RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 IGHMBP2P38935 993 aaKnown RBP23.25■■□□□ 1.31
UFD1-202ENST00000399523 NBPF12Q5TAG4 269 aaPredicted RBP23.25■■□□□ 1.31
UFD1-202ENST00000399523 NBPF11Q86T75 865 aa23.25■■□□□ 1.31
UFD1-202ENST00000399523 ANKRD13AQ8IZ07 590 aa23.25■■□□□ 1.31
UFD1-202ENST00000399523 OTUD5Q96G74 571 aa23.25■■□□□ 1.31
UFD1-202ENST00000399523 CD209Q9NNX6 404 aa23.25■■□□□ 1.31
UFD1-202ENST00000399523 PCDHAC2Q9Y5I4 1007 aa23.24■■□□□ 1.31
UFD1-202ENST00000399523 SPDYE2BA6NHP3 402 aa23.23■■□□□ 1.31
UFD1-202ENST00000399523 H0YGN5 161 aa23.23■■□□□ 1.31
UFD1-202ENST00000399523 MYO1BO43795 1136 aa23.23■■□□□ 1.31
UFD1-202ENST00000399523 SPDYE6P0CI01 402 aa23.23■■□□□ 1.31
UFD1-202ENST00000399523 ARHGEF6Q15052 776 aa23.23■■□□□ 1.31
UFD1-202ENST00000399523 SLC9C1Q4G0N8 1177 aa23.23■■□□□ 1.31
UFD1-202ENST00000399523 KSR2Q6VAB6 950 aa23.23■■□□□ 1.31
UFD1-202ENST00000399523 MS4A4AQ96JQ5 239 aa23.23■■□□□ 1.31
UFD1-202ENST00000399523 PRMT6Q96LA8 375 aaPredicted RBP23.22■■□□□ 1.31
UFD1-202ENST00000399523 IFT57Q9NWB7 429 aa23.22■■□□□ 1.31
UFD1-202ENST00000399523 PTCH2Q9Y6C5 1203 aa23.22■■□□□ 1.31
UFD1-202ENST00000399523 CLRN2A0PK11 232 aa23.21■■□□□ 1.31
UFD1-202ENST00000399523 PI4KAP2A4QPH2 592 aa23.21■■□□□ 1.31
UFD1-202ENST00000399523 H7C1W4 665 aa23.21■■□□□ 1.31
UFD1-202ENST00000399523 SLC4A8Q2Y0W8 1093 aa23.21■■□□□ 1.31
UFD1-202ENST00000399523 CFAP100Q494V2 611 aa23.21■■□□□ 1.31
UFD1-202ENST00000399523 CCDC30Q5VVM6 783 aa23.21■■□□□ 1.31
UFD1-202ENST00000399523 PI4KAP1Q8N8J0 262 aa23.21■■□□□ 1.31
UFD1-202ENST00000399523 C8orf58Q8NAV2 365 aa23.21■■□□□ 1.31
UFD1-202ENST00000399523 CHMP4AQ9BY43 222 aa23.21■■□□□ 1.31
UFD1-202ENST00000399523 IRS2Q9Y4H2 1338 aa23.21■■□□□ 1.31
UFD1-202ENST00000399523 GNAI1P63096 354 aa23.2■■□□□ 1.3
UFD1-202ENST00000399523 C15orf52Q6ZUT6 534 aaKnown RBP23.2■■□□□ 1.3
UFD1-202ENST00000399523 MPHOSPH8Q99549 860 aa23.2■■□□□ 1.3
UFD1-202ENST00000399523 PLA2G12BQ9BX93 195 aa23.2■■□□□ 1.3
UFD1-202ENST00000399523 ADAMTS8Q9UP79 889 aa23.2■■□□□ 1.3
UFD1-202ENST00000399523 AOX1Q06278 1338 aa23.19■■□□□ 1.3
UFD1-202ENST00000399523 NEURL1BA8MQ27 555 aa23.19■■□□□ 1.3
UFD1-202ENST00000399523 ITGA6P23229 1130 aa23.19■■□□□ 1.3
UFD1-202ENST00000399523 KCNJ4P48050 445 aa23.19■■□□□ 1.3
UFD1-202ENST00000399523 FKBP1AP62942 108 aaKnown RBP23.19■■□□□ 1.3
UFD1-202ENST00000399523 CHRNDQ07001 517 aa23.19■■□□□ 1.3
UFD1-202ENST00000399523 NEXNQ0ZGT2 675 aa23.19■■□□□ 1.3
UFD1-202ENST00000399523 RASA3Q14644 834 aa23.19■■□□□ 1.3
UFD1-202ENST00000399523 OPTNQ96CV9 577 aa23.19■■□□□ 1.3
UFD1-202ENST00000399523 VEZTQ9HBM0 779 aa23.19■■□□□ 1.3
UFD1-202ENST00000399523 OTOFQ9HC10 1997 aa23.19■■□□□ 1.3
UFD1-202ENST00000399523 WDR43Q15061 677 aaKnown RBP eCLIP23.18■■□□□ 1.3
UFD1-202ENST00000399523 CWF19L2Q2TBE0 894 aaKnown RBP23.18■■□□□ 1.3
UFD1-202ENST00000399523 UBE3BQ7Z3V4 1068 aa23.18■■□□□ 1.3
UFD1-202ENST00000399523 BRI3BPQ8WY22 251 aa23.18■■□□□ 1.3
UFD1-202ENST00000399523 ELP3Q9H9T3 547 aa23.18■■□□□ 1.3
UFD1-202ENST00000399523 ZFYVE28Q9HCC9 887 aa23.18■■□□□ 1.3
UFD1-202ENST00000399523 IL1R1P14778 569 aa23.17■■□□□ 1.3
UFD1-202ENST00000399523 TAF1CQ15572 869 aaPredicted RBP23.17■■□□□ 1.3
UFD1-202ENST00000399523 A0A0C4DFX4 3053 aa23.16■■□□□ 1.3
UFD1-202ENST00000399523 F8W031 263 aaPredicted RBP23.16■■□□□ 1.3
UFD1-202ENST00000399523 CSF1RP07333 972 aa23.16■■□□□ 1.3
UFD1-202ENST00000399523 MYBBP1AQ9BQG0 1328 aaKnown RBP23.15■■□□□ 1.3
UFD1-202ENST00000399523 SNAP23O00161 211 aa23.15■■□□□ 1.3
UFD1-202ENST00000399523 GTF2A2P52657 109 aa23.15■■□□□ 1.3
UFD1-202ENST00000399523 CALD1Q05682 793 aaKnown RBP23.15■■□□□ 1.3
UFD1-202ENST00000399523 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.15■■□□□ 1.3
UFD1-202ENST00000399523 TNFAIP1Q13829 316 aa23.14■■□□□ 1.29
UFD1-202ENST00000399523 CHRDL2Q6WN34 429 aa23.14■■□□□ 1.29
UFD1-202ENST00000399523 CNKSR2Q8WXI2 1034 aa23.14■■□□□ 1.29
UFD1-202ENST00000399523 CUL9Q8IWT3 2517 aa23.13■■□□□ 1.29
UFD1-202ENST00000399523 CCL15-CCL14A0A0B4J2E2 113 aa23.13■■□□□ 1.29
UFD1-202ENST00000399523 CASP7P55210 303 aa23.13■■□□□ 1.29
UFD1-202ENST00000399523 CCL15Q16663 113 aa23.13■■□□□ 1.29
UFD1-202ENST00000399523 ZNF804AQ7Z570 1209 aa23.13■■□□□ 1.29
UFD1-202ENST00000399523 FAM43AQ8N2R8 423 aa23.13■■□□□ 1.29
UFD1-202ENST00000399523 SH3TC2Q8TF17 1288 aa23.13■■□□□ 1.29
UFD1-202ENST00000399523 TEPSINQ96N21 525 aa23.13■■□□□ 1.29
UFD1-202ENST00000399523 TAF5LO75529 589 aa23.12■■□□□ 1.29
UFD1-202ENST00000399523 MYCP01106 439 aaPredicted RBP23.12■■□□□ 1.29
UFD1-202ENST00000399523 RBM5P52756 815 aaKnown RBP eCLIP23.12■■□□□ 1.29
UFD1-202ENST00000399523 GCKRQ14397 625 aa23.12■■□□□ 1.29
UFD1-202ENST00000399523 SPDYE2Q495Y8 402 aa23.12■■□□□ 1.29
UFD1-202ENST00000399523 TSPYL6Q8N831 410 aa23.12■■□□□ 1.29
UFD1-202ENST00000399523 RBM27Q9P2N5 1060 aaKnown RBP23.12■■□□□ 1.29
UFD1-202ENST00000399523 GNRH1P01148 92 aa23.11■■□□□ 1.29
UFD1-202ENST00000399523 VGLL4Q14135 290 aa23.11■■□□□ 1.29
UFD1-202ENST00000399523 ZNF70Q9UC06 446 aaPredicted RBP23.11■■□□□ 1.29
UFD1-202ENST00000399523 TLR2O60603 784 aa23.1■■□□□ 1.29
UFD1-202ENST00000399523 MAP3K9P80192 1104 aa23.1■■□□□ 1.29
UFD1-202ENST00000399523 LACTBP83111 547 aaPredicted RBP23.1■■□□□ 1.29
UFD1-202ENST00000399523 HELBQ8NG08 1087 aaPredicted RBP23.1■■□□□ 1.29
UFD1-202ENST00000399523 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.1■■□□□ 1.29
UFD1-202ENST00000399523 ARHGAP39Q9C0H5 1083 aa23.1■■□□□ 1.29
UFD1-202ENST00000399523 COL6A3P12111 3177 aa23.1■■□□□ 1.29
UFD1-202ENST00000399523 ANKRD18BA2A2Z9 1011 aa23.09■■□□□ 1.29
UFD1-202ENST00000399523 PRMT2P55345 433 aa23.09■■□□□ 1.29
UFD1-202ENST00000399523 KIF22Q14807 665 aa23.09■■□□□ 1.29
UFD1-202ENST00000399523 CDAN1Q8IWY9 1227 aa23.09■■□□□ 1.29
UFD1-202ENST00000399523 SHISA4Q96DD7 197 aa23.09■■□□□ 1.29
UFD1-202ENST00000399523 ZCCHC17Q9NP64 241 aaKnown RBP23.09■■□□□ 1.29
UFD1-202ENST00000399523 SERPINA10Q9UK55 444 aa23.09■■□□□ 1.29
UFD1-202ENST00000399523 JAG2Q9Y219 1238 aa23.09■■□□□ 1.29
UFD1-202ENST00000399523 A0A1B0GUL6 1792 aa23.09■■□□□ 1.29
UFD1-202ENST00000399523 ZSWIM8A7E2V4 1837 aa23.08■■□□□ 1.29
UFD1-202ENST00000399523 APAF1O14727 1248 aa23.08■■□□□ 1.29
UFD1-202ENST00000399523 WDHD1O75717 1129 aaPredicted RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms