RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 AACSQ86V21 672 aa18.95■□□□□ 0.62
CHRFAM7A-203ENST00000401522 SP8Q8IXZ3 490 aa18.95■□□□□ 0.62
CHRFAM7A-203ENST00000401522 KLHL34Q8N239 644 aa18.95■□□□□ 0.62
CHRFAM7A-203ENST00000401522 ZSCAN31Q96LW9 406 aaPredicted RBP18.95■□□□□ 0.62
CHRFAM7A-203ENST00000401522 CEP126Q9P2H0 1117 aa18.95■□□□□ 0.62
CHRFAM7A-203ENST00000401522 PPEF1O14829 653 aaPredicted RBP18.94■□□□□ 0.62
CHRFAM7A-203ENST00000401522 CASTP20810 708 aaKnown RBP18.94■□□□□ 0.62
CHRFAM7A-203ENST00000401522 CHRNDQ07001 517 aa18.94■□□□□ 0.62
CHRFAM7A-203ENST00000401522 METTL24Q5JXM2 366 aa18.94■□□□□ 0.62
CHRFAM7A-203ENST00000401522 PRPF40BQ6NWY9 871 aaKnown RBP18.94■□□□□ 0.62
CHRFAM7A-203ENST00000401522 USP48Q86UV5 1035 aa18.94■□□□□ 0.62
CHRFAM7A-203ENST00000401522 TTLL6Q8N841 843 aa18.94■□□□□ 0.62
CHRFAM7A-203ENST00000401522 VGLL2Q8N8G2 317 aa18.94■□□□□ 0.62
CHRFAM7A-203ENST00000401522 PIM2Q9P1W9 311 aa18.94■□□□□ 0.62
CHRFAM7A-203ENST00000401522 SMC3Q9UQE7 1217 aa18.94■□□□□ 0.62
CHRFAM7A-203ENST00000401522 ATP6V0A2Q9Y487 856 aa18.94■□□□□ 0.62
CHRFAM7A-203ENST00000401522 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.94■□□□□ 0.62
CHRFAM7A-203ENST00000401522 PDE8BO95263 885 aa18.94■□□□□ 0.62
CHRFAM7A-203ENST00000401522 FHDC1Q9C0D6 1143 aaPredicted RBP18.94■□□□□ 0.62
CHRFAM7A-203ENST00000401522 SH2B1Q9NRF2 756 aaPredicted RBP18.94■□□□□ 0.62
CHRFAM7A-203ENST00000401522 ATP6V1DQ9Y5K8 247 aa18.94■□□□□ 0.62
CHRFAM7A-203ENST00000401522 STX6O43752 255 aa18.93■□□□□ 0.62
CHRFAM7A-203ENST00000401522 ANKRD2Q9GZV1 360 aa18.93■□□□□ 0.62
CHRFAM7A-203ENST00000401522 ZSWIM6Q9HCJ5 1215 aa18.93■□□□□ 0.62
CHRFAM7A-203ENST00000401522 GPR108Q9NPR9 543 aa18.93■□□□□ 0.62
CHRFAM7A-203ENST00000401522 NOL7Q9UMY1 257 aaKnown RBP18.93■□□□□ 0.62
CHRFAM7A-203ENST00000401522 PTH1RQ03431 593 aa18.92■□□□□ 0.62
CHRFAM7A-203ENST00000401522 C7orf43Q8WVR3 580 aa18.92■□□□□ 0.62
CHRFAM7A-203ENST00000401522 SNRKQ9NRH2 765 aa18.92■□□□□ 0.62
CHRFAM7A-203ENST00000401522 PDRG1Q9NUG6 133 aa18.92■□□□□ 0.62
CHRFAM7A-203ENST00000401522 CYP46A1Q9Y6A2 500 aa18.92■□□□□ 0.62
CHRFAM7A-203ENST00000401522 CCDC171Q6TFL3 1326 aa18.92■□□□□ 0.62
CHRFAM7A-203ENST00000401522 SLX4Q8IY92 1834 aa18.92■□□□□ 0.62
CHRFAM7A-203ENST00000401522 JAKMIP1Q96N16 626 aaKnown RBP18.92■□□□□ 0.62
CHRFAM7A-203ENST00000401522 LRRC37AA6NMS7 1700 aa18.91■□□□□ 0.62
CHRFAM7A-203ENST00000401522 GADD45BO75293 160 aaPredicted RBP18.91■□□□□ 0.62
CHRFAM7A-203ENST00000401522 ZKSCAN1P17029 563 aaPredicted RBP18.91■□□□□ 0.62
CHRFAM7A-203ENST00000401522 SYT1P21579 422 aa18.91■□□□□ 0.62
CHRFAM7A-203ENST00000401522 MCM5P33992 734 aa18.91■□□□□ 0.62
CHRFAM7A-203ENST00000401522 NECTIN1Q15223 517 aa18.91■□□□□ 0.62
CHRFAM7A-203ENST00000401522 NLGN2Q8NFZ4 835 aa18.91■□□□□ 0.62
CHRFAM7A-203ENST00000401522 HELBQ8NG08 1087 aaPredicted RBP18.91■□□□□ 0.62
CHRFAM7A-203ENST00000401522 AKAP2Q9Y2D5 859 aa18.91■□□□□ 0.62
CHRFAM7A-203ENST00000401522 TAF5LO75529 589 aa18.9■□□□□ 0.62
CHRFAM7A-203ENST00000401522 LETM1O95202 739 aaPredicted RBP18.9■□□□□ 0.62
CHRFAM7A-203ENST00000401522 TNNI3KQ59H18 835 aa18.9■□□□□ 0.62
CHRFAM7A-203ENST00000401522 SYT17Q9BSW7 474 aa18.9■□□□□ 0.62
CHRFAM7A-203ENST00000401522 CCDC39Q9UFE4 941 aa18.9■□□□□ 0.62
CHRFAM7A-203ENST00000401522 FPGT-TNNI3KV9GXZ4 949 aa18.9■□□□□ 0.62
CHRFAM7A-203ENST00000401522 BRCA1P38398 1863 aaKnown RBP18.9■□□□□ 0.62
CHRFAM7A-203ENST00000401522 F13A1P00488 732 aa18.9■□□□□ 0.62
CHRFAM7A-203ENST00000401522 CSPP1Q1MSJ5 1256 aa18.9■□□□□ 0.62
CHRFAM7A-203ENST00000401522 DALRD3Q5D0E6 543 aaKnown RBP18.9■□□□□ 0.62
CHRFAM7A-203ENST00000401522 SLC51AQ86UW1 340 aa18.9■□□□□ 0.62
CHRFAM7A-203ENST00000401522 EAF2Q96CJ1 260 aaPredicted RBP18.9■□□□□ 0.62
CHRFAM7A-203ENST00000401522 TMX4Q9H1E5 349 aaPredicted RBP18.9■□□□□ 0.62
CHRFAM7A-203ENST00000401522 GDPD2Q9HCC8 539 aa18.9■□□□□ 0.62
CHRFAM7A-203ENST00000401522 PODXL2Q9NZ53 605 aa18.9■□□□□ 0.62
CHRFAM7A-203ENST00000401522 CACNA1SQ13698 1873 aa18.89■□□□□ 0.62
CHRFAM7A-203ENST00000401522 XDHP47989 1333 aa18.89■□□□□ 0.61
CHRFAM7A-203ENST00000401522 OFD1O75665 1012 aa18.89■□□□□ 0.61
CHRFAM7A-203ENST00000401522 FGFR2P21802 821 aa18.89■□□□□ 0.61
CHRFAM7A-203ENST00000401522 UBE2HP62256 183 aa18.89■□□□□ 0.61
CHRFAM7A-203ENST00000401522 PUM3Q15397 648 aaKnown RBP18.89■□□□□ 0.61
CHRFAM7A-203ENST00000401522 FOXD4L6Q3SYB3 417 aaPredicted RBP18.89■□□□□ 0.61
CHRFAM7A-203ENST00000401522 CCDC183Q5T5S1 534 aa18.89■□□□□ 0.61
CHRFAM7A-203ENST00000401522 CC2D2BQ6DHV5 1058 aa18.89■□□□□ 0.61
CHRFAM7A-203ENST00000401522 FOXD4L3Q6VB84 417 aaPredicted RBP18.89■□□□□ 0.61
CHRFAM7A-203ENST00000401522 FAM184AQ8NB25 1140 aa18.89■□□□□ 0.61
CHRFAM7A-203ENST00000401522 ANKIB1Q9P2G1 1089 aa18.89■□□□□ 0.61
CHRFAM7A-203ENST00000401522 A0A1B0GUL6 1792 aa18.89■□□□□ 0.61
CHRFAM7A-203ENST00000401522 ZNF500O60304 480 aaPredicted RBP18.88■□□□□ 0.61
CHRFAM7A-203ENST00000401522 TPM2P07951 284 aa18.88■□□□□ 0.61
CHRFAM7A-203ENST00000401522 PDIA4P13667 645 aaKnown RBP18.88■□□□□ 0.61
CHRFAM7A-203ENST00000401522 GPSM2P81274 684 aa18.88■□□□□ 0.61
CHRFAM7A-203ENST00000401522 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.88■□□□□ 0.61
CHRFAM7A-203ENST00000401522 CNPY2Q9Y2B0 182 aa18.88■□□□□ 0.61
CHRFAM7A-203ENST00000401522 RBM8AQ9Y5S9 174 aaKnown RBP18.88■□□□□ 0.61
CHRFAM7A-203ENST00000401522 CPA1P15085 419 aa18.88■□□□□ 0.61
CHRFAM7A-203ENST00000401522 PSMA5P28066 241 aa18.88■□□□□ 0.61
CHRFAM7A-203ENST00000401522 TIMM10P62072 90 aa18.88■□□□□ 0.61
CHRFAM7A-203ENST00000401522 NMIQ13287 307 aaPredicted RBP18.88■□□□□ 0.61
CHRFAM7A-203ENST00000401522 UBE4AQ14139 1066 aa18.88■□□□□ 0.61
CHRFAM7A-203ENST00000401522 ADCK5Q3MIX3 580 aa18.88■□□□□ 0.61
CHRFAM7A-203ENST00000401522 GRIPAP1Q4V328 841 aa18.88■□□□□ 0.61
CHRFAM7A-203ENST00000401522 CREB3L3Q68CJ9 461 aa18.88■□□□□ 0.61
CHRFAM7A-203ENST00000401522 LPIN2Q92539 896 aa18.88■□□□□ 0.61
CHRFAM7A-203ENST00000401522 MAP4K1Q92918 833 aa18.88■□□□□ 0.61
CHRFAM7A-203ENST00000401522 LEMD3Q9Y2U8 911 aa18.88■□□□□ 0.61
CHRFAM7A-203ENST00000401522 A0A1B0GUL7 405 aa18.87■□□□□ 0.61
CHRFAM7A-203ENST00000401522 ATP2B3Q16720 1220 aa18.87■□□□□ 0.61
CHRFAM7A-203ENST00000401522 UVSSAQ2YD98 709 aa18.87■□□□□ 0.61
CHRFAM7A-203ENST00000401522 OLFM4Q6UX06 510 aa18.87■□□□□ 0.61
CHRFAM7A-203ENST00000401522 SRCAPQ6ZRS2 3230 aa18.87■□□□□ 0.61
CHRFAM7A-203ENST00000401522 C21orf2O43822 256 aa18.86■□□□□ 0.61
CHRFAM7A-203ENST00000401522 LARGE1O95461 756 aa18.86■□□□□ 0.61
CHRFAM7A-203ENST00000401522 GJB2P29033 226 aa18.86■□□□□ 0.61
CHRFAM7A-203ENST00000401522 KCNJ4P48050 445 aa18.86■□□□□ 0.61
CHRFAM7A-203ENST00000401522 CCDC83Q8IWF9 413 aa18.86■□□□□ 0.61
CHRFAM7A-203ENST00000401522 MPNDQ8N594 471 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms