RNA–Protein interactions for RNA: ENST00000395466.6

SNCAIP-204, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-204ENST00000395466 FAM184AQ8NB25 1140 aa16.36■□□□□ 0.21
SNCAIP-204ENST00000395466 LEO1Q8WVC0 666 aaPredicted RBP16.36■□□□□ 0.21
SNCAIP-204ENST00000395466 LPIN2Q92539 896 aa16.36■□□□□ 0.21
SNCAIP-204ENST00000395466 UTP14AQ9BVJ6 771 aaKnown RBP16.36■□□□□ 0.21
SNCAIP-204ENST00000395466 TFIP11Q9UBB9 837 aaKnown RBP16.36■□□□□ 0.21
SNCAIP-204ENST00000395466 UQCRFS1P1P0C7P4 283 aa16.35■□□□□ 0.21
SNCAIP-204ENST00000395466 CCT2P78371 535 aaKnown RBP16.35■□□□□ 0.21
SNCAIP-204ENST00000395466 HMGN5P82970 282 aaKnown RBP16.35■□□□□ 0.21
SNCAIP-204ENST00000395466 UVSSAQ2YD98 709 aa16.35■□□□□ 0.21
SNCAIP-204ENST00000395466 NAA16Q6N069 864 aaPredicted RBP16.35■□□□□ 0.21
SNCAIP-204ENST00000395466 ZSCAN25Q6NSZ9 544 aa16.35■□□□□ 0.21
SNCAIP-204ENST00000395466 NCOA5Q9HCD5 579 aaKnown RBP16.35■□□□□ 0.21
SNCAIP-204ENST00000395466 GPHNQ9NQX3 736 aaPredicted RBP16.35■□□□□ 0.21
SNCAIP-204ENST00000395466 RTL9Q8NET4 1388 aa16.35■□□□□ 0.21
SNCAIP-204ENST00000395466 CASZ1Q86V15 1759 aa16.35■□□□□ 0.21
SNCAIP-204ENST00000395466 TCRBV5S4A2TA0A5A2 114 aa16.35■□□□□ 0.21
SNCAIP-204ENST00000395466 LIG1P18858 919 aa16.35■□□□□ 0.21
SNCAIP-204ENST00000395466 ANTXR2P58335 489 aa16.35■□□□□ 0.21
SNCAIP-204ENST00000395466 UBE3CQ15386 1083 aa16.35■□□□□ 0.21
SNCAIP-204ENST00000395466 PARP10Q53GL7 1025 aa16.35■□□□□ 0.21
SNCAIP-204ENST00000395466 GIMAP6Q6P9H5 292 aa16.35■□□□□ 0.21
SNCAIP-204ENST00000395466 HELBQ8NG08 1087 aaPredicted RBP16.35■□□□□ 0.21
SNCAIP-204ENST00000395466 NBPF3Q9H094 633 aa16.35■□□□□ 0.21
SNCAIP-204ENST00000395466 ZSCAN16Q9H4T2 348 aaPredicted RBP16.35■□□□□ 0.21
SNCAIP-204ENST00000395466 COL4A1P02462 1669 aa16.34■□□□□ 0.21
SNCAIP-204ENST00000395466 H3BQV1 296 aa16.34■□□□□ 0.21
SNCAIP-204ENST00000395466 NTSR2O95665 410 aa16.34■□□□□ 0.21
SNCAIP-204ENST00000395466 ADD1P35611 737 aaKnown RBP16.34■□□□□ 0.21
SNCAIP-204ENST00000395466 SLC9C2Q5TAH2 1124 aa16.34■□□□□ 0.21
SNCAIP-204ENST00000395466 IFFO2Q5TF58 517 aa16.34■□□□□ 0.21
SNCAIP-204ENST00000395466 SPATA32Q96LK8 384 aa16.34■□□□□ 0.21
SNCAIP-204ENST00000395466 SEC31BQ9NQW1 1179 aa16.34■□□□□ 0.21
SNCAIP-204ENST00000395466 A0A1B0GUL6 1792 aa16.34■□□□□ 0.21
SNCAIP-204ENST00000395466 CHD4Q14839 1912 aa16.34■□□□□ 0.21
SNCAIP-204ENST00000395466 C4AP0C0L4 1744 aa16.33■□□□□ 0.21
SNCAIP-204ENST00000395466 C4BP0C0L5 1744 aa16.33■□□□□ 0.21
SNCAIP-204ENST00000395466 A0A0G2JS52 829 aa16.33■□□□□ 0.21
SNCAIP-204ENST00000395466 PDE6AP16499 860 aa16.33■□□□□ 0.21
SNCAIP-204ENST00000395466 PGBD1Q96JS3 809 aa16.33■□□□□ 0.21
SNCAIP-204ENST00000395466 WWC3Q9ULE0 1092 aa16.33■□□□□ 0.21
SNCAIP-204ENST00000395466 NUTM2BA6NNL0 878 aaPredicted RBP16.33■□□□□ 0.2
SNCAIP-204ENST00000395466 NUTM2EB1AL46 878 aaPredicted RBP16.33■□□□□ 0.2
SNCAIP-204ENST00000395466 NUTM2AQ8IVF1 878 aaPredicted RBP16.33■□□□□ 0.2
SNCAIP-204ENST00000395466 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.33■□□□□ 0.2
SNCAIP-204ENST00000395466 WDR19Q8NEZ3 1342 aa16.33■□□□□ 0.2
SNCAIP-204ENST00000395466 ZNF532Q9HCE3 1301 aa16.33■□□□□ 0.2
SNCAIP-204ENST00000395466 FAM177BA6PVY3 158 aa16.32■□□□□ 0.2
SNCAIP-204ENST00000395466 SNAP23O00161 211 aa16.32■□□□□ 0.2
SNCAIP-204ENST00000395466 KCNQ2O43526 872 aa16.32■□□□□ 0.2
SNCAIP-204ENST00000395466 PRC1O43663 620 aa16.32■□□□□ 0.2
SNCAIP-204ENST00000395466 IDH1O75874 414 aaKnown RBP16.32■□□□□ 0.2
SNCAIP-204ENST00000395466 SLC5A1P13866 664 aa16.32■□□□□ 0.2
SNCAIP-204ENST00000395466 FDPSP14324 419 aaKnown RBP16.32■□□□□ 0.2
SNCAIP-204ENST00000395466 MCM5P33992 734 aa16.32■□□□□ 0.2
SNCAIP-204ENST00000395466 NCOA7Q8NI08 942 aa16.32■□□□□ 0.2
SNCAIP-204ENST00000395466 NOL7Q9UMY1 257 aaKnown RBP16.32■□□□□ 0.2
SNCAIP-204ENST00000395466 HPS5Q9UPZ3 1129 aa16.32■□□□□ 0.2
SNCAIP-204ENST00000395466 ZNF213O14771 459 aa16.31■□□□□ 0.2
SNCAIP-204ENST00000395466 NKX2-3Q8TAU0 364 aa16.31■□□□□ 0.2
SNCAIP-204ENST00000395466 SMARCC1Q92922 1105 aaPredicted RBP16.31■□□□□ 0.2
SNCAIP-204ENST00000395466 NIP7Q9Y221 180 aaKnown RBP eCLIP16.31■□□□□ 0.2
SNCAIP-204ENST00000395466 KIF3AQ9Y496 699 aa16.31■□□□□ 0.2
SNCAIP-204ENST00000395466 CARMIL3Q8ND23 1372 aa16.31■□□□□ 0.2
SNCAIP-204ENST00000395466 RASGRF1Q13972 1273 aa16.31■□□□□ 0.2
SNCAIP-204ENST00000395466 CCDC152Q4G0S7 254 aa16.31■□□□□ 0.2
SNCAIP-204ENST00000395466 SPATA5Q8NB90 893 aa16.31■□□□□ 0.2
SNCAIP-204ENST00000395466 CHMP4CQ96CF2 233 aa16.31■□□□□ 0.2
SNCAIP-204ENST00000395466 BCL9LQ86UU0 1499 aa16.31■□□□□ 0.2
SNCAIP-204ENST00000395466 TBC1D10CQ8IV04 446 aa16.3■□□□□ 0.2
SNCAIP-204ENST00000395466 STRBPQ96SI9 672 aaKnown RBP16.3■□□□□ 0.2
SNCAIP-204ENST00000395466 MPHOSPH8Q99549 860 aa16.3■□□□□ 0.2
SNCAIP-204ENST00000395466 NUP62CLQ9H1M0 184 aa16.3■□□□□ 0.2
SNCAIP-204ENST00000395466 DENND2AQ9ULE3 1009 aa16.3■□□□□ 0.2
SNCAIP-204ENST00000395466 NAP1L2Q9ULW6 460 aaPredicted RBP16.3■□□□□ 0.2
SNCAIP-204ENST00000395466 TAF1P21675 1872 aa16.3■□□□□ 0.2
SNCAIP-204ENST00000395466 FOSBP53539 338 aa16.29■□□□□ 0.2
SNCAIP-204ENST00000395466 RBM43Q6ZSC3 357 aaKnown RBP16.29■□□□□ 0.2
SNCAIP-204ENST00000395466 ILDR1Q86SU0 546 aaPredicted RBP16.29■□□□□ 0.2
SNCAIP-204ENST00000395466 DACT1Q9NYF0 836 aa16.29■□□□□ 0.2
SNCAIP-204ENST00000395466 KLF18A0A0U1RQI7 1052 aa16.29■□□□□ 0.2
SNCAIP-204ENST00000395466 ALX1Q15699 326 aa16.29■□□□□ 0.2
SNCAIP-204ENST00000395466 RALYLQ86SE5 291 aaKnown RBP16.29■□□□□ 0.2
SNCAIP-204ENST00000395466 DDX19AQ9NUU7 478 aaKnown RBP16.29■□□□□ 0.2
SNCAIP-204ENST00000395466 RCOR1Q9UKL0 485 aa16.29■□□□□ 0.2
SNCAIP-204ENST00000395466 CFAP45Q9UL16 551 aa16.29■□□□□ 0.2
SNCAIP-204ENST00000395466 ZMYM6O95789 1325 aa16.28■□□□□ 0.2
SNCAIP-204ENST00000395466 TIAM2Q8IVF5 1701 aa16.28■□□□□ 0.2
SNCAIP-204ENST00000395466 PPFIA3O75145 1194 aa16.28■□□□□ 0.2
SNCAIP-204ENST00000395466 MAP3K11Q16584 847 aa16.28■□□□□ 0.2
SNCAIP-204ENST00000395466 LINC00116Q8NCU8 138 aa16.28■□□□□ 0.2
SNCAIP-204ENST00000395466 CLSTN2Q9H4D0 955 aa16.28■□□□□ 0.2
SNCAIP-204ENST00000395466 CCDC39Q9UFE4 941 aa16.28■□□□□ 0.2
SNCAIP-204ENST00000395466 USP25Q9UHP3 1055 aa16.28■□□□□ 0.2
SNCAIP-204ENST00000395466 SCN7AQ01118 1682 aa16.27■□□□□ 0.2
SNCAIP-204ENST00000395466 GOLGA6L4A6NEF3 574 aa16.27■□□□□ 0.2
SNCAIP-204ENST00000395466 CYB5R4Q7L1T6 521 aa16.27■□□□□ 0.2
SNCAIP-204ENST00000395466 EPB41L4AQ9HCS5 686 aaPredicted RBP16.27■□□□□ 0.2
SNCAIP-204ENST00000395466 ZKSCAN5Q9Y2L8 839 aa16.27■□□□□ 0.2
SNCAIP-204ENST00000395466 ECM29Q5VYK3 1845 aa16.27■□□□□ 0.19
SNCAIP-204ENST00000395466 GOLGA8BA8MQT2 603 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms