RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 SPEF2Q9C093 1822 aa15.3■□□□□ 0.04
PRAME-201ENST00000398741 ADORA1P30542 326 aa15.3■□□□□ 0.04
PRAME-201ENST00000398741 SF3A1Q15459 793 aaKnown RBP15.3■□□□□ 0.04
PRAME-201ENST00000398741 RALYLQ86SE5 291 aaKnown RBP15.3■□□□□ 0.04
PRAME-201ENST00000398741 CEP57L1Q8IYX8 460 aa15.3■□□□□ 0.04
PRAME-201ENST00000398741 ENGASEQ8NFI3 743 aa15.3■□□□□ 0.04
PRAME-201ENST00000398741 MRFAP1L1Q96HT8 127 aa15.3■□□□□ 0.04
PRAME-201ENST00000398741 C16orf45Q96MC5 204 aaPredicted RBP15.3■□□□□ 0.04
PRAME-201ENST00000398741 PHLPP1O60346 1717 aa15.3■□□□□ 0.04
PRAME-201ENST00000398741 NUP188Q5SRE5 1749 aa15.3■□□□□ 0.04
PRAME-201ENST00000398741 LAMA4Q16363 1823 aa15.3■□□□□ 0.04
PRAME-201ENST00000398741 COL16A1Q07092 1604 aaPredicted RBP15.3■□□□□ 0.04
PRAME-201ENST00000398741 PRC1O43663 620 aa15.29■□□□□ 0.04
PRAME-201ENST00000398741 FDPSP14324 419 aaKnown RBP15.29■□□□□ 0.04
PRAME-201ENST00000398741 PIP4K2BP78356 416 aa15.29■□□□□ 0.04
PRAME-201ENST00000398741 ILDR1Q86SU0 546 aaPredicted RBP15.29■□□□□ 0.04
PRAME-201ENST00000398741 CACTINQ8WUQ7 758 aaKnown RBP15.29■□□□□ 0.04
PRAME-201ENST00000398741 C8orf76Q96K31 380 aa15.29■□□□□ 0.04
PRAME-201ENST00000398741 CCDC85AQ96PX6 553 aaPredicted RBP15.29■□□□□ 0.04
PRAME-201ENST00000398741 ISCA1Q9BUE6 129 aa15.29■□□□□ 0.04
PRAME-201ENST00000398741 NAT10Q9H0A0 1025 aaKnown RBP15.29■□□□□ 0.04
PRAME-201ENST00000398741 RTEL1Q9NZ71 1219 aa15.29■□□□□ 0.04
PRAME-201ENST00000398741 KCPQ6ZWJ8 1503 aa15.29■□□□□ 0.04
PRAME-201ENST00000398741 KLF18A0A0U1RQI7 1052 aa15.29■□□□□ 0.04
PRAME-201ENST00000398741 GOLGA8BA8MQT2 603 aa15.29■□□□□ 0.04
PRAME-201ENST00000398741 EVCP57679 992 aa15.29■□□□□ 0.04
PRAME-201ENST00000398741 TCIRG1Q13488 830 aa15.29■□□□□ 0.04
PRAME-201ENST00000398741 STK38Q15208 465 aa15.29■□□□□ 0.04
PRAME-201ENST00000398741 ZRSR1Q15695 479 aaKnown RBP15.29■□□□□ 0.04
PRAME-201ENST00000398741 CCDC144BQ3MJ40 725 aa15.29■□□□□ 0.04
PRAME-201ENST00000398741 CCDC144CPQ8IYA2 1237 aa15.29■□□□□ 0.04
PRAME-201ENST00000398741 SDF4Q9BRK5 362 aa15.29■□□□□ 0.04
PRAME-201ENST00000398741 GPHNQ9NQX3 736 aaPredicted RBP15.29■□□□□ 0.04
PRAME-201ENST00000398741 PCDHA7Q9UN72 937 aa15.29■□□□□ 0.04
PRAME-201ENST00000398741 COL22A1Q8NFW1 1626 aaPredicted RBP15.29■□□□□ 0.04
PRAME-201ENST00000398741 CPLX1O14810 134 aa15.28■□□□□ 0.04
PRAME-201ENST00000398741 FGAP02671 866 aa15.28■□□□□ 0.04
PRAME-201ENST00000398741 IL2RBP14784 551 aa15.28■□□□□ 0.04
PRAME-201ENST00000398741 TPD52L1Q16890 204 aaPredicted RBP15.28■□□□□ 0.04
PRAME-201ENST00000398741 NCOA7Q8NI08 942 aa15.28■□□□□ 0.04
PRAME-201ENST00000398741 CERKQ8TCT0 537 aa15.28■□□□□ 0.04
PRAME-201ENST00000398741 APPBP2Q92624 585 aa15.28■□□□□ 0.04
PRAME-201ENST00000398741 UBAP1LF5GYI3 381 aa15.28■□□□□ 0.04
PRAME-201ENST00000398741 NEMFO60524 1076 aa15.28■□□□□ 0.04
PRAME-201ENST00000398741 TOM1O60784 492 aa15.28■□□□□ 0.04
PRAME-201ENST00000398741 TNNT1P13805 278 aa15.28■□□□□ 0.04
PRAME-201ENST00000398741 NKX1-1Q15270 411 aaPredicted RBP15.28■□□□□ 0.04
PRAME-201ENST00000398741 ADALQ6DHV7 355 aa15.28■□□□□ 0.04
PRAME-201ENST00000398741 KIF6Q6ZMV9 814 aa15.28■□□□□ 0.04
PRAME-201ENST00000398741 A0A1W2PQ27 194 aa15.27■□□□□ 0.04
PRAME-201ENST00000398741 A0A1W2PQ64 194 aa15.27■□□□□ 0.04
PRAME-201ENST00000398741 A0A1W2PQD8 194 aa15.27■□□□□ 0.04
PRAME-201ENST00000398741 ZNF213O14771 459 aa15.27■□□□□ 0.04
PRAME-201ENST00000398741 ZAP70P43403 619 aa15.27■□□□□ 0.04
PRAME-201ENST00000398741 IFIT5Q13325 482 aaKnown RBP15.27■□□□□ 0.04
PRAME-201ENST00000398741 HSP90AB3PQ58FF7 597 aa15.27■□□□□ 0.04
PRAME-201ENST00000398741 OTUD7BQ6GQQ9 843 aa15.27■□□□□ 0.04
PRAME-201ENST00000398741 DHX40Q8IX18 779 aaKnown RBP15.27■□□□□ 0.04
PRAME-201ENST00000398741 MB21D2Q8IYB1 491 aaPredicted RBP15.27■□□□□ 0.04
PRAME-201ENST00000398741 KCNG4Q8TDN1 519 aa15.27■□□□□ 0.04
PRAME-201ENST00000398741 ORC3Q9UBD5 711 aaPredicted RBP15.27■□□□□ 0.04
PRAME-201ENST00000398741 A0A1B0GVL5 298 aa15.27■□□□□ 0.03
PRAME-201ENST00000398741 POLR3DP05423 398 aaPredicted RBP15.27■□□□□ 0.03
PRAME-201ENST00000398741 LRRC8AQ8IWT6 810 aa15.27■□□□□ 0.03
PRAME-201ENST00000398741 FMR1NBQ8N0W7 255 aaPredicted RBP15.27■□□□□ 0.03
PRAME-201ENST00000398741 AOPEPQ8N6M6 819 aa15.27■□□□□ 0.03
PRAME-201ENST00000398741 LINC00301Q8NCQ3 95 aa15.27■□□□□ 0.03
PRAME-201ENST00000398741 FBXW7Q969H0 707 aa15.27■□□□□ 0.03
PRAME-201ENST00000398741 FAM89AQ96GI7 184 aa15.27■□□□□ 0.03
PRAME-201ENST00000398741 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.27■□□□□ 0.031e-17■□□□□ 9.1
PRAME-201ENST00000398741 ABCC12Q96J65 1359 aa15.26■□□□□ 0.03
PRAME-201ENST00000398741 A0A087WWV3 80 aa15.26■□□□□ 0.03
PRAME-201ENST00000398741 SMTNL1A8MU46 457 aa15.26■□□□□ 0.03
PRAME-201ENST00000398741 FOXP2O15409 715 aa15.26■□□□□ 0.03
PRAME-201ENST00000398741 PCCAP05165 728 aaPredicted RBP15.26■□□□□ 0.03
PRAME-201ENST00000398741 SCARF1Q14162 830 aa15.26■□□□□ 0.03
PRAME-201ENST00000398741 SYNE3Q6ZMZ3 975 aa15.26■□□□□ 0.03
PRAME-201ENST00000398741 BRAPQ7Z569 592 aa15.26■□□□□ 0.03
PRAME-201ENST00000398741 PUS7LQ9H0K6 701 aaKnown RBP15.26■□□□□ 0.03
PRAME-201ENST00000398741 UBR2Q8IWV8 1755 aa15.26■□□□□ 0.03
PRAME-201ENST00000398741 GPAA1O43292 621 aa15.25■□□□□ 0.03
PRAME-201ENST00000398741 CTIFO43310 598 aaKnown RBP15.25■□□□□ 0.03
PRAME-201ENST00000398741 YEATS4O95619 227 aa15.25■□□□□ 0.03
PRAME-201ENST00000398741 METTL24Q5JXM2 366 aa15.25■□□□□ 0.03
PRAME-201ENST00000398741 PDCL2Q8N4E4 241 aa15.25■□□□□ 0.03
PRAME-201ENST00000398741 FBXO18Q8NFZ0 1043 aa15.25■□□□□ 0.03
PRAME-201ENST00000398741 ERCC4Q92889 916 aaPredicted RBP15.25■□□□□ 0.03
PRAME-201ENST00000398741 POLR3EQ9NVU0 708 aa15.25■□□□□ 0.03
PRAME-201ENST00000398741 TMOD3Q9NYL9 352 aa15.25■□□□□ 0.03
PRAME-201ENST00000398741 CLIC4Q9Y696 253 aa15.25■□□□□ 0.03
PRAME-201ENST00000398741 MYH15Q9Y2K3 1946 aa15.25■□□□□ 0.03
PRAME-201ENST00000398741 TNS2Q63HR2 1409 aa15.25■□□□□ 0.03
PRAME-201ENST00000398741 SPTLC2O15270 562 aa15.25■□□□□ 0.03
PRAME-201ENST00000398741 NDUFA8P51970 172 aa15.25■□□□□ 0.03
PRAME-201ENST00000398741 TRDNQ13061 729 aa15.25■□□□□ 0.03
PRAME-201ENST00000398741 TRIM28Q13263 835 aaKnown RBP15.25■□□□□ 0.03
PRAME-201ENST00000398741 ATP2B3Q16720 1220 aa15.25■□□□□ 0.03
PRAME-201ENST00000398741 FILIP1Q7Z7B0 1213 aa15.25■□□□□ 0.03
PRAME-201ENST00000398741 RAB11FIP4Q86YS3 637 aa15.25■□□□□ 0.03
PRAME-201ENST00000398741 PAXBP1Q9Y5B6 917 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms