RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 NBR1Q14596 966 aa30.66■■■□□ 2.5
CPNE1-205ENST00000401607 RBM17Q96I25 401 aaKnown RBP30.66■■■□□ 2.5
CPNE1-205ENST00000401607 GNL3LQ9NVN8 582 aaKnown RBP30.66■■■□□ 2.5
CPNE1-205ENST00000401607 ZNF532Q9HCE3 1301 aa30.65■■■□□ 2.5
CPNE1-205ENST00000401607 IRS2Q9Y4H2 1338 aa30.65■■■□□ 2.5
CPNE1-205ENST00000401607 CYP21A2P08686 494 aa30.65■■■□□ 2.5
CPNE1-205ENST00000401607 RUFY3Q7L099 469 aa30.65■■■□□ 2.5
CPNE1-205ENST00000401607 AK2P54819 239 aa30.64■■■□□ 2.5
CPNE1-205ENST00000401607 COL9A3Q14050 684 aaPredicted RBP30.64■■■□□ 2.5
CPNE1-205ENST00000401607 NOL8Q76FK4 1167 aaKnown RBP30.64■■■□□ 2.5
CPNE1-205ENST00000401607 CYP46A1Q9Y6A2 500 aa30.64■■■□□ 2.5
CPNE1-205ENST00000401607 GPAA1O43292 621 aa30.64■■■□□ 2.49
CPNE1-205ENST00000401607 PSMA5P28066 241 aa30.64■■■□□ 2.49
CPNE1-205ENST00000401607 CIZ1Q9ULV3 898 aaPredicted RBP30.64■■■□□ 2.49
CPNE1-205ENST00000401607 MMP10P09238 476 aa30.63■■■□□ 2.49
CPNE1-205ENST00000401607 MAP3K12Q12852 859 aa30.63■■■□□ 2.49
CPNE1-205ENST00000401607 SLC15A2Q16348 729 aa30.63■■■□□ 2.49
CPNE1-205ENST00000401607 CUL4AQ13619 759 aa30.62■■■□□ 2.49
CPNE1-205ENST00000401607 VPS37DQ86XT2 251 aa30.62■■■□□ 2.49
CPNE1-205ENST00000401607 NFKBIBQ15653 356 aa30.61■■■□□ 2.49
CPNE1-205ENST00000401607 CRAMP1Q96RY5 1269 aa30.61■■■□□ 2.49
CPNE1-205ENST00000401607 BRIP1Q9BX63 1249 aa30.61■■■□□ 2.49
CPNE1-205ENST00000401607 PDRG1Q9NUG6 133 aa30.61■■■□□ 2.49
CPNE1-205ENST00000401607 QSER1Q2KHR3 1735 aa30.61■■■□□ 2.49
CPNE1-205ENST00000401607 KRT32Q14532 448 aa30.61■■■□□ 2.49
CPNE1-205ENST00000401607 MSL1Q68DK7 614 aa30.61■■■□□ 2.49
CPNE1-205ENST00000401607 MAGEB6Q8N7X4 407 aa30.61■■■□□ 2.49
CPNE1-205ENST00000401607 XDHP47989 1333 aa30.61■■■□□ 2.49
CPNE1-205ENST00000401607 TXNRD3Q86VQ6 643 aa30.6■■■□□ 2.49
CPNE1-205ENST00000401607 ANKIB1Q9P2G1 1089 aa30.6■■■□□ 2.49
CPNE1-205ENST00000401607 DENND2AQ9ULE3 1009 aa30.6■■■□□ 2.49
CPNE1-205ENST00000401607 LEMD3Q9Y2U8 911 aa30.6■■■□□ 2.49
CPNE1-205ENST00000401607 A0A0G2JLW4 131 aa30.59■■■□□ 2.49
CPNE1-205ENST00000401607 SEMA3EO15041 775 aa30.59■■■□□ 2.49
CPNE1-205ENST00000401607 HIBADHP31937 336 aaKnown RBP30.59■■■□□ 2.49
CPNE1-205ENST00000401607 ZGPATQ8N5A5 531 aaKnown RBP30.59■■■□□ 2.49
CPNE1-205ENST00000401607 PARP3Q9Y6F1 533 aa30.59■■■□□ 2.49
CPNE1-205ENST00000401607 BLOC1S2Q6QNY1 142 aa30.59■■■□□ 2.49
CPNE1-205ENST00000401607 STK32BQ9NY57 414 aa30.59■■■□□ 2.49
CPNE1-205ENST00000401607 BBOX1O75936 387 aa30.58■■■□□ 2.49
CPNE1-205ENST00000401607 RPS6KB1P23443 525 aa30.58■■■□□ 2.49
CPNE1-205ENST00000401607 STOX1Q6ZVD7 989 aa30.58■■■□□ 2.49
CPNE1-205ENST00000401607 LRRC37AA6NMS7 1700 aa30.58■■■□□ 2.49
CPNE1-205ENST00000401607 GPSM2P81274 684 aa30.57■■■□□ 2.48
CPNE1-205ENST00000401607 TTLL5Q6EMB2 1281 aa30.57■■■□□ 2.48
CPNE1-205ENST00000401607 MYH13Q9UKX3 1938 aa30.57■■■□□ 2.48
CPNE1-205ENST00000401607 PDS5AQ29RF7 1337 aaKnown RBP30.57■■■□□ 2.48
CPNE1-205ENST00000401607 ZBTB22O15209 634 aa30.56■■■□□ 2.48
CPNE1-205ENST00000401607 NEK1Q96PY6 1258 aa30.56■■■□□ 2.48
CPNE1-205ENST00000401607 LRP2BPQ9P2M1 347 aa30.56■■■□□ 2.48
CPNE1-205ENST00000401607 LIMCH1Q9UPQ0 1083 aa30.56■■■□□ 2.48
CPNE1-205ENST00000401607 COL11A2P13942 1736 aaPredicted RBP30.55■■■□□ 2.48
CPNE1-205ENST00000401607 FGAP02671 866 aa30.55■■■□□ 2.48
CPNE1-205ENST00000401607 LARP6Q9BRS8 491 aaKnown RBP30.55■■■□□ 2.48
CPNE1-205ENST00000401607 STRBPQ96SI9 672 aaKnown RBP30.54■■■□□ 2.48
CPNE1-205ENST00000401607 ALDH8A1Q9H2A2 487 aaPredicted RBP30.54■■■□□ 2.48
CPNE1-205ENST00000401607 CWC22Q9HCG8 908 aaKnown RBP30.54■■■□□ 2.48
CPNE1-205ENST00000401607 ABCF2Q9UG63 623 aa30.54■■■□□ 2.48
CPNE1-205ENST00000401607 CTNNA3Q9UI47 895 aa30.54■■■□□ 2.48
CPNE1-205ENST00000401607 LAMA4Q16363 1823 aa30.54■■■□□ 2.48
CPNE1-205ENST00000401607 SRGNP10124 158 aa30.54■■■□□ 2.48
CPNE1-205ENST00000401607 C15orf52Q6ZUT6 534 aaKnown RBP30.54■■■□□ 2.48
CPNE1-205ENST00000401607 INTS4Q96HW7 963 aaKnown RBP30.54■■■□□ 2.48
CPNE1-205ENST00000401607 BAG6P46379 1132 aa30.53■■■□□ 2.48
CPNE1-205ENST00000401607 CACNA1SQ13698 1873 aa30.53■■■□□ 2.48
CPNE1-205ENST00000401607 DEFB132Q7Z7B7 95 aa30.53■■■□□ 2.48
CPNE1-205ENST00000401607 AIDAQ96BJ3 306 aa30.53■■■□□ 2.48
CPNE1-205ENST00000401607 LTBP1Q14766 1721 aa30.52■■■□□ 2.48
CPNE1-205ENST00000401607 FRAT2O75474 233 aaPredicted RBP30.52■■■□□ 2.48
CPNE1-205ENST00000401607 SF3B2Q13435 895 aaKnown RBP30.52■■■□□ 2.48
CPNE1-205ENST00000401607 RAB3GAP1Q15042 981 aa30.52■■■□□ 2.48
CPNE1-205ENST00000401607 TCEANC2Q96MN5 208 aa30.52■■■□□ 2.48
CPNE1-205ENST00000401607 NSFL1CQ9UNZ2 370 aaKnown RBP30.52■■■□□ 2.48
CPNE1-205ENST00000401607 MBD4O95243 580 aa30.51■■■□□ 2.48
CPNE1-205ENST00000401607 LARGE1O95461 756 aa30.51■■■□□ 2.48
CPNE1-205ENST00000401607 E7EWF7 191 aa30.51■■■□□ 2.47
CPNE1-205ENST00000401607 ATP2B4P23634 1241 aa30.51■■■□□ 2.47
CPNE1-205ENST00000401607 PDE6BP35913 854 aa30.51■■■□□ 2.47
CPNE1-205ENST00000401607 TMC4Q7Z404 712 aa30.51■■■□□ 2.47
CPNE1-205ENST00000401607 GPR101Q96P66 508 aaPredicted RBP30.51■■■□□ 2.47
CPNE1-205ENST00000401607 PODXL2Q9NZ53 605 aa30.51■■■□□ 2.47
CPNE1-205ENST00000401607 RAI14Q9P0K7 980 aa30.51■■■□□ 2.47
CPNE1-205ENST00000401607 PPEF1O14829 653 aaPredicted RBP30.5■■■□□ 2.47
CPNE1-205ENST00000401607 NPR1P16066 1061 aa30.5■■■□□ 2.47
CPNE1-205ENST00000401607 UFL1O94874 794 aa30.49■■■□□ 2.47
CPNE1-205ENST00000401607 TOB2Q14106 344 aaPredicted RBP30.49■■■□□ 2.47
CPNE1-205ENST00000401607 IMMTQ16891 758 aaKnown RBP30.49■■■□□ 2.47
CPNE1-205ENST00000401607 ARMT1Q9H993 441 aa30.49■■■□□ 2.47
CPNE1-205ENST00000401607 GGA1Q9UJY5 639 aa30.49■■■□□ 2.47
CPNE1-205ENST00000401607 ADGRA1Q86SQ6 560 aa30.49■■■□□ 2.47
CPNE1-205ENST00000401607 CYP7A1P22680 504 aa30.48■■■□□ 2.47
CPNE1-205ENST00000401607 SP8Q8IXZ3 490 aa30.48■■■□□ 2.47
CPNE1-205ENST00000401607 ZSCAN31Q96LW9 406 aaPredicted RBP30.48■■■□□ 2.47
CPNE1-205ENST00000401607 HAND2P61296 217 aa30.47■■■□□ 2.47
CPNE1-205ENST00000401607 CHAF1AQ13111 956 aaPredicted RBP30.47■■■□□ 2.47
CPNE1-205ENST00000401607 ANKRD1Q15327 319 aa30.47■■■□□ 2.47
CPNE1-205ENST00000401607 LCORLQ8N3X6 602 aa30.47■■■□□ 2.47
CPNE1-205ENST00000401607 TDRD7Q8NHU6 1098 aaKnown RBP30.47■■■□□ 2.47
CPNE1-205ENST00000401607 ZNF384Q8TF68 577 aa30.47■■■□□ 2.47
CPNE1-205ENST00000401607 TPCN1Q9ULQ1 816 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms