RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 PHKBQ93100 1093 aa19.89■□□□□ 0.78
SNRNP70-202ENST00000401730 SLIT3O75094 1523 aa19.89■□□□□ 0.78
SNRNP70-202ENST00000401730 ZSCAN20P17040 1043 aaPredicted RBP19.89■□□□□ 0.77
SNRNP70-202ENST00000401730 ZRSR1Q15695 479 aaKnown RBP19.89■□□□□ 0.77
SNRNP70-202ENST00000401730 IMMTQ16891 758 aaKnown RBP19.89■□□□□ 0.77
SNRNP70-202ENST00000401730 CNNM1Q9NRU3 951 aa19.89■□□□□ 0.77
SNRNP70-202ENST00000401730 U2AF2P26368 475 aaKnown RBP eCLIP19.89■□□□□ 0.77
SNRNP70-202ENST00000401730 IFIT5Q13325 482 aaKnown RBP19.89■□□□□ 0.77
SNRNP70-202ENST00000401730 CCDC191Q8NCU4 936 aa19.89■□□□□ 0.77
SNRNP70-202ENST00000401730 TDRD7Q8NHU6 1098 aaKnown RBP19.89■□□□□ 0.77
SNRNP70-202ENST00000401730 TOMM22Q9NS69 142 aa19.89■□□□□ 0.77
SNRNP70-202ENST00000401730 RCOR1Q9UKL0 485 aa19.89■□□□□ 0.77
SNRNP70-202ENST00000401730 CARMIL3Q8ND23 1372 aa19.88■□□□□ 0.77
SNRNP70-202ENST00000401730 FOXP2O15409 715 aa19.88■□□□□ 0.77
SNRNP70-202ENST00000401730 GPAA1O43292 621 aa19.88■□□□□ 0.77
SNRNP70-202ENST00000401730 MICU3Q86XE3 530 aa19.88■□□□□ 0.77
SNRNP70-202ENST00000401730 PLA2G4DQ86XP0 818 aa19.88■□□□□ 0.77
SNRNP70-202ENST00000401730 IQCB1Q15051 598 aa19.88■□□□□ 0.77
SNRNP70-202ENST00000401730 PDCL2Q8N4E4 241 aa19.88■□□□□ 0.77
SNRNP70-202ENST00000401730 ZNF396Q96N95 335 aaPredicted RBP19.88■□□□□ 0.77
SNRNP70-202ENST00000401730 TBC1D2BQ9UPU7 963 aa19.88■□□□□ 0.77
SNRNP70-202ENST00000401730 KIF28PB7ZC32 967 aa19.87■□□□□ 0.77
SNRNP70-202ENST00000401730 SMC2O95347 1197 aa19.87■□□□□ 0.77
SNRNP70-202ENST00000401730 DMTNQ08495 405 aa19.87■□□□□ 0.77
SNRNP70-202ENST00000401730 SLC9C2Q5TAH2 1124 aa19.87■□□□□ 0.77
SNRNP70-202ENST00000401730 GREM2Q9H772 168 aa19.87■□□□□ 0.77
SNRNP70-202ENST00000401730 JCADQ9P266 1359 aa19.87■□□□□ 0.77
SNRNP70-202ENST00000401730 OVOS2A0A0G2JMS6 1433 aa19.87■□□□□ 0.77
SNRNP70-202ENST00000401730 ZNF213O14771 459 aa19.87■□□□□ 0.77
SNRNP70-202ENST00000401730 ATP2B1P20020 1258 aa19.87■□□□□ 0.77
SNRNP70-202ENST00000401730 GNL2Q13823 731 aaKnown RBP19.87■□□□□ 0.77
SNRNP70-202ENST00000401730 STX1AQ16623 288 aa19.87■□□□□ 0.77
SNRNP70-202ENST00000401730 DPCR1Q3MIW9 517 aa19.87■□□□□ 0.77
SNRNP70-202ENST00000401730 PALLDQ8WX93 1383 aa19.86■□□□□ 0.77
SNRNP70-202ENST00000401730 SPECC1Q5M775 1068 aa19.86■□□□□ 0.77
SNRNP70-202ENST00000401730 NAA16Q6N069 864 aaPredicted RBP19.86■□□□□ 0.77
SNRNP70-202ENST00000401730 TMOD3Q9NYL9 352 aa19.86■□□□□ 0.77
SNRNP70-202ENST00000401730 RRP12Q5JTH9 1297 aaKnown RBP19.86■□□□□ 0.77
SNRNP70-202ENST00000401730 SKILP12757 684 aa19.85■□□□□ 0.77
SNRNP70-202ENST00000401730 FAM160A1Q05DH4 1040 aa19.85■□□□□ 0.77
SNRNP70-202ENST00000401730 SYNE3Q6ZMZ3 975 aa19.85■□□□□ 0.77
SNRNP70-202ENST00000401730 IQSEC3Q9UPP2 1182 aaPredicted RBP19.85■□□□□ 0.77
SNRNP70-202ENST00000401730 B4E1Z4 1266 aa19.85■□□□□ 0.77
SNRNP70-202ENST00000401730 MCAMP43121 646 aa19.85■□□□□ 0.77
SNRNP70-202ENST00000401730 ANTXR2P58335 489 aa19.85■□□□□ 0.77
SNRNP70-202ENST00000401730 CMTR1Q8N1G2 835 aaKnown RBP19.85■□□□□ 0.77
SNRNP70-202ENST00000401730 LLPHQ9BRT6 129 aaKnown RBP19.85■□□□□ 0.77
SNRNP70-202ENST00000401730 ITGA6P23229 1130 aa19.85■□□□□ 0.77
SNRNP70-202ENST00000401730 TCIRG1Q13488 830 aa19.85■□□□□ 0.77
SNRNP70-202ENST00000401730 ZKSCAN3Q9BRR0 538 aa19.85■□□□□ 0.77
SNRNP70-202ENST00000401730 SPATA31A3Q5VYP0 1347 aa19.84■□□□□ 0.77
SNRNP70-202ENST00000401730 CCDC69A6NI79 296 aa19.84■□□□□ 0.77
SNRNP70-202ENST00000401730 IL2RBP14784 551 aa19.84■□□□□ 0.77
SNRNP70-202ENST00000401730 NFXL1Q6ZNB6 911 aa19.84■□□□□ 0.77
SNRNP70-202ENST00000401730 RBM43Q6ZSC3 357 aaKnown RBP19.84■□□□□ 0.77
SNRNP70-202ENST00000401730 MRPS27Q92552 414 aaKnown RBP19.84■□□□□ 0.77
SNRNP70-202ENST00000401730 PCDH11XQ9BZA7 1347 aa19.84■□□□□ 0.77
SNRNP70-202ENST00000401730 PCDH11YQ9BZA8 1340 aa19.84■□□□□ 0.77
SNRNP70-202ENST00000401730 TPM3P06753 285 aa19.84■□□□□ 0.77
SNRNP70-202ENST00000401730 CADPS2Q86UW7 1296 aa19.84■□□□□ 0.77
SNRNP70-202ENST00000401730 DHX40Q8IX18 779 aaKnown RBP19.84■□□□□ 0.77
SNRNP70-202ENST00000401730 LMOD1P29536 600 aaPredicted RBP19.83■□□□□ 0.77
SNRNP70-202ENST00000401730 KIF6Q6ZMV9 814 aa19.83■□□□□ 0.77
SNRNP70-202ENST00000401730 HPS5Q9UPZ3 1129 aa19.83■□□□□ 0.76
SNRNP70-202ENST00000401730 AFDNP55196 1824 aaKnown RBP19.83■□□□□ 0.76
SNRNP70-202ENST00000401730 USP54Q70EL1 1684 aa19.83■□□□□ 0.76
SNRNP70-202ENST00000401730 PDIA4P13667 645 aaKnown RBP19.82■□□□□ 0.76
SNRNP70-202ENST00000401730 GOLGA8FQ08AF8 430 aa19.82■□□□□ 0.76
SNRNP70-202ENST00000401730 GOLGA8DPQ0D2H9 430 aa19.82■□□□□ 0.76
SNRNP70-202ENST00000401730 LRRC8AQ8IWT6 810 aa19.82■□□□□ 0.76
SNRNP70-202ENST00000401730 CEP57L1Q8IYX8 460 aa19.82■□□□□ 0.76
SNRNP70-202ENST00000401730 ENGASEQ8NFI3 743 aa19.82■□□□□ 0.76
SNRNP70-202ENST00000401730 CLIC6Q96NY7 704 aa19.82■□□□□ 0.76
SNRNP70-202ENST00000401730 PHKA1P46020 1223 aa19.82■□□□□ 0.76
SNRNP70-202ENST00000401730 NCOA7Q8NI08 942 aa19.82■□□□□ 0.76
SNRNP70-202ENST00000401730 ZNF274Q96GC6 653 aaPredicted RBP19.82■□□□□ 0.76
SNRNP70-202ENST00000401730 ANO10Q9NW15 660 aa19.82■□□□□ 0.76
SNRNP70-202ENST00000401730 TRMT112Q9UI30 125 aaKnown RBP19.82■□□□□ 0.76
SNRNP70-202ENST00000401730 SPTLC2O15270 562 aa19.82■□□□□ 0.76
SNRNP70-202ENST00000401730 TRDNQ13061 729 aa19.82■□□□□ 0.76
SNRNP70-202ENST00000401730 CYB5R4Q7L1T6 521 aa19.82■□□□□ 0.76
SNRNP70-202ENST00000401730 TBC1D10CQ8IV04 446 aa19.82■□□□□ 0.76
SNRNP70-202ENST00000401730 CHMP4CQ96CF2 233 aa19.82■□□□□ 0.76
SNRNP70-202ENST00000401730 PIH1D3Q9NQM4 214 aaKnown RBP19.82■□□□□ 0.76
SNRNP70-202ENST00000401730 BRINP3Q76B58 766 aa19.81■□□□□ 0.76
SNRNP70-202ENST00000401730 LINC00301Q8NCQ3 95 aa19.81■□□□□ 0.76
SNRNP70-202ENST00000401730 PIGBQ92521 554 aa19.81■□□□□ 0.76
SNRNP70-202ENST00000401730 IFNKQ9P0W0 207 aa19.81■□□□□ 0.76
SNRNP70-202ENST00000401730 CTDSPL2Q05D32 466 aa19.81■□□□□ 0.76
SNRNP70-202ENST00000401730 CTNNA3Q9UI47 895 aa19.81■□□□□ 0.76
SNRNP70-202ENST00000401730 WWC3Q9ULE0 1092 aa19.81■□□□□ 0.76
SNRNP70-202ENST00000401730 MST1RQ04912 1400 aa19.81■□□□□ 0.76
SNRNP70-202ENST00000401730 MYSM1Q5VVJ2 828 aa19.8■□□□□ 0.76
SNRNP70-202ENST00000401730 ZNF771Q7L3S4 317 aaPredicted RBP19.8■□□□□ 0.76
SNRNP70-202ENST00000401730 TMC6Q7Z403 805 aa19.8■□□□□ 0.76
SNRNP70-202ENST00000401730 APPBP2Q92624 585 aa19.8■□□□□ 0.76
SNRNP70-202ENST00000401730 FMR1NBQ8N0W7 255 aaPredicted RBP19.8■□□□□ 0.76
SNRNP70-202ENST00000401730 FBXO18Q8NFZ0 1043 aa19.8■□□□□ 0.76
SNRNP70-202ENST00000401730 WDR17Q8IZU2 1322 aa19.8■□□□□ 0.76
SNRNP70-202ENST00000401730 ALG1Q9BT22 464 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms