RNA–Protein interactions for RNA: ENST00000396307.6

RAB27A-202, Transcript of RAB27A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB27A, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB27A-202ENST00000396307 CACNA1SQ13698 1873 aa9.8□□□□□ -0.84
RAB27A-202ENST00000396307 ARID4AP29374 1257 aaPredicted RBP9.8□□□□□ -0.84
RAB27A-202ENST00000396307 GTF2F1P35269 517 aaKnown RBP eCLIP9.8□□□□□ -0.84
RAB27A-202ENST00000396307 RBM8AQ9Y5S9 174 aaKnown RBP9.8□□□□□ -0.84
RAB27A-202ENST00000396307 IRF6O14896 467 aa9.8□□□□□ -0.84
RAB27A-202ENST00000396307 EP400NLQ6ZTU2 488 aa9.8□□□□□ -0.84
RAB27A-202ENST00000396307 KLHDC4Q8TBB5 520 aa9.8□□□□□ -0.84
RAB27A-202ENST00000396307 NUTM2BA6NNL0 878 aaPredicted RBP9.79□□□□□ -0.84
RAB27A-202ENST00000396307 NUTM2EB1AL46 878 aaPredicted RBP9.79□□□□□ -0.84
RAB27A-202ENST00000396307 SMC2O95347 1197 aa9.79□□□□□ -0.84
RAB27A-202ENST00000396307 HSP90AA4PQ58FG1 418 aa9.79□□□□□ -0.84
RAB27A-202ENST00000396307 RC3H1Q5TC82 1133 aaKnown RBP9.79□□□□□ -0.84
RAB27A-202ENST00000396307 BLOC1S2Q6QNY1 142 aa9.79□□□□□ -0.84
RAB27A-202ENST00000396307 NUTM2AQ8IVF1 878 aaPredicted RBP9.79□□□□□ -0.84
RAB27A-202ENST00000396307 STK11IPQ8N1F8 1099 aa9.79□□□□□ -0.84
RAB27A-202ENST00000396307 SMARCC1Q92922 1105 aaPredicted RBP9.79□□□□□ -0.84
RAB27A-202ENST00000396307 LSG1Q9H089 658 aaKnown RBP9.79□□□□□ -0.84
RAB27A-202ENST00000396307 TPM3P06753 285 aa9.79□□□□□ -0.84
RAB27A-202ENST00000396307 MMP14P50281 582 aa9.79□□□□□ -0.84
RAB27A-202ENST00000396307 ZNF75DP51815 510 aa9.79□□□□□ -0.84
RAB27A-202ENST00000396307 FLAD1Q8NFF5 587 aa9.79□□□□□ -0.84
RAB27A-202ENST00000396307 RUFY2Q8WXA3 655 aa9.79□□□□□ -0.84
RAB27A-202ENST00000396307 KIF1BPQ96EK5 621 aa9.79□□□□□ -0.84
RAB27A-202ENST00000396307 SDF4Q9BRK5 362 aa9.79□□□□□ -0.84
RAB27A-202ENST00000396307 CTNNA3Q9UI47 895 aa9.79□□□□□ -0.84
RAB27A-202ENST00000396307 ADAMTS2O95450 1211 aa9.79□□□□□ -0.84
RAB27A-202ENST00000396307 PSEN1P49768 467 aa9.79□□□□□ -0.84
RAB27A-202ENST00000396307 GNL2Q13823 731 aaKnown RBP9.79□□□□□ -0.84
RAB27A-202ENST00000396307 SMTNL1A8MU46 457 aa9.78□□□□□ -0.84
RAB27A-202ENST00000396307 CHGBP05060 677 aa9.78□□□□□ -0.84
RAB27A-202ENST00000396307 CCT2P78371 535 aaKnown RBP9.78□□□□□ -0.84
RAB27A-202ENST00000396307 SKIDA1Q1XH10 827 aa9.78□□□□□ -0.84
RAB27A-202ENST00000396307 ERCC6LQ2NKX8 1250 aa9.78□□□□□ -0.84
RAB27A-202ENST00000396307 PRR29P0C7W0 189 aa9.78□□□□□ -0.84
RAB27A-202ENST00000396307 ME1P48163 572 aa9.78□□□□□ -0.84
RAB27A-202ENST00000396307 RAB11FIP4Q86YS3 637 aa9.78□□□□□ -0.84
RAB27A-202ENST00000396307 EGFL6Q8IUX8 553 aa9.78□□□□□ -0.84
RAB27A-202ENST00000396307 TTC14Q96N46 770 aa9.78□□□□□ -0.84
RAB27A-202ENST00000396307 MYO5AQ9Y4I1 1855 aaKnown RBP9.78□□□□□ -0.84
RAB27A-202ENST00000396307 CCDC69A6NI79 296 aa9.77□□□□□ -0.84
RAB27A-202ENST00000396307 DDB1Q16531 1140 aa9.77□□□□□ -0.84
RAB27A-202ENST00000396307 KMT5BQ4FZB7 885 aa9.77□□□□□ -0.84
RAB27A-202ENST00000396307 HSP90AB4PQ58FF6 505 aa9.77□□□□□ -0.84
RAB27A-202ENST00000396307 KRT222Q8N1A0 295 aa9.77□□□□□ -0.84
RAB27A-202ENST00000396307 ANKRD7Q92527 254 aa9.77□□□□□ -0.84
RAB27A-202ENST00000396307 FUCA2Q9BTY2 467 aa9.77□□□□□ -0.84
RAB27A-202ENST00000396307 TEFQ10587 303 aa9.77□□□□□ -0.85
RAB27A-202ENST00000396307 LMOD2Q6P5Q4 547 aa9.77□□□□□ -0.85
RAB27A-202ENST00000396307 PI4K2BQ8TCG2 481 aa9.77□□□□□ -0.85
RAB27A-202ENST00000396307 FEZ1Q99689 392 aa9.77□□□□□ -0.85
RAB27A-202ENST00000396307 CHPF2Q9P2E5 772 aa9.77□□□□□ -0.85
RAB27A-202ENST00000396307 WDR90Q96KV7 1748 aa9.77□□□□□ -0.85
RAB27A-202ENST00000396307 EXOC5O00471 708 aa9.77□□□□□ -0.85
RAB27A-202ENST00000396307 CWF19L2Q2TBE0 894 aaKnown RBP9.77□□□□□ -0.85
RAB27A-202ENST00000396307 CREB3L3Q68CJ9 461 aa9.77□□□□□ -0.85
RAB27A-202ENST00000396307 FBXO38Q6PIJ6 1188 aa9.77□□□□□ -0.85
RAB27A-202ENST00000396307 C11orf57Q6ZUT1 292 aaPredicted RBP9.77□□□□□ -0.85
RAB27A-202ENST00000396307 CHST3Q7LGC8 479 aa9.77□□□□□ -0.85
RAB27A-202ENST00000396307 ZNF513Q8N8E2 541 aaPredicted RBP9.77□□□□□ -0.85
RAB27A-202ENST00000396307 LEO1Q8WVC0 666 aaPredicted RBP9.77□□□□□ -0.85
RAB27A-202ENST00000396307 BRF1Q92994 677 aa9.77□□□□□ -0.85
RAB27A-202ENST00000396307 CCDC88AQ3V6T2 1871 aa9.77□□□□□ -0.85
RAB27A-202ENST00000396307 RTL9Q8NET4 1388 aa9.76□□□□□ -0.85
RAB27A-202ENST00000396307 GLRX3O76003 335 aaKnown RBP9.76□□□□□ -0.85
RAB27A-202ENST00000396307 NMIQ13287 307 aaPredicted RBP9.76□□□□□ -0.85
RAB27A-202ENST00000396307 SYT10Q6XYQ8 523 aa9.76□□□□□ -0.85
RAB27A-202ENST00000396307 MARCH10Q8NA82 808 aaPredicted RBP9.76□□□□□ -0.85
RAB27A-202ENST00000396307 PIK3R5Q8WYR1 880 aa9.76□□□□□ -0.85
RAB27A-202ENST00000396307 AKT1S1Q96B36 256 aa9.76□□□□□ -0.85
RAB27A-202ENST00000396307 EYA1Q99502 592 aa9.76□□□□□ -0.85
RAB27A-202ENST00000396307 ADRA2BP18089 450 aa9.76□□□□□ -0.85
RAB27A-202ENST00000396307 EVA1CP58658 441 aa9.76□□□□□ -0.85
RAB27A-202ENST00000396307 SF3A1Q15459 793 aaKnown RBP9.76□□□□□ -0.85
RAB27A-202ENST00000396307 AOPEPQ8N6M6 819 aa9.76□□□□□ -0.85
RAB27A-202ENST00000396307 KIF18AQ8NI77 898 aa9.76□□□□□ -0.85
RAB27A-202ENST00000396307 CNTNAP4Q9C0A0 1308 aa9.76□□□□□ -0.85
RAB27A-202ENST00000396307 CCDC73Q6ZRK6 1079 aa9.76□□□□□ -0.85
RAB27A-202ENST00000396307 SCAND2PQ9GZW5 306 aaPredicted RBP9.76□□□□□ -0.85
RAB27A-202ENST00000396307 C10orf71Q711Q0 1435 aa9.75□□□□□ -0.85
RAB27A-202ENST00000396307 KCNQ3O43525 872 aa9.75□□□□□ -0.85
RAB27A-202ENST00000396307 KINO60870 393 aaKnown RBP9.75□□□□□ -0.85
RAB27A-202ENST00000396307 PDCP20941 246 aa9.75□□□□□ -0.85
RAB27A-202ENST00000396307 TNNT3P45378 269 aaPredicted RBP9.75□□□□□ -0.85
RAB27A-202ENST00000396307 ST3GAL1Q11201 340 aa9.75□□□□□ -0.85
RAB27A-202ENST00000396307 CCDC129Q6ZRS4 1044 aa9.75□□□□□ -0.85
RAB27A-202ENST00000396307 TMEM87AQ8NBN3 555 aa9.75□□□□□ -0.85
RAB27A-202ENST00000396307 GPATCH3Q96I76 525 aa9.75□□□□□ -0.85
RAB27A-202ENST00000396307 EPC1Q9H2F5 836 aa9.75□□□□□ -0.85
RAB27A-202ENST00000396307 ZSWIM4Q9H7M6 989 aa9.75□□□□□ -0.85
RAB27A-202ENST00000396307 PGBD1Q96JS3 809 aa9.75□□□□□ -0.85
RAB27A-202ENST00000396307 SH2B1Q9NRF2 756 aaPredicted RBP9.75□□□□□ -0.85
RAB27A-202ENST00000396307 ECHDC1Q9NTX5 307 aa9.75□□□□□ -0.85
RAB27A-202ENST00000396307 DDX41Q9UJV9 622 aaKnown RBP9.75□□□□□ -0.85
RAB27A-202ENST00000396307 LOC102724159A0A0B4J2E5 919 aa9.75□□□□□ -0.85
RAB27A-202ENST00000396307 CTIFO43310 598 aaKnown RBP9.75□□□□□ -0.85
RAB27A-202ENST00000396307 PWP2Q15269 919 aaKnown RBP9.75□□□□□ -0.85
RAB27A-202ENST00000396307 VPS53Q5VIR6 699 aa9.75□□□□□ -0.85
RAB27A-202ENST00000396307 OTUD7BQ6GQQ9 843 aa9.75□□□□□ -0.85
RAB27A-202ENST00000396307 LRRC8AQ8IWT6 810 aa9.75□□□□□ -0.85
RAB27A-202ENST00000396307 CCAR1Q8IX12 1150 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms