RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 IL1R1P14778 569 aa22.88■■□□□ 1.25
TSPAN4-204ENST00000397404 RTKN2Q8IZC4 609 aa22.88■■□□□ 1.25
TSPAN4-204ENST00000397404 TDRD7Q8NHU6 1098 aaKnown RBP22.88■■□□□ 1.25
TSPAN4-204ENST00000397404 EDC3Q96F86 508 aaKnown RBP22.88■■□□□ 1.25
TSPAN4-204ENST00000397404 SGIP1Q9BQI5 828 aa22.88■■□□□ 1.25
TSPAN4-204ENST00000397404 ZC3H12CQ9C0D7 883 aaKnown RBP22.88■■□□□ 1.25
TSPAN4-204ENST00000397404 COA1Q9GZY4 146 aa22.88■■□□□ 1.25
TSPAN4-204ENST00000397404 MYH13Q9UKX3 1938 aa22.87■■□□□ 1.25
TSPAN4-204ENST00000397404 C6orf229H3BNL8 230 aa22.87■■□□□ 1.25
TSPAN4-204ENST00000397404 C7orf43Q8WVR3 580 aa22.87■■□□□ 1.25
TSPAN4-204ENST00000397404 IL17RAQ96F46 866 aa22.87■■□□□ 1.25
TSPAN4-204ENST00000397404 ADD2P35612 726 aa22.86■■□□□ 1.25
TSPAN4-204ENST00000397404 TBC1D22AQ8WUA7 517 aa22.86■■□□□ 1.25
TSPAN4-204ENST00000397404 ANTXR1Q9H6X2 564 aa22.86■■□□□ 1.25
TSPAN4-204ENST00000397404 POLLQ9UGP5 575 aa22.86■■□□□ 1.25
TSPAN4-204ENST00000397404 CCDC171Q6TFL3 1326 aa22.86■■□□□ 1.25
TSPAN4-204ENST00000397404 CHRNA5P30532 468 aa22.85■■□□□ 1.25
TSPAN4-204ENST00000397404 SLC9C2Q5TAH2 1124 aa22.85■■□□□ 1.25
TSPAN4-204ENST00000397404 LSG1Q9H089 658 aaKnown RBP22.85■■□□□ 1.25
TSPAN4-204ENST00000397404 PIM2Q9P1W9 311 aa22.85■■□□□ 1.25
TSPAN4-204ENST00000397404 LRP2BPQ9P2M1 347 aa22.85■■□□□ 1.25
TSPAN4-204ENST00000397404 ATF5Q9Y2D1 282 aaPredicted RBP22.85■■□□□ 1.25
TSPAN4-204ENST00000397404 A0A0D9SFI3 127 aa22.85■■□□□ 1.25
TSPAN4-204ENST00000397404 IDH1O75874 414 aaKnown RBP22.85■■□□□ 1.25
TSPAN4-204ENST00000397404 CCDC93Q567U6 631 aa22.85■■□□□ 1.25
TSPAN4-204ENST00000397404 RNF20Q5VTR2 975 aa22.85■■□□□ 1.25
TSPAN4-204ENST00000397404 FAM227BQ96M60 508 aa22.85■■□□□ 1.25
TSPAN4-204ENST00000397404 SUGT1Q9Y2Z0 365 aa22.85■■□□□ 1.25
TSPAN4-204ENST00000397404 NDUFB9Q9Y6M9 179 aa22.85■■□□□ 1.25
TSPAN4-204ENST00000397404 PI16Q6UXB8 463 aa22.84■■□□□ 1.25
TSPAN4-204ENST00000397404 CERS3Q8IU89 383 aa22.84■■□□□ 1.25
TSPAN4-204ENST00000397404 MAP4K1Q92918 833 aa22.84■■□□□ 1.25
TSPAN4-204ENST00000397404 DSCC1Q9BVC3 393 aa22.84■■□□□ 1.25
TSPAN4-204ENST00000397404 SPON1Q9HCB6 807 aa22.84■■□□□ 1.25
TSPAN4-204ENST00000397404 CD209Q9NNX6 404 aa22.84■■□□□ 1.25
TSPAN4-204ENST00000397404 SLX4Q8IY92 1834 aa22.83■■□□□ 1.25
TSPAN4-204ENST00000397404 PODNQ7Z5L7 613 aa22.83■■□□□ 1.25
TSPAN4-204ENST00000397404 PSMD1Q99460 953 aa22.83■■□□□ 1.25
TSPAN4-204ENST00000397404 PIH1D3Q9NQM4 214 aaKnown RBP22.83■■□□□ 1.25
TSPAN4-204ENST00000397404 DPEP1P16444 411 aa22.82■■□□□ 1.24
TSPAN4-204ENST00000397404 PDE6AP16499 860 aa22.82■■□□□ 1.24
TSPAN4-204ENST00000397404 HSPA4P34932 840 aa22.82■■□□□ 1.24
TSPAN4-204ENST00000397404 RABEP1Q15276 862 aa22.82■■□□□ 1.24
TSPAN4-204ENST00000397404 ERICH6Q7L0X2 663 aa22.82■■□□□ 1.24
TSPAN4-204ENST00000397404 U3KPZ7 1027 aaPredicted RBP22.82■■□□□ 1.24
TSPAN4-204ENST00000397404 RPAP1Q9BWH6 1393 aaPredicted RBP22.82■■□□□ 1.24
TSPAN4-204ENST00000397404 FAM205AQ6ZU69 1335 aa22.82■■□□□ 1.24
TSPAN4-204ENST00000397404 GNAT2P19087 354 aa22.81■■□□□ 1.24
TSPAN4-204ENST00000397404 KCNA3P22001 575 aa22.81■■□□□ 1.24
TSPAN4-204ENST00000397404 KLRK1P26718 216 aa22.81■■□□□ 1.24
TSPAN4-204ENST00000397404 PTGER2P43116 358 aa22.81■■□□□ 1.24
TSPAN4-204ENST00000397404 TXNRD3Q86VQ6 643 aa22.81■■□□□ 1.24
TSPAN4-204ENST00000397404 SNED1Q8TER0 1413 aa22.81■■□□□ 1.24
TSPAN4-204ENST00000397404 CACNA1SQ13698 1873 aa22.81■■□□□ 1.24
TSPAN4-204ENST00000397404 ZKSCAN1P17029 563 aaPredicted RBP22.8■■□□□ 1.24
TSPAN4-204ENST00000397404 GSTO1P78417 241 aa22.8■■□□□ 1.24
TSPAN4-204ENST00000397404 BECN1Q14457 450 aa22.8■■□□□ 1.24
TSPAN4-204ENST00000397404 SLF2Q8IX21 1173 aa22.8■■□□□ 1.24
TSPAN4-204ENST00000397404 DALRD3Q5D0E6 543 aaKnown RBP22.79■■□□□ 1.24
TSPAN4-204ENST00000397404 ABCF2Q9UG63 623 aa22.79■■□□□ 1.24
TSPAN4-204ENST00000397404 CTNNA3Q9UI47 895 aa22.79■■□□□ 1.24
TSPAN4-204ENST00000397404 MAST3O60307 1309 aa22.79■■□□□ 1.24
TSPAN4-204ENST00000397404 KIAA1551Q9HCM1 1747 aa22.79■■□□□ 1.24
TSPAN4-204ENST00000397404 COL1A1P02452 1464 aaPredicted RBP22.79■■□□□ 1.24
TSPAN4-204ENST00000397404 MAST2Q6P0Q8 1798 aa22.79■■□□□ 1.24
TSPAN4-204ENST00000397404 TCRBV5S4A2TA0A5A2 114 aa22.79■■□□□ 1.24
TSPAN4-204ENST00000397404 WTIPA6NIX2 430 aaPredicted RBP22.79■■□□□ 1.24
TSPAN4-204ENST00000397404 G3V3G9 751 aa22.79■■□□□ 1.24
TSPAN4-204ENST00000397404 FKBP1AP62942 108 aaKnown RBP22.79■■□□□ 1.24
TSPAN4-204ENST00000397404 DCAF8Q5TAQ9 597 aa22.79■■□□□ 1.24
TSPAN4-204ENST00000397404 KCNB2Q92953 911 aa22.79■■□□□ 1.24
TSPAN4-204ENST00000397404 RAI14Q9P0K7 980 aa22.79■■□□□ 1.24
TSPAN4-204ENST00000397404 ZNF532Q9HCE3 1301 aa22.78■■□□□ 1.24
TSPAN4-204ENST00000397404 A0A0G2JLW4 131 aa22.78■■□□□ 1.24
TSPAN4-204ENST00000397404 KRT32Q14532 448 aa22.78■■□□□ 1.24
TSPAN4-204ENST00000397404 CCDC88AQ3V6T2 1871 aa22.78■■□□□ 1.24
TSPAN4-204ENST00000397404 MAGEB6Q8N7X4 407 aa22.78■■□□□ 1.24
TSPAN4-204ENST00000397404 OSBP2Q969R2 916 aa22.78■■□□□ 1.24
TSPAN4-204ENST00000397404 AIDAQ96BJ3 306 aa22.78■■□□□ 1.24
TSPAN4-204ENST00000397404 IL25Q9H293 177 aa22.78■■□□□ 1.24
TSPAN4-204ENST00000397404 ZMYM6O95789 1325 aa22.77■■□□□ 1.24
TSPAN4-204ENST00000397404 PSDA5PKW4 1024 aaPredicted RBP22.77■■□□□ 1.24
TSPAN4-204ENST00000397404 LDHBP07195 334 aaKnown RBP22.77■■□□□ 1.24
TSPAN4-204ENST00000397404 LDHCP07864 332 aa22.77■■□□□ 1.24
TSPAN4-204ENST00000397404 KIAA2012Q0VF49 1180 aa22.77■■□□□ 1.24
TSPAN4-204ENST00000397404 TSGA10IPQ3SY00 556 aa22.77■■□□□ 1.24
TSPAN4-204ENST00000397404 ZNF589Q86UQ0 364 aaPredicted RBP22.77■■□□□ 1.24
TSPAN4-204ENST00000397404 NECTIN1Q15223 517 aa22.76■■□□□ 1.23
TSPAN4-204ENST00000397404 NAA16Q6N069 864 aaPredicted RBP22.76■■□□□ 1.23
TSPAN4-204ENST00000397404 IPO9Q96P70 1041 aaKnown RBP22.76■■□□□ 1.23
TSPAN4-204ENST00000397404 WWC3Q9ULE0 1092 aa22.76■■□□□ 1.23
TSPAN4-204ENST00000397404 IQSEC3Q9UPP2 1182 aaPredicted RBP22.76■■□□□ 1.23
TSPAN4-204ENST00000397404 BRCA1P38398 1863 aaKnown RBP22.76■■□□□ 1.23
TSPAN4-204ENST00000397404 GPAA1O43292 621 aa22.75■■□□□ 1.23
TSPAN4-204ENST00000397404 SNX21Q969T3 373 aa22.75■■□□□ 1.23
TSPAN4-204ENST00000397404 RBM8AQ9Y5S9 174 aaKnown RBP22.75■■□□□ 1.23
TSPAN4-204ENST00000397404 C21orf2O43822 256 aa22.74■■□□□ 1.23
TSPAN4-204ENST00000397404 HSPD1P10809 573 aaKnown RBP22.74■■□□□ 1.23
TSPAN4-204ENST00000397404 PSMA5P28066 241 aa22.74■■□□□ 1.23
TSPAN4-204ENST00000397404 CHAF1AQ13111 956 aaPredicted RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms