RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 CUL7Q14999 1698 aa14.33□□□□□ -0.12
SLC28A1-203ENST00000394573 ZMYND10O75800 440 aa14.33□□□□□ -0.12
SLC28A1-203ENST00000394573 CSB-PGBD3P0DP91 1061 aa14.33□□□□□ -0.12
SLC28A1-203ENST00000394573 AKAP17AQ02040 695 aaKnown RBP14.33□□□□□ -0.12
SLC28A1-203ENST00000394573 XAGE2Q96GT9 111 aa14.33□□□□□ -0.12
SLC28A1-203ENST00000394573 ZCWPW1Q9H0M4 648 aa14.33□□□□□ -0.12
SLC28A1-203ENST00000394573 NDUFAB1O14561 156 aa14.32□□□□□ -0.12
SLC28A1-203ENST00000394573 CCDC181Q5TID7 509 aa14.32□□□□□ -0.12
SLC28A1-203ENST00000394573 CADPS2Q86UW7 1296 aa14.32□□□□□ -0.12
SLC28A1-203ENST00000394573 NOA1Q8NC60 698 aaKnown RBP14.32□□□□□ -0.12
SLC28A1-203ENST00000394573 FAM76AQ8TAV0 307 aa14.32□□□□□ -0.12
SLC28A1-203ENST00000394573 LMBR1Q8WVP7 490 aa14.32□□□□□ -0.12
SLC28A1-203ENST00000394573 OSBPL3Q9H4L5 887 aa14.32□□□□□ -0.12
SLC28A1-203ENST00000394573 PRDM16Q9HAZ2 1276 aa14.32□□□□□ -0.12
SLC28A1-203ENST00000394573 ADCY9O60503 1353 aa14.32□□□□□ -0.12
SLC28A1-203ENST00000394573 HMMRO75330 724 aa14.32□□□□□ -0.12
SLC28A1-203ENST00000394573 KLHL23Q8NBE8 558 aa14.32□□□□□ -0.12
SLC28A1-203ENST00000394573 YIPF3Q9GZM5 350 aa14.32□□□□□ -0.12
SLC28A1-203ENST00000394573 IL1RAPL2Q9NP60 686 aa14.32□□□□□ -0.12
SLC28A1-203ENST00000394573 RTEL1Q9NZ71 1219 aa14.32□□□□□ -0.12
SLC28A1-203ENST00000394573 URB2Q14146 1524 aaKnown RBP14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 UPP2O95045 317 aa14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 FAM163BP0C2L3 166 aa14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 FANCCQ00597 558 aa14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 ACCSLQ4AC99 568 aa14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 CCDC40Q4G0X9 1142 aa14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 FAM228AQ86W67 206 aa14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 AMOTL1Q8IY63 956 aa14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 RPUSD2Q8IZ73 545 aaKnown RBP14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 CAPS2Q9BXY5 557 aa14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 MBIPQ9NS73 344 aa14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 PDS5BQ9NTI5 1447 aa14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 TOPBP1Q92547 1522 aa14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 ADGRB2O60241 1585 aa14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 GOLGA6CA6NDK9 693 aa14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 EIF4E1BA6NMX2 242 aaKnown RBP14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 PPFIA3O75145 1194 aa14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 GOLGA6DP0CG33 693 aa14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 PECAM1P16284 738 aaPredicted RBP14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 RAB27AP51159 221 aa14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 MTF1Q14872 753 aa14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 CFAP100Q494V2 611 aa14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 PRPF40BQ6NWY9 871 aaKnown RBP14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 MSANTD4Q8NCY6 345 aa14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 SAAL1Q96ER3 474 aa14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 SDF4Q9BRK5 362 aa14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 LRRCC1Q9C099 1032 aa14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 MRPL44Q9H9J2 332 aaKnown RBP14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 SLC40A1Q9NP59 571 aa14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 GOLGA6AQ9NYA3 693 aa14.31□□□□□ -0.12
SLC28A1-203ENST00000394573 EZRP15311 586 aaKnown RBP14.3□□□□□ -0.12
SLC28A1-203ENST00000394573 CDR1P51861 262 aa14.3□□□□□ -0.12
SLC28A1-203ENST00000394573 NUTM1Q86Y26 1132 aa14.3□□□□□ -0.12
SLC28A1-203ENST00000394573 SHANK2Q9UPX8 1470 aa14.3□□□□□ -0.12
SLC28A1-203ENST00000394573 COQ9O75208 318 aa14.3□□□□□ -0.12
SLC28A1-203ENST00000394573 FSBPO95073 299 aa14.3□□□□□ -0.12
SLC28A1-203ENST00000394573 ADKP55263 362 aaKnown RBP14.3□□□□□ -0.12
SLC28A1-203ENST00000394573 SLC4A10Q6U841 1118 aa14.3□□□□□ -0.12
SLC28A1-203ENST00000394573 CCDC73Q6ZRK6 1079 aa14.3□□□□□ -0.12
SLC28A1-203ENST00000394573 TBC1D31Q96DN5 1066 aa14.3□□□□□ -0.12
SLC28A1-203ENST00000394573 FANCLQ9NW38 375 aa14.3□□□□□ -0.12
SLC28A1-203ENST00000394573 IQGAP1P46940 1657 aa14.3□□□□□ -0.12
SLC28A1-203ENST00000394573 GRIN2DO15399 1336 aa14.29□□□□□ -0.12
SLC28A1-203ENST00000394573 SHOX2O60902 331 aaPredicted RBP14.29□□□□□ -0.12
SLC28A1-203ENST00000394573 KIF4AO95239 1232 aa14.29□□□□□ -0.12
SLC28A1-203ENST00000394573 SERPINC1P01008 464 aa14.29□□□□□ -0.12
SLC28A1-203ENST00000394573 SF3A1Q15459 793 aaKnown RBP14.29□□□□□ -0.12
SLC28A1-203ENST00000394573 KIF4BQ2VIQ3 1234 aa14.29□□□□□ -0.12
SLC28A1-203ENST00000394573 CCDC13Q8IYE1 715 aa14.29□□□□□ -0.12
SLC28A1-203ENST00000394573 TMEM165Q9HC07 324 aa14.29□□□□□ -0.12
SLC28A1-203ENST00000394573 LMCD1Q9NZU5 365 aa14.29□□□□□ -0.12
SLC28A1-203ENST00000394573 DNMBPQ6XZF7 1577 aa14.29□□□□□ -0.12
SLC28A1-203ENST00000394573 EIF3HO15372 352 aaKnown RBP eCLIP14.29□□□□□ -0.12
SLC28A1-203ENST00000394573 MEFVO15553 781 aaPredicted RBP14.29□□□□□ -0.12
SLC28A1-203ENST00000394573 RANBP1P43487 201 aa14.29□□□□□ -0.12
SLC28A1-203ENST00000394573 PDCLQ13371 301 aa14.29□□□□□ -0.12
SLC28A1-203ENST00000394573 SNCBQ16143 134 aa14.29□□□□□ -0.12
SLC28A1-203ENST00000394573 HPCAL4Q9UM19 191 aa14.29□□□□□ -0.12
SLC28A1-203ENST00000394573 CROCC2H7BZ55 1655 aa14.29□□□□□ -0.12
SLC28A1-203ENST00000394573 MYOM2P54296 1465 aa14.29□□□□□ -0.12
SLC28A1-203ENST00000394573 MYO1BO43795 1136 aa14.28□□□□□ -0.12
SLC28A1-203ENST00000394573 ZEB2O60315 1214 aa14.28□□□□□ -0.12
SLC28A1-203ENST00000394573 JAK2O60674 1132 aa14.28□□□□□ -0.12
SLC28A1-203ENST00000394573 UBASH3AP57075 661 aa14.28□□□□□ -0.12
SLC28A1-203ENST00000394573 MTX1Q13505 466 aa14.28□□□□□ -0.12
SLC28A1-203ENST00000394573 TLDC1Q6P9B6 456 aa14.28□□□□□ -0.12
SLC28A1-203ENST00000394573 OPLAHO14841 1288 aa14.28□□□□□ -0.12
SLC28A1-203ENST00000394573 FSIP1Q8NA03 581 aa14.28□□□□□ -0.12
SLC28A1-203ENST00000394573 LSG1Q9H089 658 aaKnown RBP14.28□□□□□ -0.12
SLC28A1-203ENST00000394573 SIL1Q9H173 461 aa14.28□□□□□ -0.12
SLC28A1-203ENST00000394573 GGNBP2Q9H3C7 697 aa14.28□□□□□ -0.12
SLC28A1-203ENST00000394573 FBXO3Q9UK99 471 aa14.28□□□□□ -0.12
SLC28A1-203ENST00000394573 ANKRD18BA2A2Z9 1011 aa14.28□□□□□ -0.12
SLC28A1-203ENST00000394573 TMCO5BA8MYB1 307 aa14.28□□□□□ -0.12
SLC28A1-203ENST00000394573 TOP1P11387 765 aaKnown RBP14.28□□□□□ -0.12
SLC28A1-203ENST00000394573 SF3B2Q13435 895 aaKnown RBP14.28□□□□□ -0.12
SLC28A1-203ENST00000394573 STIM1Q13586 685 aa14.28□□□□□ -0.12
SLC28A1-203ENST00000394573 CDCA2Q69YH5 1023 aaPredicted RBP14.28□□□□□ -0.12
SLC28A1-203ENST00000394573 TMEM139Q8IV31 216 aa14.28□□□□□ -0.12
SLC28A1-203ENST00000394573 PPP6R1Q9UPN7 881 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms