RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 USPL1Q5W0Q7 1092 aa8.35□□□□□ -1.07
SMCO1-201ENST00000397537 NXNQ6DKJ4 435 aa8.35□□□□□ -1.07
SMCO1-201ENST00000397537 PACS2Q86VP3 889 aa8.35□□□□□ -1.07
SMCO1-201ENST00000397537 SMAP1Q8IYB5 467 aaPredicted RBP8.35□□□□□ -1.07
SMCO1-201ENST00000397537 SYNPOQ8N3V7 929 aa8.35□□□□□ -1.07
SMCO1-201ENST00000397537 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.35□□□□□ -1.07
SMCO1-201ENST00000397537 CLIC5Q9NZA1 410 aa8.35□□□□□ -1.07
SMCO1-201ENST00000397537 CUX1P39880 1505 aa8.35□□□□□ -1.07
SMCO1-201ENST00000397537 PRRT4C9JH25 899 aa8.34□□□□□ -1.07
SMCO1-201ENST00000397537 PIP5K1CO60331 668 aa8.34□□□□□ -1.07
SMCO1-201ENST00000397537 TRIM37O94972 964 aa8.34□□□□□ -1.07
SMCO1-201ENST00000397537 PDGFAP04085 211 aa8.34□□□□□ -1.07
SMCO1-201ENST00000397537 APOBRQ0VD83 1088 aa8.34□□□□□ -1.07
SMCO1-201ENST00000397537 MTERF2Q49AM1 385 aa8.34□□□□□ -1.07
SMCO1-201ENST00000397537 FAM102BQ5T8I3 360 aa8.34□□□□□ -1.07
SMCO1-201ENST00000397537 ANO1Q5XXA6 986 aa8.34□□□□□ -1.07
SMCO1-201ENST00000397537 NIM1KQ8IY84 436 aa8.34□□□□□ -1.07
SMCO1-201ENST00000397537 TNS4Q8IZW8 715 aa8.34□□□□□ -1.07
SMCO1-201ENST00000397537 CPXCR1Q8N123 301 aa8.34□□□□□ -1.07
SMCO1-201ENST00000397537 ABTB2Q8N961 1025 aa8.34□□□□□ -1.07
SMCO1-201ENST00000397537 ANKRD42Q8N9B4 389 aa8.34□□□□□ -1.07
SMCO1-201ENST00000397537 NBPF3Q9H094 633 aa8.34□□□□□ -1.07
SMCO1-201ENST00000397537 FAM8A1Q9UBU6 413 aa8.34□□□□□ -1.07
SMCO1-201ENST00000397537 POLG2Q9UHN1 485 aa8.34□□□□□ -1.07
SMCO1-201ENST00000397537 NOL7Q9UMY1 257 aaKnown RBP8.34□□□□□ -1.07
SMCO1-201ENST00000397537 ABCA10Q8WWZ4 1543 aa8.34□□□□□ -1.07
SMCO1-201ENST00000397537 FHAD1B1AJZ9 1412 aa8.34□□□□□ -1.07
SMCO1-201ENST00000397537 KDM2BQ8NHM5 1336 aa8.34□□□□□ -1.07
SMCO1-201ENST00000397537 PDE8AO60658 829 aa8.33□□□□□ -1.08
SMCO1-201ENST00000397537 IRS1P35568 1242 aa8.33□□□□□ -1.08
SMCO1-201ENST00000397537 GEMIN4P57678 1058 aaKnown RBP8.33□□□□□ -1.08
SMCO1-201ENST00000397537 SEPT6Q14141 434 aa8.33□□□□□ -1.08
SMCO1-201ENST00000397537 AFAP1L2Q8N4X5 818 aa8.33□□□□□ -1.08
SMCO1-201ENST00000397537 MAGEB6Q8N7X4 407 aa8.33□□□□□ -1.08
SMCO1-201ENST00000397537 EDEM1Q92611 657 aa8.33□□□□□ -1.08
SMCO1-201ENST00000397537 NINJ1Q92982 152 aa8.33□□□□□ -1.08
SMCO1-201ENST00000397537 TSPAN10Q9H1Z9 355 aaPredicted RBP8.33□□□□□ -1.08
SMCO1-201ENST00000397537 PFDN2Q9UHV9 154 aa8.33□□□□□ -1.08
SMCO1-201ENST00000397537 ASAP1Q9ULH1 1129 aa8.33□□□□□ -1.08
SMCO1-201ENST00000397537 TMEM229AB2RXF0 380 aa8.33□□□□□ -1.08
SMCO1-201ENST00000397537 EPB42P16452 691 aa8.33□□□□□ -1.08
SMCO1-201ENST00000397537 EIF4A3P38919 411 aaKnown RBP8.33□□□□□ -1.08
SMCO1-201ENST00000397537 HTR3AP46098 478 aa8.33□□□□□ -1.08
SMCO1-201ENST00000397537 PURAQ00577 322 aaKnown RBP8.33□□□□□ -1.08
SMCO1-201ENST00000397537 PUS10Q3MIT2 529 aaKnown RBP8.33□□□□□ -1.08
SMCO1-201ENST00000397537 TNNI3KQ59H18 835 aa8.33□□□□□ -1.08
SMCO1-201ENST00000397537 PCNX4Q63HM2 1172 aa8.33□□□□□ -1.08
SMCO1-201ENST00000397537 SPATC1Q76KD6 591 aa8.33□□□□□ -1.08
SMCO1-201ENST00000397537 MORC1Q86VD1 984 aa8.33□□□□□ -1.08
SMCO1-201ENST00000397537 EPS8L3Q8TE67 593 aaKnown RBP8.33□□□□□ -1.08
SMCO1-201ENST00000397537 SMAD5Q99717 465 aaKnown RBP8.33□□□□□ -1.08
SMCO1-201ENST00000397537 RSRP1Q9BUV0 290 aa8.33□□□□□ -1.08
SMCO1-201ENST00000397537 SRRTQ9BXP5 876 aaKnown RBP8.33□□□□□ -1.08
SMCO1-201ENST00000397537 PUF60Q9UHX1 559 aaKnown RBP8.33□□□□□ -1.08
SMCO1-201ENST00000397537 MINDY4BA8MYZ0 360 aa8.32□□□□□ -1.08
SMCO1-201ENST00000397537 GIPC1O14908 333 aa8.32□□□□□ -1.08
SMCO1-201ENST00000397537 TRIM27P14373 513 aa8.32□□□□□ -1.08
SMCO1-201ENST00000397537 SERPINB3P29508 390 aa8.32□□□□□ -1.08
SMCO1-201ENST00000397537 DEKP35659 375 aaKnown RBP8.32□□□□□ -1.08
SMCO1-201ENST00000397537 SOX5P35711 763 aa8.32□□□□□ -1.08
SMCO1-201ENST00000397537 GPSM2P81274 684 aa8.32□□□□□ -1.08
SMCO1-201ENST00000397537 MTMR1Q13613 665 aa8.32□□□□□ -1.08
SMCO1-201ENST00000397537 COL9A2Q14055 689 aaPredicted RBP8.32□□□□□ -1.08
SMCO1-201ENST00000397537 ALDH1L2Q3SY69 923 aa8.32□□□□□ -1.08
SMCO1-201ENST00000397537 AKAP4Q5JQC9 854 aa8.32□□□□□ -1.08
SMCO1-201ENST00000397537 CCDC81Q6ZN84 652 aa8.32□□□□□ -1.08
SMCO1-201ENST00000397537 DZIP3Q86Y13 1208 aaKnown RBP8.32□□□□□ -1.08
SMCO1-201ENST00000397537 ATL2Q8NHH9 583 aa8.32□□□□□ -1.08
SMCO1-201ENST00000397537 IPO4Q8TEX9 1081 aaKnown RBP8.32□□□□□ -1.08
SMCO1-201ENST00000397537 ZNF296Q8WUU4 475 aaPredicted RBP8.32□□□□□ -1.08
SMCO1-201ENST00000397537 GPKOWQ92917 476 aaPredicted RBP eCLIP8.32□□□□□ -1.08
SMCO1-201ENST00000397537 NUDT16Q96DE0 195 aaKnown RBP8.32□□□□□ -1.08
SMCO1-201ENST00000397537 HOOK2Q96ED9 719 aa8.32□□□□□ -1.08
SMCO1-201ENST00000397537 ARHGAP9Q9BRR9 750 aa8.32□□□□□ -1.08
SMCO1-201ENST00000397537 GTF2A1LQ9UNN4 478 aa8.32□□□□□ -1.08
SMCO1-201ENST00000397537 SLC27A5Q9Y2P5 690 aa8.32□□□□□ -1.08
SMCO1-201ENST00000397537 GOLGA6CA6NDK9 693 aa8.31□□□□□ -1.08
SMCO1-201ENST00000397537 GOLGA6BA6NDN3 693 aa8.31□□□□□ -1.08
SMCO1-201ENST00000397537 CFHP08603 1231 aa8.31□□□□□ -1.08
SMCO1-201ENST00000397537 GOLGA6DP0CG33 693 aa8.31□□□□□ -1.08
SMCO1-201ENST00000397537 GFOD2Q3B7J2 385 aa8.31□□□□□ -1.08
SMCO1-201ENST00000397537 ARMCX6Q7L4S7 300 aa8.31□□□□□ -1.08
SMCO1-201ENST00000397537 KHSRPQ92945 711 aaKnown RBP eCLIP8.31□□□□□ -1.08
SMCO1-201ENST00000397537 TIFAQ96CG3 184 aa8.31□□□□□ -1.08
SMCO1-201ENST00000397537 TRMT2BQ96GJ1 504 aaKnown RBP8.31□□□□□ -1.08
SMCO1-201ENST00000397537 GOLGA6AQ9NYA3 693 aa8.31□□□□□ -1.08
SMCO1-201ENST00000397537 USP25Q9UHP3 1055 aa8.31□□□□□ -1.08
SMCO1-201ENST00000397537 HDAC9Q9UKV0 1011 aa8.31□□□□□ -1.08
SMCO1-201ENST00000397537 EPRSP07814 1512 aaKnown RBP8.31□□□□□ -1.08
SMCO1-201ENST00000397537 KIAA0586Q9BVV6 1533 aa8.31□□□□□ -1.08
SMCO1-201ENST00000397537 HALP42357 657 aa8.31□□□□□ -1.08
SMCO1-201ENST00000397537 SARSP49591 514 aaKnown RBP8.31□□□□□ -1.08
SMCO1-201ENST00000397537 PPM1FP49593 454 aaPredicted RBP8.31□□□□□ -1.08
SMCO1-201ENST00000397537 TOMM20Q15388 145 aa8.31□□□□□ -1.08
SMCO1-201ENST00000397537 MORN1Q5T089 497 aa8.31□□□□□ -1.08
SMCO1-201ENST00000397537 PDXDC1Q6P996 788 aa8.31□□□□□ -1.08
SMCO1-201ENST00000397537 POTEEQ6S8J3 1075 aa8.31□□□□□ -1.08
SMCO1-201ENST00000397537 NOC4LQ9BVI4 516 aaKnown RBP8.31□□□□□ -1.08
SMCO1-201ENST00000397537 NT5C1AQ9BXI3 368 aa8.31□□□□□ -1.08
SMCO1-201ENST00000397537 C9orf78Q9NZ63 289 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms