RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 ADORA1P30542 326 aa23.23■■□□□ 1.31
LMNB1-202ENST00000395354 C15orf52Q6ZUT6 534 aaKnown RBP23.23■■□□□ 1.31
LMNB1-202ENST00000395354 LSG1Q9H089 658 aaKnown RBP23.23■■□□□ 1.31
LMNB1-202ENST00000395354 IL25Q9H293 177 aa23.23■■□□□ 1.31
LMNB1-202ENST00000395354 FER1L6Q2WGJ9 1857 aa23.22■■□□□ 1.31
LMNB1-202ENST00000395354 HSPA4P34932 840 aa23.22■■□□□ 1.31
LMNB1-202ENST00000395354 GORABQ5T7V8 394 aa23.22■■□□□ 1.31
LMNB1-202ENST00000395354 FAM84BQ96KN1 310 aaPredicted RBP23.22■■□□□ 1.31
LMNB1-202ENST00000395354 ZNF277Q9NRM2 450 aaPredicted RBP23.22■■□□□ 1.31
LMNB1-202ENST00000395354 IRS2Q9Y4H2 1338 aa23.21■■□□□ 1.31
LMNB1-202ENST00000395354 K7ELQ4 463 aaPredicted RBP23.21■■□□□ 1.31
LMNB1-202ENST00000395354 GYG1P46976 350 aa23.21■■□□□ 1.31
LMNB1-202ENST00000395354 CAVIN4Q5BKX8 364 aa23.21■■□□□ 1.31
LMNB1-202ENST00000395354 LTBP3Q9NS15 1303 aa23.21■■□□□ 1.31
LMNB1-202ENST00000395354 MED23Q9ULK4 1368 aa23.2■■□□□ 1.3
LMNB1-202ENST00000395354 ST18O60284 1047 aa23.2■■□□□ 1.3
LMNB1-202ENST00000395354 GRIN3BO60391 1043 aa23.2■■□□□ 1.3
LMNB1-202ENST00000395354 CCDC158Q5M9N0 1113 aa23.2■■□□□ 1.3
LMNB1-202ENST00000395354 VPS33BQ9H267 617 aa23.2■■□□□ 1.3
LMNB1-202ENST00000395354 ANTXR1Q9H6X2 564 aa23.2■■□□□ 1.3
LMNB1-202ENST00000395354 PPIP5K2O43314 1243 aa23.19■■□□□ 1.3
LMNB1-202ENST00000395354 HIBADHP31937 336 aaKnown RBP23.19■■□□□ 1.3
LMNB1-202ENST00000395354 BCAMP50895 628 aa23.19■■□□□ 1.3
LMNB1-202ENST00000395354 RASSF7Q02833 373 aa23.19■■□□□ 1.3
LMNB1-202ENST00000395354 KIAA2012Q0VF49 1180 aa23.19■■□□□ 1.3
LMNB1-202ENST00000395354 AOC3Q16853 763 aa23.19■■□□□ 1.3
LMNB1-202ENST00000395354 VPS37DQ86XT2 251 aa23.19■■□□□ 1.3
LMNB1-202ENST00000395354 NMIQ13287 307 aaPredicted RBP23.18■■□□□ 1.3
LMNB1-202ENST00000395354 FBXO33Q7Z6M2 555 aa23.18■■□□□ 1.3
LMNB1-202ENST00000395354 KBTBD3Q8NAB2 608 aa23.18■■□□□ 1.3
LMNB1-202ENST00000395354 G3V3G9 751 aa23.18■■□□□ 1.3
LMNB1-202ENST00000395354 IARSP41252 1262 aaKnown RBP23.18■■□□□ 1.3
LMNB1-202ENST00000395354 DCAF8Q5TAQ9 597 aa23.18■■□□□ 1.3
LMNB1-202ENST00000395354 CCDC102BQ68D86 513 aa23.18■■□□□ 1.3
LMNB1-202ENST00000395354 ZNF804AQ7Z570 1209 aa23.18■■□□□ 1.3
LMNB1-202ENST00000395354 DOK7Q18PE1 504 aa23.17■■□□□ 1.3
LMNB1-202ENST00000395354 LARGE2Q8N3Y3 721 aa23.17■■□□□ 1.3
LMNB1-202ENST00000395354 ZNF512BQ96KM6 892 aaPredicted RBP23.17■■□□□ 1.3
LMNB1-202ENST00000395354 DNAJC2Q99543 621 aaKnown RBP23.17■■□□□ 1.3
LMNB1-202ENST00000395354 PAG1Q9NWQ8 432 aa23.17■■□□□ 1.3
LMNB1-202ENST00000395354 CD2BP2O95400 341 aaKnown RBP23.16■■□□□ 1.3
LMNB1-202ENST00000395354 PHKA1P46020 1223 aa23.16■■□□□ 1.3
LMNB1-202ENST00000395354 MCM2P49736 904 aa23.16■■□□□ 1.3
LMNB1-202ENST00000395354 TTC39AQ5SRH9 613 aa23.15■■□□□ 1.3
LMNB1-202ENST00000395354 FAM227BQ96M60 508 aa23.15■■□□□ 1.3
LMNB1-202ENST00000395354 COA1Q9GZY4 146 aa23.15■■□□□ 1.3
LMNB1-202ENST00000395354 CD209Q9NNX6 404 aa23.15■■□□□ 1.3
LMNB1-202ENST00000395354 GNL3LQ9NVN8 582 aaKnown RBP23.15■■□□□ 1.3
LMNB1-202ENST00000395354 DCAF8L1A6NGE4 600 aa23.14■■□□□ 1.3
LMNB1-202ENST00000395354 PRELPP51888 382 aa23.14■■□□□ 1.3
LMNB1-202ENST00000395354 KCNB2Q92953 911 aa23.14■■□□□ 1.3
LMNB1-202ENST00000395354 PALD1Q9ULE6 856 aa23.14■■□□□ 1.3
LMNB1-202ENST00000395354 ARAP2Q8WZ64 1704 aa23.14■■□□□ 1.3
LMNB1-202ENST00000395354 CCDC171Q6TFL3 1326 aa23.14■■□□□ 1.3
LMNB1-202ENST00000395354 LRRFIP1Q32MZ4 808 aaKnown RBP23.14■■□□□ 1.29
LMNB1-202ENST00000395354 EDC3Q96F86 508 aaKnown RBP23.14■■□□□ 1.29
LMNB1-202ENST00000395354 SLKQ9H2G2 1235 aaPredicted RBP23.14■■□□□ 1.29
LMNB1-202ENST00000395354 DBNDD1Q9H9R9 158 aa23.14■■□□□ 1.29
LMNB1-202ENST00000395354 A0A0D9SFI3 127 aa23.13■■□□□ 1.29
LMNB1-202ENST00000395354 UQCRFS1P1P0C7P4 283 aa23.13■■□□□ 1.29
LMNB1-202ENST00000395354 LMNB1P20700 586 aa23.13■■□□□ 1.29
LMNB1-202ENST00000395354 TDRD7Q8NHU6 1098 aaKnown RBP23.13■■□□□ 1.29
LMNB1-202ENST00000395354 JDP2Q8WYK2 163 aa23.13■■□□□ 1.29
LMNB1-202ENST00000395354 MAP4K1Q92918 833 aa23.13■■□□□ 1.29
LMNB1-202ENST00000395354 IQSEC3Q9UPP2 1182 aaPredicted RBP23.13■■□□□ 1.29
LMNB1-202ENST00000395354 GOLIM4O00461 696 aa23.12■■□□□ 1.29
LMNB1-202ENST00000395354 FRAT2O75474 233 aaPredicted RBP23.12■■□□□ 1.29
LMNB1-202ENST00000395354 IL1R1P14778 569 aa23.12■■□□□ 1.29
LMNB1-202ENST00000395354 PODNQ7Z5L7 613 aa23.12■■□□□ 1.29
LMNB1-202ENST00000395354 CHMP5Q9NZZ3 219 aa23.12■■□□□ 1.29
LMNB1-202ENST00000395354 ECE2O60344 883 aa23.11■■□□□ 1.29
LMNB1-202ENST00000395354 PTH1RQ03431 593 aa23.11■■□□□ 1.29
LMNB1-202ENST00000395354 NIM1KQ8IY84 436 aa23.11■■□□□ 1.29
LMNB1-202ENST00000395354 CIZ1Q9ULV3 898 aaPredicted RBP23.11■■□□□ 1.29
LMNB1-202ENST00000395354 CCDC88AQ3V6T2 1871 aa23.11■■□□□ 1.29
LMNB1-202ENST00000395354 ARID4AP29374 1257 aaPredicted RBP23.1■■□□□ 1.29
LMNB1-202ENST00000395354 DDIT3P35638 169 aa23.1■■□□□ 1.29
LMNB1-202ENST00000395354 NEK4P51957 841 aa23.1■■□□□ 1.29
LMNB1-202ENST00000395354 MCMDC2Q4G0Z9 681 aa23.1■■□□□ 1.29
LMNB1-202ENST00000395354 HELLSQ9NRZ9 838 aa23.1■■□□□ 1.29
LMNB1-202ENST00000395354 SNX14Q9Y5W7 946 aa23.1■■□□□ 1.29
LMNB1-202ENST00000395354 UTRNP46939 3433 aa23.1■■□□□ 1.29
LMNB1-202ENST00000395354 NECTIN1Q15223 517 aa23.1■■□□□ 1.29
LMNB1-202ENST00000395354 ZNRF3Q9ULT6 936 aa23.1■■□□□ 1.29
LMNB1-202ENST00000395354 NDUFB9Q9Y6M9 179 aa23.1■■□□□ 1.29
LMNB1-202ENST00000395354 SBF1O95248 1867 aa23.09■■□□□ 1.29
LMNB1-202ENST00000395354 SEMA3EO15041 775 aa23.09■■□□□ 1.29
LMNB1-202ENST00000395354 RASGRF1Q13972 1273 aa23.09■■□□□ 1.29
LMNB1-202ENST00000395354 SCARF1Q14162 830 aa23.09■■□□□ 1.29
LMNB1-202ENST00000395354 HSP90AA1P07900 732 aaKnown RBP23.08■■□□□ 1.29
LMNB1-202ENST00000395354 ZFYP08048 801 aaPredicted RBP23.08■■□□□ 1.29
LMNB1-202ENST00000395354 MCAMP43121 646 aa23.08■■□□□ 1.29
LMNB1-202ENST00000395354 SPATA5Q8NB90 893 aa23.08■■□□□ 1.29
LMNB1-202ENST00000395354 TM6SF1Q9BZW5 370 aa23.08■■□□□ 1.29
LMNB1-202ENST00000395354 KCNQ5Q9NR82 932 aa23.08■■□□□ 1.29
LMNB1-202ENST00000395354 HMG20BQ9P0W2 317 aa23.08■■□□□ 1.29
LMNB1-202ENST00000395354 DENND2AQ9ULE3 1009 aa23.08■■□□□ 1.29
LMNB1-202ENST00000395354 COL4A5P29400 1685 aa23.08■■□□□ 1.28
LMNB1-202ENST00000395354 CHD4Q14839 1912 aa23.07■■□□□ 1.28
LMNB1-202ENST00000395354 ZBTB22O15209 634 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms