RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 BECN2A8MW95 431 aa18.35■□□□□ 0.53
HOXA3-202ENST00000396352 NEMFO60524 1076 aa18.35■□□□□ 0.53
HOXA3-202ENST00000396352 A1BGP04217 495 aa18.35■□□□□ 0.53
HOXA3-202ENST00000396352 ZSCAN20P17040 1043 aaPredicted RBP18.35■□□□□ 0.53
HOXA3-202ENST00000396352 ADALQ6DHV7 355 aa18.35■□□□□ 0.53
HOXA3-202ENST00000396352 ZBTB3Q9H5J0 574 aa18.35■□□□□ 0.53
HOXA3-202ENST00000396352 KCNA4P22459 653 aa18.34■□□□□ 0.53
HOXA3-202ENST00000396352 CCZ1BP86790 482 aa18.34■□□□□ 0.53
HOXA3-202ENST00000396352 CCZ1P86791 482 aaPredicted RBP18.34■□□□□ 0.53
HOXA3-202ENST00000396352 A0A1W2PQ27 194 aa18.34■□□□□ 0.53
HOXA3-202ENST00000396352 A0A1W2PQ64 194 aa18.34■□□□□ 0.53
HOXA3-202ENST00000396352 A0A1W2PQD8 194 aa18.34■□□□□ 0.53
HOXA3-202ENST00000396352 CEP57L1Q8IYX8 460 aa18.34■□□□□ 0.53
HOXA3-202ENST00000396352 AOPEPQ8N6M6 819 aa18.34■□□□□ 0.53
HOXA3-202ENST00000396352 LINC00301Q8NCQ3 95 aa18.34■□□□□ 0.53
HOXA3-202ENST00000396352 HPS5Q9UPZ3 1129 aa18.34■□□□□ 0.53
HOXA3-202ENST00000396352 A0A1B0GVL5 298 aa18.33■□□□□ 0.53
HOXA3-202ENST00000396352 NDUFA8P51970 172 aa18.33■□□□□ 0.53
HOXA3-202ENST00000396352 OTUD7BQ6GQQ9 843 aa18.33■□□□□ 0.53
HOXA3-202ENST00000396352 NYAP1Q6ZVC0 841 aa18.33■□□□□ 0.53
HOXA3-202ENST00000396352 CHMP4CQ96CF2 233 aa18.33■□□□□ 0.53
HOXA3-202ENST00000396352 CLIC4Q9Y696 253 aa18.33■□□□□ 0.53
HOXA3-202ENST00000396352 U2AF2P26368 475 aaKnown RBP eCLIP18.33■□□□□ 0.52
HOXA3-202ENST00000396352 CPDO75976 1380 aa18.33■□□□□ 0.52
HOXA3-202ENST00000396352 CCDC69A6NI79 296 aa18.33■□□□□ 0.52
HOXA3-202ENST00000396352 SKILP12757 684 aa18.33■□□□□ 0.52
HOXA3-202ENST00000396352 ADORA1P30542 326 aa18.33■□□□□ 0.52
HOXA3-202ENST00000396352 FKBP4Q02790 459 aaKnown RBP eCLIP18.33■□□□□ 0.52
HOXA3-202ENST00000396352 CEP135Q66GS9 1140 aa18.33■□□□□ 0.52
HOXA3-202ENST00000396352 NBPF11Q86T75 865 aa18.33■□□□□ 0.52
HOXA3-202ENST00000396352 MB21D2Q8IYB1 491 aaPredicted RBP18.33■□□□□ 0.52
HOXA3-202ENST00000396352 STRCP1A6NGW2 1772 aa18.32■□□□□ 0.52
HOXA3-202ENST00000396352 HAND2P61296 217 aa18.32■□□□□ 0.52
HOXA3-202ENST00000396352 CCDC112Q8NEF3 446 aa18.32■□□□□ 0.52
HOXA3-202ENST00000396352 POLR3EQ9NVU0 708 aa18.32■□□□□ 0.52
HOXA3-202ENST00000396352 DMTNQ08495 405 aa18.31■□□□□ 0.52
HOXA3-202ENST00000396352 CTNNA3Q9UI47 895 aa18.31■□□□□ 0.52
HOXA3-202ENST00000396352 SHANK3Q9BYB0 1731 aa18.31■□□□□ 0.52
HOXA3-202ENST00000396352 FGAP02671 866 aa18.31■□□□□ 0.52
HOXA3-202ENST00000396352 ANTXR2P58335 489 aa18.31■□□□□ 0.52
HOXA3-202ENST00000396352 SCARF1Q14162 830 aa18.31■□□□□ 0.52
HOXA3-202ENST00000396352 FILIP1Q7Z7B0 1213 aa18.31■□□□□ 0.52
HOXA3-202ENST00000396352 FBXO18Q8NFZ0 1043 aa18.31■□□□□ 0.52
HOXA3-202ENST00000396352 NAT10Q9H0A0 1025 aaKnown RBP18.31■□□□□ 0.52
HOXA3-202ENST00000396352 CEP126Q9P2H0 1117 aa18.31■□□□□ 0.52
HOXA3-202ENST00000396352 SPDYE4A6NLX3 237 aa18.31■□□□□ 0.52
HOXA3-202ENST00000396352 PRC1O43663 620 aa18.31■□□□□ 0.52
HOXA3-202ENST00000396352 ATF3P18847 181 aa18.31■□□□□ 0.52
HOXA3-202ENST00000396352 NAA30Q147X3 362 aaPredicted RBP18.31■□□□□ 0.52
HOXA3-202ENST00000396352 IMMTQ16891 758 aaKnown RBP18.31■□□□□ 0.52
HOXA3-202ENST00000396352 FBXW7Q969H0 707 aa18.31■□□□□ 0.52
HOXA3-202ENST00000396352 XAGE2Q96GT9 111 aa18.31■□□□□ 0.52
HOXA3-202ENST00000396352 C8orf76Q96K31 380 aa18.31■□□□□ 0.52
HOXA3-202ENST00000396352 KIAA1468Q9P260 1216 aa18.31■□□□□ 0.52
HOXA3-202ENST00000396352 PCDH11XQ9BZA7 1347 aa18.3■□□□□ 0.52
HOXA3-202ENST00000396352 PCDH11YQ9BZA8 1340 aa18.3■□□□□ 0.52
HOXA3-202ENST00000396352 YEATS4O95619 227 aa18.3■□□□□ 0.52
HOXA3-202ENST00000396352 DPCR1Q3MIW9 517 aa18.3■□□□□ 0.52
HOXA3-202ENST00000396352 KCND1Q9NSA2 647 aa18.3■□□□□ 0.52
HOXA3-202ENST00000396352 DCCP43146 1447 aa18.3■□□□□ 0.52
HOXA3-202ENST00000396352 KLF18A0A0U1RQI7 1052 aa18.3■□□□□ 0.52
HOXA3-202ENST00000396352 POLR3DP05423 398 aaPredicted RBP18.3■□□□□ 0.52
HOXA3-202ENST00000396352 KCNG4Q8TDN1 519 aa18.3■□□□□ 0.52
HOXA3-202ENST00000396352 BPIFA3Q9BQP9 254 aa18.3■□□□□ 0.52
HOXA3-202ENST00000396352 SDF4Q9BRK5 362 aa18.3■□□□□ 0.52
HOXA3-202ENST00000396352 TNS2Q63HR2 1409 aa18.29■□□□□ 0.52
HOXA3-202ENST00000396352 GOLGA8BA8MQT2 603 aa18.29■□□□□ 0.52
HOXA3-202ENST00000396352 ZFYP08048 801 aaPredicted RBP18.29■□□□□ 0.52
HOXA3-202ENST00000396352 WASHC4Q2M389 1173 aa18.29■□□□□ 0.52
HOXA3-202ENST00000396352 CCDC158Q5M9N0 1113 aa18.29■□□□□ 0.52
HOXA3-202ENST00000396352 TTC39AQ5SRH9 613 aa18.29■□□□□ 0.52
HOXA3-202ENST00000396352 UTP14CQ5TAP6 766 aaKnown RBP18.29■□□□□ 0.52
HOXA3-202ENST00000396352 ISCA1Q9BUE6 129 aa18.29■□□□□ 0.52
HOXA3-202ENST00000396352 PUS7LQ9H0K6 701 aaKnown RBP18.29■□□□□ 0.52
HOXA3-202ENST00000396352 GJB4Q9NTQ9 266 aa18.29■□□□□ 0.52
HOXA3-202ENST00000396352 AKAP11Q9UKA4 1901 aa18.29■□□□□ 0.52
HOXA3-202ENST00000396352 ECM29Q5VYK3 1845 aa18.29■□□□□ 0.52
HOXA3-202ENST00000396352 KIF28PB7ZC32 967 aa18.29■□□□□ 0.52
HOXA3-202ENST00000396352 STK38Q15208 465 aa18.29■□□□□ 0.52
HOXA3-202ENST00000396352 MYSM1Q5VVJ2 828 aa18.29■□□□□ 0.52
HOXA3-202ENST00000396352 ERVV-2B6SEH9 535 aa18.29■□□□□ 0.52
HOXA3-202ENST00000396352 HSP90AB3PQ58FF7 597 aa18.29■□□□□ 0.52
HOXA3-202ENST00000396352 OSBPL5Q9H0X9 879 aaPredicted RBP18.29■□□□□ 0.52
HOXA3-202ENST00000396352 SPTLC2O15270 562 aa18.28■□□□□ 0.52
HOXA3-202ENST00000396352 LRRFIP1Q32MZ4 808 aaKnown RBP18.28■□□□□ 0.52
HOXA3-202ENST00000396352 BRAPQ7Z569 592 aa18.28■□□□□ 0.52
HOXA3-202ENST00000396352 CCAR2Q8N163 923 aaKnown RBP18.28■□□□□ 0.52
HOXA3-202ENST00000396352 ZNF592Q92610 1267 aa18.28■□□□□ 0.52
HOXA3-202ENST00000396352 ORC3Q9UBD5 711 aaPredicted RBP18.28■□□□□ 0.52
HOXA3-202ENST00000396352 PTPN14Q15678 1187 aa18.28■□□□□ 0.52
HOXA3-202ENST00000396352 CCDC57Q2TAC2 916 aa18.28■□□□□ 0.52
HOXA3-202ENST00000396352 APPBP2Q92624 585 aa18.28■□□□□ 0.52
HOXA3-202ENST00000396352 SPATA31A3Q5VYP0 1347 aa18.28■□□□□ 0.52
HOXA3-202ENST00000396352 DHX16O60231 1041 aaKnown RBP18.27■□□□□ 0.52
HOXA3-202ENST00000396352 ZAP70P43403 619 aa18.27■□□□□ 0.52
HOXA3-202ENST00000396352 RAB11FIP4Q86YS3 637 aa18.27■□□□□ 0.52
HOXA3-202ENST00000396352 ZCRB1Q8TBF4 217 aaKnown RBP18.27■□□□□ 0.52
HOXA3-202ENST00000396352 AKAP2Q9Y2D5 859 aa18.27■□□□□ 0.52
HOXA3-202ENST00000396352 PI16Q6UXB8 463 aa18.27■□□□□ 0.52
HOXA3-202ENST00000396352 FBXO3Q9UK99 471 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms