RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 CTNNA3Q9UI47 895 aa16.95■□□□□ 0.3
CDC42SE2-202ENST00000395246 FSD2A1L4K1 749 aa16.95■□□□□ 0.3
CDC42SE2-202ENST00000395246 PHKA1P46020 1223 aa16.95■□□□□ 0.3
CDC42SE2-202ENST00000395246 RASGRF1Q13972 1273 aa16.95■□□□□ 0.3
CDC42SE2-202ENST00000395246 RCAN1P53805 252 aa16.95■□□□□ 0.3
CDC42SE2-202ENST00000395246 MB21D2Q8IYB1 491 aaPredicted RBP16.95■□□□□ 0.3
CDC42SE2-202ENST00000395246 ZNF274Q96GC6 653 aaPredicted RBP16.95■□□□□ 0.3
CDC42SE2-202ENST00000395246 CRAMP1Q96RY5 1269 aa16.95■□□□□ 0.3
CDC42SE2-202ENST00000395246 TAF6LQ9Y6J9 622 aa16.95■□□□□ 0.3
CDC42SE2-202ENST00000395246 NFIXQ14938 502 aa16.94■□□□□ 0.3
CDC42SE2-202ENST00000395246 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.94■□□□□ 0.3
CDC42SE2-202ENST00000395246 POLRMTO00411 1230 aaKnown RBP16.94■□□□□ 0.3
CDC42SE2-202ENST00000395246 GNAT2P19087 354 aa16.94■□□□□ 0.3
CDC42SE2-202ENST00000395246 CASTP20810 708 aaKnown RBP16.94■□□□□ 0.3
CDC42SE2-202ENST00000395246 ANKRD18AQ8IVF6 992 aa16.94■□□□□ 0.3
CDC42SE2-202ENST00000395246 ZGPATQ8N5A5 531 aaKnown RBP16.94■□□□□ 0.3
CDC42SE2-202ENST00000395246 CHMP3Q9Y3E7 222 aa16.94■□□□□ 0.3
CDC42SE2-202ENST00000395246 ROBO3Q96MS0 1386 aa16.94■□□□□ 0.3
CDC42SE2-202ENST00000395246 GRAPQ13588 217 aa16.94■□□□□ 0.3
CDC42SE2-202ENST00000395246 GRAPLQ8TC17 118 aaPredicted RBP16.94■□□□□ 0.3
CDC42SE2-202ENST00000395246 GBP4Q96PP9 640 aa16.94■□□□□ 0.3
CDC42SE2-202ENST00000395246 STRBPQ96SI9 672 aaKnown RBP16.94■□□□□ 0.3
CDC42SE2-202ENST00000395246 SEC62Q99442 399 aaKnown RBP16.94■□□□□ 0.3
CDC42SE2-202ENST00000395246 PFKFB2O60825 505 aa16.93■□□□□ 0.3
CDC42SE2-202ENST00000395246 BAG4O95429 457 aaKnown RBP16.93■□□□□ 0.3
CDC42SE2-202ENST00000395246 FLAD1Q8NFF5 587 aa16.93■□□□□ 0.3
CDC42SE2-202ENST00000395246 NEUROD6Q96NK8 337 aa16.93■□□□□ 0.3
CDC42SE2-202ENST00000395246 NEK1Q96PY6 1258 aa16.93■□□□□ 0.3
CDC42SE2-202ENST00000395246 LEMD3Q9Y2U8 911 aa16.93■□□□□ 0.3
CDC42SE2-202ENST00000395246 ZPR1O75312 459 aa16.93■□□□□ 0.3
CDC42SE2-202ENST00000395246 DHX32Q7L7V1 743 aaKnown RBP16.93■□□□□ 0.3
CDC42SE2-202ENST00000395246 PUS7LQ9H0K6 701 aaKnown RBP16.93■□□□□ 0.3
CDC42SE2-202ENST00000395246 TPCN1Q9ULQ1 816 aa16.93■□□□□ 0.3
CDC42SE2-202ENST00000395246 ME3Q16798 604 aa16.93■□□□□ 0.3
CDC42SE2-202ENST00000395246 TAF7LQ5H9L4 462 aa16.93■□□□□ 0.3
CDC42SE2-202ENST00000395246 SLKQ9H2G2 1235 aaPredicted RBP16.93■□□□□ 0.3
CDC42SE2-202ENST00000395246 PDE6AP16499 860 aa16.92■□□□□ 0.3
CDC42SE2-202ENST00000395246 DNAJC2Q99543 621 aaKnown RBP16.92■□□□□ 0.3
CDC42SE2-202ENST00000395246 SRP68Q9UHB9 627 aaKnown RBP16.92■□□□□ 0.3
CDC42SE2-202ENST00000395246 CHMP4CQ96CF2 233 aa16.92■□□□□ 0.3
CDC42SE2-202ENST00000395246 FAM84BQ96KN1 310 aaPredicted RBP16.92■□□□□ 0.3
CDC42SE2-202ENST00000395246 JAKMIP1Q96N16 626 aaKnown RBP16.92■□□□□ 0.3
CDC42SE2-202ENST00000395246 E7EWF7 191 aa16.91■□□□□ 0.3
CDC42SE2-202ENST00000395246 PCP11498 1178 aaKnown RBP16.91■□□□□ 0.3
CDC42SE2-202ENST00000395246 COL9A3Q14050 684 aaPredicted RBP16.91■□□□□ 0.3
CDC42SE2-202ENST00000395246 PRR5LQ6MZQ0 368 aa16.91■□□□□ 0.3
CDC42SE2-202ENST00000395246 GTF3C6Q969F1 213 aa16.91■□□□□ 0.3
CDC42SE2-202ENST00000395246 NLRP3Q96P20 1036 aa16.91■□□□□ 0.3
CDC42SE2-202ENST00000395246 RPS8P62241 208 aaKnown RBP16.91■□□□□ 0.3
CDC42SE2-202ENST00000395246 RGS17Q9UGC6 210 aaPredicted RBP16.91■□□□□ 0.3
CDC42SE2-202ENST00000395246 CHGBP05060 677 aa16.91■□□□□ 0.3
CDC42SE2-202ENST00000395246 BLOC1S2Q6QNY1 142 aa16.91■□□□□ 0.3
CDC42SE2-202ENST00000395246 MPHOSPH8Q99549 860 aa16.91■□□□□ 0.3
CDC42SE2-202ENST00000395246 LMBRD1Q9NUN5 540 aa16.91■□□□□ 0.3
CDC42SE2-202ENST00000395246 DENND2AQ9ULE3 1009 aa16.91■□□□□ 0.3
CDC42SE2-202ENST00000395246 LARGE1O95461 756 aa16.9■□□□□ 0.3
CDC42SE2-202ENST00000395246 IL1R1P14778 569 aa16.9■□□□□ 0.3
CDC42SE2-202ENST00000395246 CELF1Q92879 486 aaKnown RBP16.9■□□□□ 0.3
CDC42SE2-202ENST00000395246 RIOK1Q9BRS2 568 aaKnown RBP16.9■□□□□ 0.3
CDC42SE2-202ENST00000395246 PATL2C9JE40 543 aaKnown RBP16.9■□□□□ 0.3
CDC42SE2-202ENST00000395246 KLHL40Q2TBA0 621 aa16.9■□□□□ 0.3
CDC42SE2-202ENST00000395246 WDR33Q9C0J8 1336 aaKnown RBP16.89■□□□□ 0.3
CDC42SE2-202ENST00000395246 ZNF384Q8TF68 577 aa16.89■□□□□ 0.29
CDC42SE2-202ENST00000395246 MYH2Q9UKX2 1941 aa16.89■□□□□ 0.29
CDC42SE2-202ENST00000395246 SIPA1L1O43166 1804 aa16.89■□□□□ 0.29
CDC42SE2-202ENST00000395246 GPAA1O43292 621 aa16.89■□□□□ 0.29
CDC42SE2-202ENST00000395246 TXNRD1Q16881 649 aa16.89■□□□□ 0.29
CDC42SE2-202ENST00000395246 AEBP2Q6ZN18 517 aaPredicted RBP16.89■□□□□ 0.29
CDC42SE2-202ENST00000395246 FGAP02671 866 aa16.89■□□□□ 0.29
CDC42SE2-202ENST00000395246 CCDC129Q6ZRS4 1044 aa16.89■□□□□ 0.29
CDC42SE2-202ENST00000395246 TAOK2Q9UL54 1235 aa16.89■□□□□ 0.29
CDC42SE2-202ENST00000395246 NDUFB9Q9Y6M9 179 aa16.89■□□□□ 0.29
CDC42SE2-202ENST00000395246 TCHHQ07283 1943 aa16.88■□□□□ 0.29
CDC42SE2-202ENST00000395246 SGMS1Q86VZ5 419 aa16.88■□□□□ 0.29
CDC42SE2-202ENST00000395246 BRIP1Q9BX63 1249 aa16.88■□□□□ 0.29
CDC42SE2-202ENST00000395246 UPF3BQ9BZI7 483 aaKnown RBP16.88■□□□□ 0.29
CDC42SE2-202ENST00000395246 TDRD7Q8NHU6 1098 aaKnown RBP16.88■□□□□ 0.29
CDC42SE2-202ENST00000395246 STAG1Q8WVM7 1258 aa16.88■□□□□ 0.29
CDC42SE2-202ENST00000395246 MORC2Q9Y6X9 1032 aaPredicted RBP16.88■□□□□ 0.29
CDC42SE2-202ENST00000395246 MKRN1Q9UHC7 482 aaKnown RBP16.87■□□□□ 0.29
CDC42SE2-202ENST00000395246 ZNF532Q9HCE3 1301 aa16.87■□□□□ 0.29
CDC42SE2-202ENST00000395246 RFC4P35249 363 aa16.87■□□□□ 0.29
CDC42SE2-202ENST00000395246 DDR1Q08345 913 aa16.87■□□□□ 0.29
CDC42SE2-202ENST00000395246 GSE1Q14687 1217 aa16.87■□□□□ 0.29
CDC42SE2-202ENST00000395246 NBPF5PQ86XG9 351 aaPredicted RBP16.87■□□□□ 0.29
CDC42SE2-202ENST00000395246 ELP1O95163 1332 aa16.87■□□□□ 0.29
CDC42SE2-202ENST00000395246 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.87■□□□□ 0.29
CDC42SE2-202ENST00000395246 PKP1Q13835 747 aa16.87■□□□□ 0.29
CDC42SE2-202ENST00000395246 CERS3Q8IU89 383 aa16.87■□□□□ 0.29
CDC42SE2-202ENST00000395246 EPB41L4AQ9HCS5 686 aaPredicted RBP16.87■□□□□ 0.29
CDC42SE2-202ENST00000395246 BBOX1O75936 387 aa16.86■□□□□ 0.29
CDC42SE2-202ENST00000395246 ANTXR2P58335 489 aa16.86■□□□□ 0.29
CDC42SE2-202ENST00000395246 WWC3Q9ULE0 1092 aa16.86■□□□□ 0.29
CDC42SE2-202ENST00000395246 GSG1L2A8MUP6 293 aa16.86■□□□□ 0.29
CDC42SE2-202ENST00000395246 MAP3K12Q12852 859 aa16.86■□□□□ 0.29
CDC42SE2-202ENST00000395246 FAM163AQ96GL9 167 aaPredicted RBP16.86■□□□□ 0.29
CDC42SE2-202ENST00000395246 ZNF330Q9Y3S2 320 aaPredicted RBP16.86■□□□□ 0.29
CDC42SE2-202ENST00000395246 XDHP47989 1333 aa16.86■□□□□ 0.29
CDC42SE2-202ENST00000395246 MTMR6Q9Y217 621 aa16.86■□□□□ 0.29
CDC42SE2-202ENST00000395246 FAM205AQ6ZU69 1335 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms