RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 AOX1Q06278 1338 aa14.12□□□□□ -0.15
SKA3-203ENST00000400018 PRKAB2O43741 272 aa14.12□□□□□ -0.15
SKA3-203ENST00000400018 HAND2P61296 217 aa14.12□□□□□ -0.15
SKA3-203ENST00000400018 DIXDC1Q155Q3 683 aa14.12□□□□□ -0.15
SKA3-203ENST00000400018 LRP2BPQ9P2M1 347 aa14.12□□□□□ -0.15
SKA3-203ENST00000400018 GGA1Q9UJY5 639 aa14.12□□□□□ -0.15
SKA3-203ENST00000400018 PCDHAC2Q9Y5I4 1007 aa14.12□□□□□ -0.15
SKA3-203ENST00000400018 ZNF532Q9HCE3 1301 aa14.11□□□□□ -0.15
SKA3-203ENST00000400018 AOC3Q16853 763 aa14.11□□□□□ -0.15
SKA3-203ENST00000400018 CAVIN4Q5BKX8 364 aa14.11□□□□□ -0.15
SKA3-203ENST00000400018 DPP8Q6V1X1 898 aaPredicted RBP14.11□□□□□ -0.15
SKA3-203ENST00000400018 CCDC125Q86Z20 511 aa14.11□□□□□ -0.15
SKA3-203ENST00000400018 NKX2-3Q8TAU0 364 aa14.11□□□□□ -0.15
SKA3-203ENST00000400018 UPF2Q9HAU5 1272 aaKnown RBP14.11□□□□□ -0.15
SKA3-203ENST00000400018 RAI14Q9P0K7 980 aa14.11□□□□□ -0.15
SKA3-203ENST00000400018 ANP32AP39687 249 aaKnown RBP14.11□□□□□ -0.15
SKA3-203ENST00000400018 PTGER2P43116 358 aa14.11□□□□□ -0.15
SKA3-203ENST00000400018 UBE4AQ14139 1066 aa14.11□□□□□ -0.15
SKA3-203ENST00000400018 ADCK5Q3MIX3 580 aa14.11□□□□□ -0.15
SKA3-203ENST00000400018 CASC1Q6TDU7 716 aa14.11□□□□□ -0.15
SKA3-203ENST00000400018 MPNDQ8N594 471 aa14.11□□□□□ -0.15
SKA3-203ENST00000400018 LSG1Q9H089 658 aaKnown RBP14.11□□□□□ -0.15
SKA3-203ENST00000400018 MAST3O60307 1309 aa14.11□□□□□ -0.15
SKA3-203ENST00000400018 XDHP47989 1333 aa14.11□□□□□ -0.15
SKA3-203ENST00000400018 RGPD3A6NKT7 1758 aaPredicted RBP14.1□□□□□ -0.15
SKA3-203ENST00000400018 RGPD4Q7Z3J3 1758 aa14.1□□□□□ -0.15
SKA3-203ENST00000400018 RGL2O15211 777 aa14.1□□□□□ -0.15
SKA3-203ENST00000400018 ARID4AP29374 1257 aaPredicted RBP14.1□□□□□ -0.15
SKA3-203ENST00000400018 DYNLL1P63167 89 aaKnown RBP14.1□□□□□ -0.15
SKA3-203ENST00000400018 ZNF277Q9NRM2 450 aaPredicted RBP14.1□□□□□ -0.15
SKA3-203ENST00000400018 ATP6V0A2Q9Y487 856 aa14.1□□□□□ -0.15
SKA3-203ENST00000400018 CRAMP1Q96RY5 1269 aa14.1□□□□□ -0.15
SKA3-203ENST00000400018 MTFR1LQ9H019 292 aa14.1□□□□□ -0.15
SKA3-203ENST00000400018 ARMT1Q9H993 441 aa14.1□□□□□ -0.15
SKA3-203ENST00000400018 SCAF8Q9UPN6 1271 aaKnown RBP14.1□□□□□ -0.15
SKA3-203ENST00000400018 BCS1LQ9Y276 419 aa14.1□□□□□ -0.15
SKA3-203ENST00000400018 BBOX1O75936 387 aa14.09□□□□□ -0.15
SKA3-203ENST00000400018 GTF2IP78347 998 aa14.09□□□□□ -0.15
SKA3-203ENST00000400018 FBXO33Q7Z6M2 555 aa14.09□□□□□ -0.15
SKA3-203ENST00000400018 IRS2Q9Y4H2 1338 aa14.09□□□□□ -0.15
SKA3-203ENST00000400018 A0A1B0GUL6 1792 aa14.09□□□□□ -0.15
SKA3-203ENST00000400018 CHD4Q14839 1912 aa14.09□□□□□ -0.15
SKA3-203ENST00000400018 FOXP2O15409 715 aa14.09□□□□□ -0.15
SKA3-203ENST00000400018 PDE6AP16499 860 aa14.09□□□□□ -0.15
SKA3-203ENST00000400018 RNF113AO15541 343 aaKnown RBP14.08□□□□□ -0.15
SKA3-203ENST00000400018 CHST3Q7LGC8 479 aa14.08□□□□□ -0.15
SKA3-203ENST00000400018 SDR42E1Q8WUS8 393 aa14.08□□□□□ -0.15
SKA3-203ENST00000400018 ANKRD2Q9GZV1 360 aa14.08□□□□□ -0.15
SKA3-203ENST00000400018 SLURP2P0DP57 97 aa14.08□□□□□ -0.16
SKA3-203ENST00000400018 LRRC2Q9BYS8 371 aa14.08□□□□□ -0.16
SKA3-203ENST00000400018 CD209Q9NNX6 404 aa14.08□□□□□ -0.16
SKA3-203ENST00000400018 RBM8AQ9Y5S9 174 aaKnown RBP14.08□□□□□ -0.16
SKA3-203ENST00000400018 NRXN2Q9P2S2 1712 aa14.08□□□□□ -0.16
SKA3-203ENST00000400018 SOCS7O14512 581 aa14.07□□□□□ -0.16
SKA3-203ENST00000400018 SP8Q8IXZ3 490 aa14.07□□□□□ -0.16
SKA3-203ENST00000400018 POLD1P28340 1107 aa14.07□□□□□ -0.16
SKA3-203ENST00000400018 ALDH1B1P30837 517 aa14.07□□□□□ -0.16
SKA3-203ENST00000400018 SCNN1DP51172 638 aa14.07□□□□□ -0.16
SKA3-203ENST00000400018 LCORLQ8N3X6 602 aa14.07□□□□□ -0.16
SKA3-203ENST00000400018 SGIP1Q9BQI5 828 aa14.07□□□□□ -0.16
SKA3-203ENST00000400018 CYP2D7A0A087X1C5 515 aa14.06□□□□□ -0.16
SKA3-203ENST00000400018 PPFIA3O75145 1194 aa14.06□□□□□ -0.16
SKA3-203ENST00000400018 APPP05067 770 aa14.06□□□□□ -0.16
SKA3-203ENST00000400018 CHMP4CQ96CF2 233 aa14.06□□□□□ -0.16
SKA3-203ENST00000400018 GPAA1O43292 621 aa14.06□□□□□ -0.16
SKA3-203ENST00000400018 MBD4O95243 580 aa14.06□□□□□ -0.16
SKA3-203ENST00000400018 CYP7A1P22680 504 aa14.06□□□□□ -0.16
SKA3-203ENST00000400018 MCMDC2Q4G0Z9 681 aa14.06□□□□□ -0.16
SKA3-203ENST00000400018 ZMYM1Q5SVZ6 1142 aa14.06□□□□□ -0.16
SKA3-203ENST00000400018 KIAA1211Q6ZU35 1233 aa14.06□□□□□ -0.16
SKA3-203ENST00000400018 TTLL6Q8N841 843 aa14.06□□□□□ -0.16
SKA3-203ENST00000400018 ZC3H12CQ9C0D7 883 aaKnown RBP14.06□□□□□ -0.16
SKA3-203ENST00000400018 AATFQ9NY61 560 aaKnown RBP eCLIP14.06□□□□□ -0.16
SKA3-203ENST00000400018 CCDC171Q6TFL3 1326 aa14.06□□□□□ -0.16
SKA3-203ENST00000400018 UQCRFS1P1P0C7P4 283 aa14.06□□□□□ -0.16
SKA3-203ENST00000400018 ADD2P35612 726 aa14.06□□□□□ -0.16
SKA3-203ENST00000400018 RASSF7Q02833 373 aa14.06□□□□□ -0.16
SKA3-203ENST00000400018 MECOMQ03112 1051 aa14.06□□□□□ -0.16
SKA3-203ENST00000400018 C7orf43Q8WVR3 580 aa14.06□□□□□ -0.16
SKA3-203ENST00000400018 SLKQ9H2G2 1235 aaPredicted RBP14.06□□□□□ -0.16
SKA3-203ENST00000400018 MYH13Q9UKX3 1938 aa14.05□□□□□ -0.16
SKA3-203ENST00000400018 DUOX1Q9NRD9 1551 aa14.05□□□□□ -0.16
SKA3-203ENST00000400018 G3V3G9 751 aa14.05□□□□□ -0.16
SKA3-203ENST00000400018 DCAF8Q5TAQ9 597 aa14.05□□□□□ -0.16
SKA3-203ENST00000400018 CERS5Q8N5B7 392 aa14.05□□□□□ -0.16
SKA3-203ENST00000400018 TBC1D2Q9BYX2 928 aa14.05□□□□□ -0.16
SKA3-203ENST00000400018 FHDC1Q9C0D6 1143 aaPredicted RBP14.05□□□□□ -0.16
SKA3-203ENST00000400018 TCRBV5S4A2TA0A5A2 114 aa14.05□□□□□ -0.16
SKA3-203ENST00000400018 RAD17O75943 681 aa14.05□□□□□ -0.16
SKA3-203ENST00000400018 REC8O95072 547 aa14.05□□□□□ -0.16
SKA3-203ENST00000400018 HSPD1P10809 573 aaKnown RBP14.05□□□□□ -0.16
SKA3-203ENST00000400018 LEMD3Q9Y2U8 911 aa14.04□□□□□ -0.16
SKA3-203ENST00000400018 ZBTB12Q9Y330 459 aaPredicted RBP14.04□□□□□ -0.16
SKA3-203ENST00000400018 SNX14Q9Y5W7 946 aa14.04□□□□□ -0.16
SKA3-203ENST00000400018 C10orf71Q711Q0 1435 aa14.04□□□□□ -0.16
SKA3-203ENST00000400018 SHTN1A0MZ66 631 aa14.04□□□□□ -0.16
SKA3-203ENST00000400018 MFSD14BQ5SR56 506 aa14.04□□□□□ -0.16
SKA3-203ENST00000400018 SLC16A10Q8TF71 515 aa14.04□□□□□ -0.16
SKA3-203ENST00000400018 TAOK2Q9UL54 1235 aa14.04□□□□□ -0.16
SKA3-203ENST00000400018 RAD50Q92878 1312 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms