RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 GPHNQ9NQX3 736 aaPredicted RBP17.82■□□□□ 0.44
MCF2L-205ENST00000397017 GOLGA6L19H0YKK7 550 aa17.81■□□□□ 0.44
MCF2L-205ENST00000397017 HELLSQ9NRZ9 838 aa17.81■□□□□ 0.44
MCF2L-205ENST00000397017 CAMTA1Q9Y6Y1 1673 aa17.81■□□□□ 0.44
MCF2L-205ENST00000397017 TSPY2A6NKD2 308 aa17.81■□□□□ 0.44
MCF2L-205ENST00000397017 MPHOSPH10O00566 681 aaKnown RBP17.81■□□□□ 0.44
MCF2L-205ENST00000397017 NKX1-1Q15270 411 aaPredicted RBP17.81■□□□□ 0.44
MCF2L-205ENST00000397017 CERKQ8TCT0 537 aa17.81■□□□□ 0.44
MCF2L-205ENST00000397017 M0R2C6 588 aa17.81■□□□□ 0.44
MCF2L-205ENST00000397017 PDE6AP16499 860 aa17.81■□□□□ 0.44
MCF2L-205ENST00000397017 MAP4K1Q92918 833 aa17.81■□□□□ 0.44
MCF2L-205ENST00000397017 MCM9Q9NXL9 1143 aa17.81■□□□□ 0.44
MCF2L-205ENST00000397017 KINO60870 393 aaKnown RBP17.8■□□□□ 0.44
MCF2L-205ENST00000397017 KRT27Q7Z3Y8 459 aa17.8■□□□□ 0.44
MCF2L-205ENST00000397017 VAT1LQ9HCJ6 419 aa17.8■□□□□ 0.44
MCF2L-205ENST00000397017 TAF6LQ9Y6J9 622 aa17.8■□□□□ 0.44
MCF2L-205ENST00000397017 E7EWF7 191 aa17.8■□□□□ 0.44
MCF2L-205ENST00000397017 MCAMP43121 646 aa17.8■□□□□ 0.44
MCF2L-205ENST00000397017 CELF1Q92879 486 aaKnown RBP17.8■□□□□ 0.44
MCF2L-205ENST00000397017 TNMDQ9H2S6 317 aa17.8■□□□□ 0.44
MCF2L-205ENST00000397017 MAST3O60307 1309 aa17.8■□□□□ 0.44
MCF2L-205ENST00000397017 hCG_1642624A0A1W2PR95 340 aa17.79■□□□□ 0.44
MCF2L-205ENST00000397017 PRKAB2O43741 272 aa17.79■□□□□ 0.44
MCF2L-205ENST00000397017 INCENPQ9NQS7 918 aa17.79■□□□□ 0.44
MCF2L-205ENST00000397017 SAP30BPQ9UHR5 308 aaKnown RBP17.79■□□□□ 0.44
MCF2L-205ENST00000397017 PTPDC1A2A3K4 754 aa17.79■□□□□ 0.44
MCF2L-205ENST00000397017 GIMAP6Q6P9H5 292 aa17.79■□□□□ 0.44
MCF2L-205ENST00000397017 CMTR1Q8N1G2 835 aaKnown RBP17.79■□□□□ 0.44
MCF2L-205ENST00000397017 LINC00116Q8NCU8 138 aa17.79■□□□□ 0.44
MCF2L-205ENST00000397017 ARHGEF1Q92888 912 aaKnown RBP17.79■□□□□ 0.44
MCF2L-205ENST00000397017 TSPY26PQ9H489 355 aa17.79■□□□□ 0.44
MCF2L-205ENST00000397017 NALCNQ8IZF0 1738 aa17.79■□□□□ 0.44
MCF2L-205ENST00000397017 SPATA31A5Q5VU36 1347 aa17.79■□□□□ 0.44
MCF2L-205ENST00000397017 MROH5Q6ZUA9 1318 aa17.79■□□□□ 0.44
MCF2L-205ENST00000397017 SPATA31A7Q8IWB4 1347 aa17.79■□□□□ 0.44
MCF2L-205ENST00000397017 F13A1P00488 732 aa17.79■□□□□ 0.44
MCF2L-205ENST00000397017 IQCA1Q86XH1 822 aa17.79■□□□□ 0.44
MCF2L-205ENST00000397017 SPC24Q8NBT2 197 aa17.79■□□□□ 0.44
MCF2L-205ENST00000397017 ZC3H12CQ9C0D7 883 aaKnown RBP17.79■□□□□ 0.44
MCF2L-205ENST00000397017 ERVV-1B6SEH8 477 aa17.79■□□□□ 0.44
MCF2L-205ENST00000397017 EIF5P55010 431 aaKnown RBP17.79■□□□□ 0.44
MCF2L-205ENST00000397017 IARSP41252 1262 aaKnown RBP17.78■□□□□ 0.44
MCF2L-205ENST00000397017 PES1O00541 588 aaKnown RBP17.78■□□□□ 0.44
MCF2L-205ENST00000397017 PIH1D3Q9NQM4 214 aaKnown RBP17.78■□□□□ 0.44
MCF2L-205ENST00000397017 FMN2Q9NZ56 1722 aa17.78■□□□□ 0.44
MCF2L-205ENST00000397017 ZBTB43O43298 467 aa17.78■□□□□ 0.44
MCF2L-205ENST00000397017 RFX5P48382 616 aaPredicted RBP17.78■□□□□ 0.44
MCF2L-205ENST00000397017 RASGRF1Q13972 1273 aa17.78■□□□□ 0.44
MCF2L-205ENST00000397017 RABL6Q3YEC7 729 aaPredicted RBP17.78■□□□□ 0.44
MCF2L-205ENST00000397017 ZNF396Q96N95 335 aaPredicted RBP17.78■□□□□ 0.44
MCF2L-205ENST00000397017 KNDC1Q76NI1 1749 aa17.77■□□□□ 0.44
MCF2L-205ENST00000397017 WTAPQ15007 396 aa17.77■□□□□ 0.44
MCF2L-205ENST00000397017 ISM2Q6H9L7 571 aa17.77■□□□□ 0.44
MCF2L-205ENST00000397017 GADD45BO75293 160 aaPredicted RBP17.77■□□□□ 0.44
MCF2L-205ENST00000397017 ZNF444Q8N0Y2 327 aaPredicted RBP17.77■□□□□ 0.44
MCF2L-205ENST00000397017 ARID3AQ99856 593 aa17.77■□□□□ 0.44
MCF2L-205ENST00000397017 PHKBQ93100 1093 aa17.77■□□□□ 0.43
MCF2L-205ENST00000397017 PKNOX2Q96KN3 472 aa17.77■□□□□ 0.43
MCF2L-205ENST00000397017 ANKRD26Q9UPS8 1709 aa17.77■□□□□ 0.43
MCF2L-205ENST00000397017 CDC37L1Q7L3B6 337 aa17.76■□□□□ 0.43
MCF2L-205ENST00000397017 NCOA3Q9Y6Q9 1424 aa17.76■□□□□ 0.43
MCF2L-205ENST00000397017 XBP1P17861 261 aa17.76■□□□□ 0.43
MCF2L-205ENST00000397017 KIAA2012Q0VF49 1180 aa17.76■□□□□ 0.43
MCF2L-205ENST00000397017 PARP3Q9Y6F1 533 aa17.76■□□□□ 0.43
MCF2L-205ENST00000397017 COL15A1P39059 1388 aa17.76■□□□□ 0.43
MCF2L-205ENST00000397017 A0A0G2JLW4 131 aa17.76■□□□□ 0.43
MCF2L-205ENST00000397017 LDHBP07195 334 aaKnown RBP17.76■□□□□ 0.43
MCF2L-205ENST00000397017 CRNKL1Q9BZJ0 848 aaKnown RBP17.76■□□□□ 0.43
MCF2L-205ENST00000397017 UBN2Q6ZU65 1347 aa17.75■□□□□ 0.43
MCF2L-205ENST00000397017 NFAT5O94916 1531 aa17.75■□□□□ 0.43
MCF2L-205ENST00000397017 CIAO1O76071 339 aa17.75■□□□□ 0.43
MCF2L-205ENST00000397017 JCADQ9P266 1359 aa17.75■□□□□ 0.43
MCF2L-205ENST00000397017 HMGN5P82970 282 aaKnown RBP17.75■□□□□ 0.43
MCF2L-205ENST00000397017 ZSCAN23Q3MJ62 389 aa17.75■□□□□ 0.43
MCF2L-205ENST00000397017 HOMER1Q86YM7 354 aa17.75■□□□□ 0.43
MCF2L-205ENST00000397017 NUP62CLQ9H1M0 184 aa17.75■□□□□ 0.43
MCF2L-205ENST00000397017 ZSWIM6Q9HCJ5 1215 aa17.75■□□□□ 0.43
MCF2L-205ENST00000397017 CFAP45Q9UL16 551 aa17.75■□□□□ 0.43
MCF2L-205ENST00000397017 XRN1Q8IZH2 1706 aaKnown RBP17.75■□□□□ 0.43
MCF2L-205ENST00000397017 KLHL40Q2TBA0 621 aa17.75■□□□□ 0.43
MCF2L-205ENST00000397017 ZMYM1Q5SVZ6 1142 aa17.75■□□□□ 0.43
MCF2L-205ENST00000397017 CYP2D7A0A087X1C5 515 aa17.74■□□□□ 0.43
MCF2L-205ENST00000397017 CDKL5O76039 1030 aa17.74■□□□□ 0.43
MCF2L-205ENST00000397017 CYP2E1P05181 493 aaPredicted RBP17.74■□□□□ 0.43
MCF2L-205ENST00000397017 MARCKSP29966 332 aaPredicted RBP17.74■□□□□ 0.43
MCF2L-205ENST00000397017 NECTIN1Q15223 517 aa17.74■□□□□ 0.43
MCF2L-205ENST00000397017 INTS4Q96HW7 963 aaKnown RBP17.74■□□□□ 0.43
MCF2L-205ENST00000397017 ALG1Q9BT22 464 aa17.74■□□□□ 0.43
MCF2L-205ENST00000397017 RNF41Q9H4P4 317 aaPredicted RBP17.74■□□□□ 0.43
MCF2L-205ENST00000397017 DYNLL1P63167 89 aaKnown RBP17.74■□□□□ 0.43
MCF2L-205ENST00000397017 INTS5Q6P9B9 1019 aaKnown RBP17.74■□□□□ 0.43
MCF2L-205ENST00000397017 SERPINB2P05120 415 aa17.74■□□□□ 0.43
MCF2L-205ENST00000397017 SETD1AO15047 1707 aaKnown RBP17.73■□□□□ 0.43
MCF2L-205ENST00000397017 AKAP12Q02952 1782 aa17.73■□□□□ 0.43
MCF2L-205ENST00000397017 BIN1O00499 593 aa17.73■□□□□ 0.43
MCF2L-205ENST00000397017 VPS72Q15906 364 aa17.73■□□□□ 0.43
MCF2L-205ENST00000397017 DOK7Q18PE1 504 aa17.73■□□□□ 0.43
MCF2L-205ENST00000397017 CRACR2BQ8N4Y2 399 aaPredicted RBP17.73■□□□□ 0.43
MCF2L-205ENST00000397017 CTCFLQ8NI51 663 aaPredicted RBP17.73■□□□□ 0.43
MCF2L-205ENST00000397017 RPS6KA4O75676 772 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms