RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 IL1R1P14778 569 aa22.28■■□□□ 1.16
EXOSC3-202ENST00000396521 KLRK1P26718 216 aa22.27■■□□□ 1.16
EXOSC3-202ENST00000396521 MKRN3Q13064 507 aaKnown RBP22.27■■□□□ 1.16
EXOSC3-202ENST00000396521 PRKG1Q13976 671 aa22.27■■□□□ 1.16
EXOSC3-202ENST00000396521 INTS3Q68E01 1043 aaKnown RBP22.27■■□□□ 1.16
EXOSC3-202ENST00000396521 OTUD7BQ6GQQ9 843 aa22.27■■□□□ 1.16
EXOSC3-202ENST00000396521 IFNL1Q8IU54 200 aa22.26■■□□□ 1.15
EXOSC3-202ENST00000396521 SPDYE2BA6NHP3 402 aa22.25■■□□□ 1.15
EXOSC3-202ENST00000396521 SPDYE6P0CI01 402 aa22.25■■□□□ 1.15
EXOSC3-202ENST00000396521 IREB2P48200 963 aaKnown RBP22.25■■□□□ 1.15
EXOSC3-202ENST00000396521 WDR63Q8IWG1 891 aa22.25■■□□□ 1.15
EXOSC3-202ENST00000396521 IRS2Q9Y4H2 1338 aa22.25■■□□□ 1.15
EXOSC3-202ENST00000396521 TNFAIP1Q13829 316 aa22.24■■□□□ 1.15
EXOSC3-202ENST00000396521 CCDC57Q2TAC2 916 aa22.24■■□□□ 1.15
EXOSC3-202ENST00000396521 CERS5Q8N5B7 392 aa22.24■■□□□ 1.15
EXOSC3-202ENST00000396521 VAMP4O75379 141 aa22.23■■□□□ 1.15
EXOSC3-202ENST00000396521 TAF5LO75529 589 aa22.23■■□□□ 1.15
EXOSC3-202ENST00000396521 FOXO4P98177 505 aa22.23■■□□□ 1.15
EXOSC3-202ENST00000396521 CFAP100Q494V2 611 aa22.23■■□□□ 1.15
EXOSC3-202ENST00000396521 GCC1Q96CN9 775 aa22.23■■□□□ 1.15
EXOSC3-202ENST00000396521 WNK4Q96J92 1243 aa22.23■■□□□ 1.15
EXOSC3-202ENST00000396521 LDHAL6AQ6ZMR3 332 aa22.22■■□□□ 1.15
EXOSC3-202ENST00000396521 ANKRD13AQ8IZ07 590 aa22.22■■□□□ 1.15
EXOSC3-202ENST00000396521 ERO1AQ96HE7 468 aa22.22■■□□□ 1.15
EXOSC3-202ENST00000396521 TAF7LQ5H9L4 462 aa22.21■■□□□ 1.15
EXOSC3-202ENST00000396521 BEND3Q5T5X7 828 aa22.21■■□□□ 1.15
EXOSC3-202ENST00000396521 HELBQ8NG08 1087 aaPredicted RBP22.21■■□□□ 1.15
EXOSC3-202ENST00000396521 PRMT6Q96LA8 375 aaPredicted RBP22.21■■□□□ 1.15
EXOSC3-202ENST00000396521 CHMP3Q9Y3E7 222 aa22.21■■□□□ 1.15
EXOSC3-202ENST00000396521 FANCIQ9NVI1 1328 aa22.21■■□□□ 1.15
EXOSC3-202ENST00000396521 LMBR1LQ6UX01 489 aa22.2■■□□□ 1.14
EXOSC3-202ENST00000396521 R3HDMLQ9H3Y0 253 aa22.2■■□□□ 1.14
EXOSC3-202ENST00000396521 VEZTQ9HBM0 779 aa22.2■■□□□ 1.14
EXOSC3-202ENST00000396521 CNNM1Q9NRU3 951 aa22.2■■□□□ 1.14
EXOSC3-202ENST00000396521 SERPINA10Q9UK55 444 aa22.2■■□□□ 1.14
EXOSC3-202ENST00000396521 TRIM17Q9Y577 477 aa22.2■■□□□ 1.14
EXOSC3-202ENST00000396521 FAM205AQ6ZU69 1335 aa22.2■■□□□ 1.14
EXOSC3-202ENST00000396521 ZNF646O15015 1829 aaPredicted RBP22.2■■□□□ 1.14
EXOSC3-202ENST00000396521 GRM8O00222 908 aa22.19■■□□□ 1.14
EXOSC3-202ENST00000396521 RBM5P52756 815 aaKnown RBP eCLIP22.19■■□□□ 1.141e-14■■■■■ 51.6
EXOSC3-202ENST00000396521 UBE4AQ14139 1066 aa22.19■■□□□ 1.14
EXOSC3-202ENST00000396521 RASA3Q14644 834 aa22.19■■□□□ 1.14
EXOSC3-202ENST00000396521 ARHGEF6Q15052 776 aa22.19■■□□□ 1.14
EXOSC3-202ENST00000396521 CLRN2A0PK11 232 aa22.18■■□□□ 1.14
EXOSC3-202ENST00000396521 TESPA1A2RU30 521 aaPredicted RBP22.18■■□□□ 1.14
EXOSC3-202ENST00000396521 F8W031 263 aaPredicted RBP22.18■■□□□ 1.14
EXOSC3-202ENST00000396521 SNAP23O00161 211 aa22.18■■□□□ 1.14
EXOSC3-202ENST00000396521 OTOP1Q7RTM1 612 aa22.18■■□□□ 1.14
EXOSC3-202ENST00000396521 CLMNQ96JQ2 1002 aa22.18■■□□□ 1.14
EXOSC3-202ENST00000396521 IGF2BP3O00425 579 aaKnown RBP eCLIP22.17■■□□□ 1.14
EXOSC3-202ENST00000396521 USP2O75604 605 aaPredicted RBP22.17■■□□□ 1.14
EXOSC3-202ENST00000396521 NBPF12Q5TAG4 269 aaPredicted RBP22.17■■□□□ 1.14
EXOSC3-202ENST00000396521 TDRD7Q8NHU6 1098 aaKnown RBP22.17■■□□□ 1.14
EXOSC3-202ENST00000396521 C9orf78Q9NZ63 289 aaPredicted RBP22.17■■□□□ 1.14
EXOSC3-202ENST00000396521 SPEF2Q9C093 1822 aa22.17■■□□□ 1.14
EXOSC3-202ENST00000396521 ALDH1L1O75891 902 aa22.16■■□□□ 1.14
EXOSC3-202ENST00000396521 HIBADHP31937 336 aaKnown RBP22.16■■□□□ 1.14
EXOSC3-202ENST00000396521 SPDYE2Q495Y8 402 aa22.16■■□□□ 1.14
EXOSC3-202ENST00000396521 FZD1Q9UP38 647 aa22.16■■□□□ 1.14
EXOSC3-202ENST00000396521 CACNA1FO60840 1977 aa22.16■■□□□ 1.14
EXOSC3-202ENST00000396521 TNNI2P48788 182 aa22.15■■□□□ 1.14
EXOSC3-202ENST00000396521 EXOSC9Q06265 439 aaKnown RBP22.15■■□□□ 1.14
EXOSC3-202ENST00000396521 MFSD14BQ5SR56 506 aa22.15■■□□□ 1.14
EXOSC3-202ENST00000396521 PTPN22Q9Y2R2 807 aa22.15■■□□□ 1.14
EXOSC3-202ENST00000396521 SSC5DA1L4H1 1573 aa22.15■■□□□ 1.14
EXOSC3-202ENST00000396521 F6X3S4 739 aa22.14■■□□□ 1.13
EXOSC3-202ENST00000396521 PLIN1O60240 522 aa22.14■■□□□ 1.13
EXOSC3-202ENST00000396521 SP3Q02447 781 aa22.14■■□□□ 1.13
EXOSC3-202ENST00000396521 EFCC1Q9HA90 598 aa22.14■■□□□ 1.13
EXOSC3-202ENST00000396521 TTF2Q9UNY4 1162 aaKnown RBP22.14■■□□□ 1.13
EXOSC3-202ENST00000396521 WDHD1O75717 1129 aaPredicted RBP22.13■■□□□ 1.13
EXOSC3-202ENST00000396521 HDLBPQ00341 1268 aaKnown RBP22.13■■□□□ 1.13
EXOSC3-202ENST00000396521 CRHR2Q13324 411 aa22.13■■□□□ 1.13
EXOSC3-202ENST00000396521 CCDC184Q52MB2 194 aa22.13■■□□□ 1.13
EXOSC3-202ENST00000396521 ZNF70Q9UC06 446 aaPredicted RBP22.13■■□□□ 1.13
EXOSC3-202ENST00000396521 PCDHAC2Q9Y5I4 1007 aa22.13■■□□□ 1.13
EXOSC3-202ENST00000396521 DZIP1LQ8IYY4 767 aaKnown RBP22.12■■□□□ 1.13
EXOSC3-202ENST00000396521 ARMC5Q96C12 935 aa22.12■■□□□ 1.13
EXOSC3-202ENST00000396521 ZNF594Q96JF6 807 aaPredicted RBP22.12■■□□□ 1.13
EXOSC3-202ENST00000396521 MROH5Q6ZUA9 1318 aa22.11■■□□□ 1.13
EXOSC3-202ENST00000396521 GTF2A2P52657 109 aa22.11■■□□□ 1.13
EXOSC3-202ENST00000396521 EPHA10Q5JZY3 1008 aa22.11■■□□□ 1.13
EXOSC3-202ENST00000396521 TBC1D22AQ8WUA7 517 aa22.11■■□□□ 1.13
EXOSC3-202ENST00000396521 OPTNQ96CV9 577 aa22.11■■□□□ 1.13
EXOSC3-202ENST00000396521 HOOK2Q96ED9 719 aa22.11■■□□□ 1.13
EXOSC3-202ENST00000396521 FAM84BQ96KN1 310 aaPredicted RBP22.11■■□□□ 1.13
EXOSC3-202ENST00000396521 SRCIN1Q9C0H9 1055 aa22.11■■□□□ 1.13
EXOSC3-202ENST00000396521 MRS2Q9HD23 443 aa22.11■■□□□ 1.13
EXOSC3-202ENST00000396521 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.11■■□□□ 1.13
EXOSC3-202ENST00000396521 GJA5P36382 358 aa22.1■■□□□ 1.13
EXOSC3-202ENST00000396521 MAP3K9P80192 1104 aa22.1■■□□□ 1.13
EXOSC3-202ENST00000396521 VPS37DQ86XT2 251 aa22.1■■□□□ 1.13
EXOSC3-202ENST00000396521 PTPN18Q99952 460 aa22.1■■□□□ 1.13
EXOSC3-202ENST00000396521 MRIQ9BWK5 157 aa22.1■■□□□ 1.13
EXOSC3-202ENST00000396521 NBPF11Q86T75 865 aa22.09■■□□□ 1.13
EXOSC3-202ENST00000396521 CD99L2Q8TCZ2 262 aa22.09■■□□□ 1.13
EXOSC3-202ENST00000396521 MS4A4AQ96JQ5 239 aa22.09■■□□□ 1.13
EXOSC3-202ENST00000396521 TDRD3Q9H7E2 651 aaKnown RBP22.09■■□□□ 1.13
EXOSC3-202ENST00000396521 ZFYVE28Q9HCC9 887 aa22.09■■□□□ 1.13
EXOSC3-202ENST00000396521 JAG2Q9Y219 1238 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms