RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 FILIP1Q7Z7B0 1213 aa18.59■□□□□ 0.57
CHMP1A-201ENST00000397901 TXLNBQ8N3L3 684 aa18.59■□□□□ 0.57
CHMP1A-201ENST00000397901 RASSF4Q9H2L5 321 aa18.59■□□□□ 0.57
CHMP1A-201ENST00000397901 A0A087WZG4 1122 aa18.59■□□□□ 0.57
CHMP1A-201ENST00000397901 KINO60870 393 aaKnown RBP18.59■□□□□ 0.57
CHMP1A-201ENST00000397901 H2AFXP16104 143 aaPredicted RBP18.59■□□□□ 0.57
CHMP1A-201ENST00000397901 NAA16Q6N069 864 aaPredicted RBP18.59■□□□□ 0.57
CHMP1A-201ENST00000397901 NEUROD6Q96NK8 337 aa18.59■□□□□ 0.57
CHMP1A-201ENST00000397901 LLPHQ9BRT6 129 aaKnown RBP18.59■□□□□ 0.57
CHMP1A-201ENST00000397901 ME1P48163 572 aa18.58■□□□□ 0.57
CHMP1A-201ENST00000397901 SNW1Q13573 536 aaKnown RBP18.58■□□□□ 0.57
CHMP1A-201ENST00000397901 SARM1Q6SZW1 724 aa18.58■□□□□ 0.57
CHMP1A-201ENST00000397901 KBTBD3Q8NAB2 608 aa18.58■□□□□ 0.57
CHMP1A-201ENST00000397901 CTAGE5O15320 804 aa18.58■□□□□ 0.56
CHMP1A-201ENST00000397901 FSIP1Q8NA03 581 aa18.58■□□□□ 0.56
CHMP1A-201ENST00000397901 FHOD1Q9Y613 1164 aa18.58■□□□□ 0.56
CHMP1A-201ENST00000397901 PARP4Q9UKK3 1724 aaKnown RBP18.57■□□□□ 0.56
CHMP1A-201ENST00000397901 RFX7Q2KHR2 1363 aa18.57■□□□□ 0.56
CHMP1A-201ENST00000397901 DHX40Q8IX18 779 aaKnown RBP18.57■□□□□ 0.56
CHMP1A-201ENST00000397901 MRFAP1L1Q96HT8 127 aa18.57■□□□□ 0.56
CHMP1A-201ENST00000397901 SKILP12757 684 aa18.57■□□□□ 0.56
CHMP1A-201ENST00000397901 RABL6Q3YEC7 729 aaPredicted RBP18.57■□□□□ 0.56
CHMP1A-201ENST00000397901 LMBR1LQ6UX01 489 aa18.57■□□□□ 0.56
CHMP1A-201ENST00000397901 RSPH14Q9UHP6 348 aa18.57■□□□□ 0.56
CHMP1A-201ENST00000397901 KIF2AO00139 706 aaPredicted RBP18.56■□□□□ 0.56
CHMP1A-201ENST00000397901 HMGB1P09429 215 aaKnown RBP18.56■□□□□ 0.56
CHMP1A-201ENST00000397901 GEMIN8Q9NWZ8 242 aaKnown RBP18.56■□□□□ 0.56
CHMP1A-201ENST00000397901 TRMT1Q9NXH9 659 aaKnown RBP18.56■□□□□ 0.56
CHMP1A-201ENST00000397901 SOS2Q07890 1332 aaPredicted RBP18.56■□□□□ 0.56
CHMP1A-201ENST00000397901 SH3TC1Q8TE82 1336 aa18.56■□□□□ 0.56
CHMP1A-201ENST00000397901 CCDC69A6NI79 296 aa18.56■□□□□ 0.56
CHMP1A-201ENST00000397901 TPM4P67936 248 aa18.56■□□□□ 0.56
CHMP1A-201ENST00000397901 CTR9Q6PD62 1173 aa18.56■□□□□ 0.56
CHMP1A-201ENST00000397901 LRP10Q7Z4F1 713 aa18.56■□□□□ 0.56
CHMP1A-201ENST00000397901 AOPEPQ8N6M6 819 aa18.56■□□□□ 0.56
CHMP1A-201ENST00000397901 ZNF396Q96N95 335 aaPredicted RBP18.56■□□□□ 0.56
CHMP1A-201ENST00000397901 FAM160A1Q05DH4 1040 aa18.55■□□□□ 0.56
CHMP1A-201ENST00000397901 ILDR1Q86SU0 546 aaPredicted RBP18.55■□□□□ 0.56
CHMP1A-201ENST00000397901 ANO10Q9NW15 660 aa18.55■□□□□ 0.56
CHMP1A-201ENST00000397901 PAG1Q9NWQ8 432 aa18.55■□□□□ 0.56
CHMP1A-201ENST00000397901 GLI3P10071 1580 aa18.55■□□□□ 0.56
CHMP1A-201ENST00000397901 E7EWF7 191 aa18.55■□□□□ 0.56
CHMP1A-201ENST00000397901 TIMM10P62072 90 aa18.55■□□□□ 0.56
CHMP1A-201ENST00000397901 TTC5Q8N0Z6 440 aa18.55■□□□□ 0.56
CHMP1A-201ENST00000397901 ENGASEQ8NFI3 743 aa18.55■□□□□ 0.56
CHMP1A-201ENST00000397901 PNMA6AP0CW24 399 aaPredicted RBP18.54■□□□□ 0.56
CHMP1A-201ENST00000397901 PLA2G4AP47712 749 aa18.54■□□□□ 0.56
CHMP1A-201ENST00000397901 EXOSC10Q01780 885 aaKnown RBP18.54■□□□□ 0.56
CHMP1A-201ENST00000397901 SNRPA1P09661 255 aaKnown RBP18.54■□□□□ 0.56
CHMP1A-201ENST00000397901 NOP2P46087 812 aaKnown RBP18.54■□□□□ 0.56
CHMP1A-201ENST00000397901 SLAIN2Q9P270 581 aa18.54■□□□□ 0.56
CHMP1A-201ENST00000397901 LAMA4Q16363 1823 aa18.53■□□□□ 0.56
CHMP1A-201ENST00000397901 WDR17Q8IZU2 1322 aa18.53■□□□□ 0.56
CHMP1A-201ENST00000397901 PDIA3P30101 505 aaKnown RBP18.53■□□□□ 0.56
CHMP1A-201ENST00000397901 OTUD7BQ6GQQ9 843 aa18.53■□□□□ 0.56
CHMP1A-201ENST00000397901 CEP57L1Q8IYX8 460 aa18.53■□□□□ 0.56
CHMP1A-201ENST00000397901 KCND1Q9NSA2 647 aa18.53■□□□□ 0.56
CHMP1A-201ENST00000397901 A0A1B0GVL5 298 aa18.52■□□□□ 0.56
CHMP1A-201ENST00000397901 HSPD1P10809 573 aaKnown RBP18.52■□□□□ 0.56
CHMP1A-201ENST00000397901 CLCN6P51797 869 aa18.52■□□□□ 0.56
CHMP1A-201ENST00000397901 CCZ1BP86790 482 aa18.52■□□□□ 0.56
CHMP1A-201ENST00000397901 CCZ1P86791 482 aaPredicted RBP18.52■□□□□ 0.56
CHMP1A-201ENST00000397901 TTLL5Q6EMB2 1281 aa18.52■□□□□ 0.56
CHMP1A-201ENST00000397901 GPHNQ9NQX3 736 aaPredicted RBP18.52■□□□□ 0.56
CHMP1A-201ENST00000397901 HELLSQ9NRZ9 838 aa18.52■□□□□ 0.56
CHMP1A-201ENST00000397901 ABCA3Q99758 1704 aa18.52■□□□□ 0.56
CHMP1A-201ENST00000397901 AFDNP55196 1824 aaKnown RBP18.52■□□□□ 0.56
CHMP1A-201ENST00000397901 ZNF335Q9H4Z2 1342 aaPredicted RBP18.52■□□□□ 0.56
CHMP1A-201ENST00000397901 SALL1Q9NSC2 1324 aa18.52■□□□□ 0.56
CHMP1A-201ENST00000397901 FMNL2Q96PY5 1086 aa18.52■□□□□ 0.56
CHMP1A-201ENST00000397901 SDF4Q9BRK5 362 aa18.52■□□□□ 0.56
CHMP1A-201ENST00000397901 DSCC1Q9BVC3 393 aa18.52■□□□□ 0.56
CHMP1A-201ENST00000397901 PRDM11Q9NQV5 511 aa18.52■□□□□ 0.56
CHMP1A-201ENST00000397901 PCDHA7Q9UN72 937 aa18.52■□□□□ 0.56
CHMP1A-201ENST00000397901 MYH15Q9Y2K3 1946 aa18.52■□□□□ 0.55
CHMP1A-201ENST00000397901 COL5A2P05997 1499 aaPredicted RBP18.52■□□□□ 0.55
CHMP1A-201ENST00000397901 CARMIL3Q8ND23 1372 aa18.52■□□□□ 0.55
CHMP1A-201ENST00000397901 CASP7P55210 303 aa18.51■□□□□ 0.55
CHMP1A-201ENST00000397901 NEK11Q8NG66 645 aa18.51■□□□□ 0.55
CHMP1A-201ENST00000397901 PALLDQ8WX93 1383 aa18.51■□□□□ 0.55
CHMP1A-201ENST00000397901 CABP4P57796 275 aa18.51■□□□□ 0.55
CHMP1A-201ENST00000397901 ZMYM1Q5SVZ6 1142 aa18.51■□□□□ 0.55
CHMP1A-201ENST00000397901 SYT10Q6XYQ8 523 aa18.51■□□□□ 0.55
CHMP1A-201ENST00000397901 KRBA2Q6ZNG9 492 aa18.51■□□□□ 0.55
CHMP1A-201ENST00000397901 MRPS27Q92552 414 aaKnown RBP18.51■□□□□ 0.55
CHMP1A-201ENST00000397901 AGXT2Q9BYV1 514 aa18.51■□□□□ 0.55
CHMP1A-201ENST00000397901 LAMB4A4D0S4 1761 aa18.51■□□□□ 0.55
CHMP1A-201ENST00000397901 MAST3O60307 1309 aa18.5■□□□□ 0.55
CHMP1A-201ENST00000397901 KDM4FA0A1W2PPD8 638 aa18.5■□□□□ 0.55
CHMP1A-201ENST00000397901 GPS2Q13227 327 aa18.5■□□□□ 0.55
CHMP1A-201ENST00000397901 ATG9AQ7Z3C6 839 aa18.5■□□□□ 0.55
CHMP1A-201ENST00000397901 CCAR2Q8N163 923 aaKnown RBP18.5■□□□□ 0.55
CHMP1A-201ENST00000397901 L2HGDHQ9H9P8 463 aa18.5■□□□□ 0.55
CHMP1A-201ENST00000397901 NPHP1O15259 732 aa18.5■□□□□ 0.55
CHMP1A-201ENST00000397901 DHX16O60231 1041 aaKnown RBP18.5■□□□□ 0.55
CHMP1A-201ENST00000397901 FDPSP14324 419 aaKnown RBP18.5■□□□□ 0.55
CHMP1A-201ENST00000397901 ERCC6LQ2NKX8 1250 aa18.5■□□□□ 0.55
CHMP1A-201ENST00000397901 CWC15Q9P013 229 aaKnown RBP18.5■□□□□ 0.55
CHMP1A-201ENST00000397901 POLR3DP05423 398 aaPredicted RBP18.49■□□□□ 0.55
CHMP1A-201ENST00000397901 NDUFA8P51970 172 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms