Q5JZY3 1008 aa15.27■□□□□ 0.04
SPTLC1P3-201ENST00000403408 SH3TC2Q8TF17 1288 aa15.27■□□□□ 0.04
SPTLC1P3-201ENST00000403408 ZNF70Q9UC06 446 aaPredicted RBP15.27■□□□□ 0.04
SPTLC1P3-201ENST00000403408 CTGFP29279 349 aa15.26■□□□□ 0.03
SPTLC1P3-201ENST00000403408 KCNJ4P48050 445 aa15.26■□□□□ 0.03
SPTLC1P3-201ENST00000403408 FKBP1AP62942 108 aaKnown RBP15.26■□□□□ 0.03
SPTLC1P3-201ENST00000403408 NEXNQ0ZGT2 675 aa15.26■□□□□ 0.03
SPTLC1P3-201ENST00000403408 VGLL4Q14135 290 aa15.26■□□□□ 0.03
SPTLC1P3-201ENST00000403408 SPDYE2Q495Y8 402 aa15.26■□□□□ 0.03
SPTLC1P3-201ENST00000403408 SHISA4Q96DD7 197 aa15.26■□□□□ 0.03
SPTLC1P3-201ENST00000403408 ZNF594Q96JF6 807 aaPredicted RBP15.26■□□□□ 0.03
SPTLC1P3-201ENST00000403408 TMEM39BQ9GZU3 492 aa15.26■□□□□ 0.03
SPTLC1P3-201ENST00000403408 TDRD3Q9H7E2 651 aaKnown RBP15.26■□□□□ 0.03
SPTLC1P3-201ENST00000403408 CCL15-CCL14A0A0B4J2E2 113 aa15.25■□□□□ 0.03
SPTLC1P3-201ENST00000403408 SLC4A2P04920 1241 aa15.25■□□□□ 0.03
SPTLC1P3-201ENST00000403408 CCL15Q16663 113 aa15.25■□□□□ 0.03
SPTLC1P3-201ENST00000403408 SLC9C1Q4G0N8 1177 aa15.25■□□□□ 0.03
SPTLC1P3-201ENST00000403408 OTUD7BQ6GQQ9 843 aa15.25■□□□□ 0.03
SPTLC1P3-201ENST00000403408 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.25■□□□□ 0.03
SPTLC1P3-201ENST00000403408 TMEM106CQ9BVX2 250 aa15.25■□□□□ 0.03
SPTLC1P3-201ENST00000403408 ARAP2Q8WZ64 1704 aa15.25■□□□□ 0.03
SPTLC1P3-201ENST00000403408 FAM205AQ6ZU69 1335 aa15.24■□□□□ 0.03
SPTLC1P3-201ENST00000403408 TAF1CQ15572 869 aaPredicted RBP15.24■□□□□ 0.03
SPTLC1P3-201ENST00000403408 ANKRD18BA2A2Z9 1011 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms