RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 ETF1P62495 437 aaKnown RBP19.79■□□□□ 0.76
PTPRA-205ENST00000399903 SLC20A2Q08357 652 aa19.79■□□□□ 0.76
PTPRA-205ENST00000399903 UBE3BQ7Z3V4 1068 aa19.79■□□□□ 0.76
PTPRA-205ENST00000399903 NBPF11Q86T75 865 aa19.79■□□□□ 0.76
PTPRA-205ENST00000399903 Q6ZUG5 572 aa19.79■□□□□ 0.76
PTPRA-205ENST00000399903 LINS1Q8NG48 757 aa19.79■□□□□ 0.76
PTPRA-205ENST00000399903 AK7Q96M32 723 aa19.79■□□□□ 0.76
PTPRA-205ENST00000399903 CWC15Q9P013 229 aaKnown RBP19.79■□□□□ 0.76
PTPRA-205ENST00000399903 RESTQ13127 1097 aa19.78■□□□□ 0.76
PTPRA-205ENST00000399903 SEC62Q99442 399 aaKnown RBP19.78■□□□□ 0.76
PTPRA-205ENST00000399903 L2HGDHQ9H9P8 463 aa19.78■□□□□ 0.76
PTPRA-205ENST00000399903 STRCP1A6NGW2 1772 aa19.78■□□□□ 0.76
PTPRA-205ENST00000399903 SLAIN2Q9P270 581 aa19.78■□□□□ 0.76
PTPRA-205ENST00000399903 SERPINC1P01008 464 aa19.78■□□□□ 0.76
PTPRA-205ENST00000399903 GNG11P61952 73 aa19.78■□□□□ 0.76
PTPRA-205ENST00000399903 PHACTR2O75167 634 aa19.77■□□□□ 0.76
PTPRA-205ENST00000399903 A1BGP04217 495 aa19.77■□□□□ 0.76
PTPRA-205ENST00000399903 ANKRD13DQ6ZTN6 518 aa19.77■□□□□ 0.76
PTPRA-205ENST00000399903 CTAGE5O15320 804 aa19.77■□□□□ 0.75
PTPRA-205ENST00000399903 NEXNQ0ZGT2 675 aa19.77■□□□□ 0.75
PTPRA-205ENST00000399903 CFAP100Q494V2 611 aa19.77■□□□□ 0.75
PTPRA-205ENST00000399903 EVI5LQ96CN4 794 aa19.77■□□□□ 0.75
PTPRA-205ENST00000399903 USP54Q70EL1 1684 aa19.77■□□□□ 0.75
PTPRA-205ENST00000399903 EVA1CP58658 441 aa19.76■□□□□ 0.75
PTPRA-205ENST00000399903 ZNF589Q86UQ0 364 aaPredicted RBP19.76■□□□□ 0.75
PTPRA-205ENST00000399903 EAF2Q96CJ1 260 aaPredicted RBP19.76■□□□□ 0.75
PTPRA-205ENST00000399903 NCOA5Q9HCD5 579 aaKnown RBP19.76■□□□□ 0.75
PTPRA-205ENST00000399903 ARFGAP3Q9NP61 516 aa19.76■□□□□ 0.75
PTPRA-205ENST00000399903 VPS18Q9P253 973 aa19.76■□□□□ 0.75
PTPRA-205ENST00000399903 TRPM3Q9HCF6 1732 aaPredicted RBP19.76■□□□□ 0.75
PTPRA-205ENST00000399903 SASH1O94885 1247 aa19.76■□□□□ 0.75
PTPRA-205ENST00000399903 CHGBP05060 677 aa19.76■□□□□ 0.75
PTPRA-205ENST00000399903 G3BP1Q13283 466 aaKnown RBP eCLIP19.76■□□□□ 0.75
PTPRA-205ENST00000399903 HSP90AB4PQ58FF6 505 aa19.76■□□□□ 0.75
PTPRA-205ENST00000399903 CREBRFQ8IUR6 639 aa19.76■□□□□ 0.75
PTPRA-205ENST00000399903 CCDC150Q8NCX0 1101 aa19.76■□□□□ 0.75
PTPRA-205ENST00000399903 DCAF5Q96JK2 942 aa19.76■□□□□ 0.75
PTPRA-205ENST00000399903 ZBTB3Q9H5J0 574 aa19.76■□□□□ 0.75
PTPRA-205ENST00000399903 NEURL1BA8MQ27 555 aa19.76■□□□□ 0.75
PTPRA-205ENST00000399903 SNRPA1P09661 255 aaKnown RBP19.76■□□□□ 0.75
PTPRA-205ENST00000399903 OTUD7BQ6GQQ9 843 aa19.76■□□□□ 0.75
PTPRA-205ENST00000399903 CCDC129Q6ZRS4 1044 aa19.76■□□□□ 0.75
PTPRA-205ENST00000399903 CCDC85AQ96PX6 553 aaPredicted RBP19.76■□□□□ 0.75
PTPRA-205ENST00000399903 TNS3Q68CZ2 1445 aa19.76■□□□□ 0.75
PTPRA-205ENST00000399903 POLR3DP05423 398 aaPredicted RBP19.75■□□□□ 0.75
PTPRA-205ENST00000399903 ATP1A3P13637 1013 aa19.75■□□□□ 0.75
PTPRA-205ENST00000399903 MAP4K1Q92918 833 aa19.75■□□□□ 0.75
PTPRA-205ENST00000399903 LEKR1Q6ZMV7 388 aa19.75■□□□□ 0.75
PTPRA-205ENST00000399903 TTLL7Q6ZT98 887 aa19.75■□□□□ 0.75
PTPRA-205ENST00000399903 GPATCH11Q8N954 259 aa19.75■□□□□ 0.75
PTPRA-205ENST00000399903 PLEKHA4Q9H4M7 779 aa19.75■□□□□ 0.75
PTPRA-205ENST00000399903 ALDH1L1O75891 902 aa19.74■□□□□ 0.75
PTPRA-205ENST00000399903 ZRANB2O95218 330 aaKnown RBP eCLIP19.74■□□□□ 0.75
PTPRA-205ENST00000399903 FAM160A1Q05DH4 1040 aa19.74■□□□□ 0.75
PTPRA-205ENST00000399903 CHST3Q7LGC8 479 aa19.74■□□□□ 0.75
PTPRA-205ENST00000399903 RRP15Q9Y3B9 282 aaKnown RBP19.74■□□□□ 0.75
PTPRA-205ENST00000399903 HEG1Q9ULI3 1381 aa19.74■□□□□ 0.75
PTPRA-205ENST00000399903 ADAM21Q9UKJ8 722 aa19.74■□□□□ 0.75
PTPRA-205ENST00000399903 DHX16O60231 1041 aaKnown RBP19.74■□□□□ 0.75
PTPRA-205ENST00000399903 TBC1D8O95759 1140 aa19.74■□□□□ 0.75
PTPRA-205ENST00000399903 GCKRQ14397 625 aa19.74■□□□□ 0.75
PTPRA-205ENST00000399903 CCDC93Q567U6 631 aa19.73■□□□□ 0.75
PTPRA-205ENST00000399903 ZCRB1Q8TBF4 217 aaKnown RBP19.73■□□□□ 0.75
PTPRA-205ENST00000399903 DRC1Q96MC2 740 aa19.73■□□□□ 0.75
PTPRA-205ENST00000399903 KDM3BQ7LBC6 1761 aa19.73■□□□□ 0.75
PTPRA-205ENST00000399903 A0A087WZG4 1122 aa19.73■□□□□ 0.75
PTPRA-205ENST00000399903 CASQ1P31415 396 aa19.73■□□□□ 0.75
PTPRA-205ENST00000399903 KARSQ15046 597 aaKnown RBP19.73■□□□□ 0.75
PTPRA-205ENST00000399903 STK38Q15208 465 aa19.73■□□□□ 0.75
PTPRA-205ENST00000399903 CC2D1AQ6P1N0 951 aaPredicted RBP19.73■□□□□ 0.75
PTPRA-205ENST00000399903 NEK1Q96PY6 1258 aa19.73■□□□□ 0.75
PTPRA-205ENST00000399903 PXDNLA1KZ92 1463 aa19.73■□□□□ 0.75
PTPRA-205ENST00000399903 TADA3O75528 432 aa19.73■□□□□ 0.75
PTPRA-205ENST00000399903 RAB11FIP4Q86YS3 637 aa19.73■□□□□ 0.75
PTPRA-205ENST00000399903 GOLGA6L1Q8N7Z2 621 aa19.73■□□□□ 0.75
PTPRA-205ENST00000399903 TTC41PQ6P2S7 1318 aa19.72■□□□□ 0.75
PTPRA-205ENST00000399903 ZSCAN16Q9H4T2 348 aaPredicted RBP19.72■□□□□ 0.75
PTPRA-205ENST00000399903 LMO7Q8WWI1 1683 aa19.72■□□□□ 0.75
PTPRA-205ENST00000399903 NCAPD2Q15021 1401 aa19.72■□□□□ 0.75
PTPRA-205ENST00000399903 APOBRQ0VD83 1088 aa19.72■□□□□ 0.75
PTPRA-205ENST00000399903 TTLL5Q6EMB2 1281 aa19.72■□□□□ 0.75
PTPRA-205ENST00000399903 NBPF26B4DH59 902 aa19.71■□□□□ 0.75
PTPRA-205ENST00000399903 NDUFA8P51970 172 aa19.71■□□□□ 0.75
PTPRA-205ENST00000399903 FAM193AP78312 1265 aa19.71■□□□□ 0.75
PTPRA-205ENST00000399903 NBPF14Q5TI25 921 aa19.71■□□□□ 0.75
PTPRA-205ENST00000399903 NBPF10Q6P3W6 841 aaKnown RBP19.71■□□□□ 0.75
PTPRA-205ENST00000399903 NBPF15Q8N660 670 aa19.71■□□□□ 0.75
PTPRA-205ENST00000399903 PUF60Q9UHX1 559 aaKnown RBP19.71■□□□□ 0.75
PTPRA-205ENST00000399903 KDM4FA0A1W2PPD8 638 aa19.71■□□□□ 0.75
PTPRA-205ENST00000399903 PSDA5PKW4 1024 aaPredicted RBP19.71■□□□□ 0.75
PTPRA-205ENST00000399903 PPP2R3AQ06190 1150 aa19.71■□□□□ 0.75
PTPRA-205ENST00000399903 SCRN1Q12765 414 aa19.71■□□□□ 0.75
PTPRA-205ENST00000399903 METTL22Q9BUU2 404 aaPredicted RBP19.71■□□□□ 0.75
PTPRA-205ENST00000399903 PARD6BQ9BYG5 372 aa19.71■□□□□ 0.75
PTPRA-205ENST00000399903 OSBPL5Q9H0X9 879 aaPredicted RBP19.71■□□□□ 0.75
PTPRA-205ENST00000399903 UBASH3AP57075 661 aa19.71■□□□□ 0.75
PTPRA-205ENST00000399903 FANCCQ00597 558 aa19.71■□□□□ 0.75
PTPRA-205ENST00000399903 LRRFIP1Q32MZ4 808 aaKnown RBP19.71■□□□□ 0.75
PTPRA-205ENST00000399903 WWC2Q6AWC2 1192 aa19.71■□□□□ 0.75
PTPRA-205ENST00000399903 KLHL34Q8N239 644 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms