RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 TDO2P48775 406 aa7.37□□□□□ -1.23
CLIP4-202ENST00000401605 HDLBPQ00341 1268 aaKnown RBP7.37□□□□□ -1.23
CLIP4-202ENST00000401605 LONRF3Q496Y0 759 aa7.37□□□□□ -1.23
CLIP4-202ENST00000401605 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.37□□□□□ -1.23
CLIP4-202ENST00000401605 ATL2Q8NHH9 583 aa7.37□□□□□ -1.23
CLIP4-202ENST00000401605 TANGO6Q9C0B7 1094 aa7.37□□□□□ -1.23
CLIP4-202ENST00000401605 SMC3Q9UQE7 1217 aa7.37□□□□□ -1.23
CLIP4-202ENST00000401605 TMA7Q9Y2S6 64 aaKnown RBP7.37□□□□□ -1.23
CLIP4-202ENST00000401605 KIF3CO14782 793 aa7.36□□□□□ -1.23
CLIP4-202ENST00000401605 CTAGE5O15320 804 aa7.36□□□□□ -1.23
CLIP4-202ENST00000401605 COQ9O75208 318 aa7.36□□□□□ -1.23
CLIP4-202ENST00000401605 C4AP0C0L4 1744 aa7.36□□□□□ -1.23
CLIP4-202ENST00000401605 LIG1P18858 919 aa7.36□□□□□ -1.23
CLIP4-202ENST00000401605 COL5A3P25940 1745 aaPredicted RBP7.36□□□□□ -1.23
CLIP4-202ENST00000401605 MCM10Q7L590 875 aa7.36□□□□□ -1.23
CLIP4-202ENST00000401605 PIK3R5Q8WYR1 880 aa7.36□□□□□ -1.23
CLIP4-202ENST00000401605 BRMS1Q9HCU9 246 aa7.36□□□□□ -1.23
CLIP4-202ENST00000401605 KIF3AQ9Y496 699 aa7.36□□□□□ -1.23
CLIP4-202ENST00000401605 PCDHB15Q9Y5E8 787 aa7.36□□□□□ -1.23
CLIP4-202ENST00000401605 KCNQ3O43525 872 aa7.36□□□□□ -1.23
CLIP4-202ENST00000401605 A1BGP04217 495 aa7.36□□□□□ -1.23
CLIP4-202ENST00000401605 SNRPA1P09661 255 aaKnown RBP7.36□□□□□ -1.23
CLIP4-202ENST00000401605 ZKSCAN2Q63HK3 967 aa7.36□□□□□ -1.23
CLIP4-202ENST00000401605 BICDL1Q6ZP65 573 aa7.36□□□□□ -1.23
CLIP4-202ENST00000401605 NOP9Q86U38 636 aaKnown RBP7.36□□□□□ -1.23
CLIP4-202ENST00000401605 CREBRFQ8IUR6 639 aa7.36□□□□□ -1.23
CLIP4-202ENST00000401605 TIGD1Q96MW7 591 aa7.36□□□□□ -1.23
CLIP4-202ENST00000401605 ADAMTS7Q9UKP4 1686 aa7.36□□□□□ -1.23
CLIP4-202ENST00000401605 CHD4Q14839 1912 aa7.36□□□□□ -1.23
CLIP4-202ENST00000401605 H0YIN7 160 aa7.35□□□□□ -1.23
CLIP4-202ENST00000401605 DYNC1I1O14576 645 aa7.35□□□□□ -1.23
CLIP4-202ENST00000401605 PEX14O75381 377 aa7.35□□□□□ -1.23
CLIP4-202ENST00000401605 NEFHP12036 1026 aa7.35□□□□□ -1.23
CLIP4-202ENST00000401605 ZC3H12AQ5D1E8 599 aaKnown RBP7.35□□□□□ -1.23
CLIP4-202ENST00000401605 TBC1D9BQ66K14 1250 aa7.35□□□□□ -1.23
CLIP4-202ENST00000401605 HELBQ8NG08 1087 aaPredicted RBP7.35□□□□□ -1.23
CLIP4-202ENST00000401605 NOVA2Q9UNW9 492 aaKnown RBP7.35□□□□□ -1.23
CLIP4-202ENST00000401605 PDZRN3Q9UPQ7 1066 aa7.35□□□□□ -1.23
CLIP4-202ENST00000401605 USP16Q9Y5T5 823 aa7.35□□□□□ -1.23
CLIP4-202ENST00000401605 TJP1Q07157 1748 aa7.35□□□□□ -1.23
CLIP4-202ENST00000401605 KLHL33A6NCF5 533 aa7.35□□□□□ -1.23
CLIP4-202ENST00000401605 TULP2O00295 520 aa7.35□□□□□ -1.23
CLIP4-202ENST00000401605 EPB41L2O43491 1005 aaKnown RBP7.35□□□□□ -1.23
CLIP4-202ENST00000401605 CAMTA2O94983 1202 aa7.35□□□□□ -1.23
CLIP4-202ENST00000401605 IPO7O95373 1038 aaKnown RBP7.35□□□□□ -1.23
CLIP4-202ENST00000401605 PARNO95453 639 aaKnown RBP7.35□□□□□ -1.23
CLIP4-202ENST00000401605 MAP4K4O95819 1239 aaPredicted RBP7.35□□□□□ -1.23
CLIP4-202ENST00000401605 RIPK4P57078 832 aa7.35□□□□□ -1.23
CLIP4-202ENST00000401605 DCTN1Q14203 1278 aa7.35□□□□□ -1.23
CLIP4-202ENST00000401605 TAF7Q15545 349 aaPredicted RBP7.35□□□□□ -1.23
CLIP4-202ENST00000401605 EGFLAMQ63HQ2 1017 aa7.35□□□□□ -1.23
CLIP4-202ENST00000401605 RSBN1LQ6PCB5 846 aaPredicted RBP7.35□□□□□ -1.23
CLIP4-202ENST00000401605 C2CD5Q86YS7 1000 aa7.35□□□□□ -1.23
CLIP4-202ENST00000401605 TTLL6Q8N841 843 aa7.35□□□□□ -1.23
CLIP4-202ENST00000401605 SPACA7Q96KW9 195 aa7.35□□□□□ -1.23
CLIP4-202ENST00000401605 PIF1Q9H611 641 aa7.35□□□□□ -1.23
CLIP4-202ENST00000401605 CARMIL3Q8ND23 1372 aa7.35□□□□□ -1.23
CLIP4-202ENST00000401605 SCN11AQ9UI33 1791 aa7.35□□□□□ -1.23
CLIP4-202ENST00000401605 TLDC2A0PJX2 215 aa7.34□□□□□ -1.23
CLIP4-202ENST00000401605 LILRB3O75022 631 aa7.34□□□□□ -1.23
CLIP4-202ENST00000401605 HSPA6P17066 643 aa7.34□□□□□ -1.23
CLIP4-202ENST00000401605 PDE6BP35913 854 aa7.34□□□□□ -1.23
CLIP4-202ENST00000401605 GTF2A1P52655 376 aaPredicted RBP7.34□□□□□ -1.23
CLIP4-202ENST00000401605 RAD51AP2Q09MP3 1159 aa7.34□□□□□ -1.23
CLIP4-202ENST00000401605 CCDC144BQ3MJ40 725 aa7.34□□□□□ -1.23
CLIP4-202ENST00000401605 DZIP3Q86Y13 1208 aaKnown RBP7.34□□□□□ -1.23
CLIP4-202ENST00000401605 PNISRQ8TF01 805 aaKnown RBP7.34□□□□□ -1.23
CLIP4-202ENST00000401605 L3MBTL3Q96JM7 780 aaPredicted RBP7.34□□□□□ -1.23
CLIP4-202ENST00000401605 SETDB2Q96T68 719 aa7.34□□□□□ -1.23
CLIP4-202ENST00000401605 BRIP1Q9BX63 1249 aa7.34□□□□□ -1.23
CLIP4-202ENST00000401605 RNF181Q9P0P0 153 aa7.34□□□□□ -1.23
CLIP4-202ENST00000401605 MYH14Q7Z406 1995 aaKnown RBP7.34□□□□□ -1.23
CLIP4-202ENST00000401605 MOXD2PA6NHM9 499 aa7.34□□□□□ -1.23
CLIP4-202ENST00000401605 NPHP1O15259 732 aa7.34□□□□□ -1.23
CLIP4-202ENST00000401605 SPTLC1O15269 473 aa7.34□□□□□ -1.23
CLIP4-202ENST00000401605 TOMM70O94826 608 aa7.34□□□□□ -1.23
CLIP4-202ENST00000401605 TNNT3P45378 269 aaPredicted RBP7.34□□□□□ -1.23
CLIP4-202ENST00000401605 RHBDL3P58872 404 aa7.34□□□□□ -1.23
CLIP4-202ENST00000401605 ELOAQ14241 798 aaKnown RBP7.34□□□□□ -1.23
CLIP4-202ENST00000401605 CHADLQ6NUI6 762 aa7.34□□□□□ -1.23
CLIP4-202ENST00000401605 CLEC4GQ6UXB4 293 aa7.34□□□□□ -1.23
CLIP4-202ENST00000401605 CNBD1Q8NA66 436 aa7.34□□□□□ -1.23
CLIP4-202ENST00000401605 MED4Q9NPJ6 270 aa7.34□□□□□ -1.23
CLIP4-202ENST00000401605 IQSEC3Q9UPP2 1182 aaPredicted RBP7.34□□□□□ -1.23
CLIP4-202ENST00000401605 ZNF652Q9Y2D9 606 aa7.34□□□□□ -1.23
CLIP4-202ENST00000401605 PRAMEF22A3QJZ6 481 aa7.33□□□□□ -1.24
CLIP4-202ENST00000401605 PPP1R12AO14974 1030 aaPredicted RBP7.33□□□□□ -1.24
CLIP4-202ENST00000401605 DIXDC1Q155Q3 683 aa7.33□□□□□ -1.24
CLIP4-202ENST00000401605 C1QTNF12Q5T7M4 302 aa7.33□□□□□ -1.24
CLIP4-202ENST00000401605 PRR5LQ6MZQ0 368 aa7.33□□□□□ -1.24
CLIP4-202ENST00000401605 PLEKHF1Q96S99 279 aa7.33□□□□□ -1.24
CLIP4-202ENST00000401605 UBA5Q9GZZ9 404 aa7.33□□□□□ -1.24
CLIP4-202ENST00000401605 NUCKS1Q9H1E3 243 aaKnown RBP7.33□□□□□ -1.24
CLIP4-202ENST00000401605 KDM2BQ8NHM5 1336 aa7.33□□□□□ -1.24
CLIP4-202ENST00000401605 CAPN2P17655 700 aa7.33□□□□□ -1.24
CLIP4-202ENST00000401605 NDUFV2P19404 249 aa7.33□□□□□ -1.24
CLIP4-202ENST00000401605 ST5P78524 1137 aa7.33□□□□□ -1.24
CLIP4-202ENST00000401605 NFE2L2Q16236 605 aa7.33□□□□□ -1.24
CLIP4-202ENST00000401605 CACTIN-AS1Q8N1I8 211 aa7.33□□□□□ -1.24
CLIP4-202ENST00000401605 TMC2Q8TDI7 906 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms