RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 ARID5BQ14865 1188 aa15.85■□□□□ 0.13
GTF2F1-201ENST00000394456 BCL11BQ9C0K0 894 aaPredicted RBP15.85■□□□□ 0.13
GTF2F1-201ENST00000394456 CEP126Q9P2H0 1117 aa15.85■□□□□ 0.13
GTF2F1-201ENST00000394456 MYH3P11055 1940 aa15.85■□□□□ 0.13
GTF2F1-201ENST00000394456 RNF113AO15541 343 aaKnown RBP15.85■□□□□ 0.13
GTF2F1-201ENST00000394456 IFIT5Q13325 482 aaKnown RBP15.85■□□□□ 0.13
GTF2F1-201ENST00000394456 SPTLC3Q9NUV7 552 aa15.85■□□□□ 0.13
GTF2F1-201ENST00000394456 SPATA31A5Q5VU36 1347 aa15.84■□□□□ 0.13
GTF2F1-201ENST00000394456 SPATA31A7Q8IWB4 1347 aa15.84■□□□□ 0.13
GTF2F1-201ENST00000394456 CIAO1O76071 339 aa15.84■□□□□ 0.13
GTF2F1-201ENST00000394456 WASHC4Q2M389 1173 aa15.84■□□□□ 0.13
GTF2F1-201ENST00000394456 ZNF710Q8N1W2 664 aa15.84■□□□□ 0.13
GTF2F1-201ENST00000394456 CDCA7Q9BWT1 371 aaPredicted RBP15.84■□□□□ 0.13
GTF2F1-201ENST00000394456 GREM2Q9H772 168 aa15.84■□□□□ 0.13
GTF2F1-201ENST00000394456 TRMT112Q9UI30 125 aaKnown RBP15.84■□□□□ 0.13
GTF2F1-201ENST00000394456 ATP6V1AP38606 617 aa15.84■□□□□ 0.13
GTF2F1-201ENST00000394456 ZAP70P43403 619 aa15.84■□□□□ 0.13
GTF2F1-201ENST00000394456 ZNF165P49910 485 aa15.84■□□□□ 0.13
GTF2F1-201ENST00000394456 CCDC144BQ3MJ40 725 aa15.84■□□□□ 0.13
GTF2F1-201ENST00000394456 RBM43Q6ZSC3 357 aaKnown RBP15.84■□□□□ 0.13
GTF2F1-201ENST00000394456 CCAR1Q8IX12 1150 aaKnown RBP15.84■□□□□ 0.13
GTF2F1-201ENST00000394456 CCDC144CPQ8IYA2 1237 aa15.84■□□□□ 0.13
GTF2F1-201ENST00000394456 MYRIPQ8NFW9 859 aa15.84■□□□□ 0.13
GTF2F1-201ENST00000394456 TRIM5Q9C035 493 aa15.84■□□□□ 0.13
GTF2F1-201ENST00000394456 GPR108Q9NPR9 543 aa15.84■□□□□ 0.13
GTF2F1-201ENST00000394456 HELLSQ9NRZ9 838 aa15.84■□□□□ 0.13
GTF2F1-201ENST00000394456 DDX19AQ9NUU7 478 aaKnown RBP15.84■□□□□ 0.13
GTF2F1-201ENST00000394456 LAMA4Q16363 1823 aa15.84■□□□□ 0.13
GTF2F1-201ENST00000394456 DRC7Q8IY82 874 aa15.83■□□□□ 0.13
GTF2F1-201ENST00000394456 XAGE2Q96GT9 111 aa15.83■□□□□ 0.13
GTF2F1-201ENST00000394456 PUS7LQ9H0K6 701 aaKnown RBP15.83■□□□□ 0.13
GTF2F1-201ENST00000394456 THRAP3Q9Y2W1 955 aaKnown RBP15.83■□□□□ 0.13
GTF2F1-201ENST00000394456 MYH14Q7Z406 1995 aaKnown RBP15.83■□□□□ 0.12
GTF2F1-201ENST00000394456 UBN2Q6ZU65 1347 aa15.83■□□□□ 0.12
GTF2F1-201ENST00000394456 IRS4O14654 1257 aaPredicted RBP15.83■□□□□ 0.12
GTF2F1-201ENST00000394456 CSF1RP07333 972 aa15.83■□□□□ 0.12
GTF2F1-201ENST00000394456 IL6STP40189 918 aaPredicted RBP15.83■□□□□ 0.12
GTF2F1-201ENST00000394456 DSCC1Q9BVC3 393 aa15.83■□□□□ 0.12
GTF2F1-201ENST00000394456 PLA2G12BQ9BX93 195 aa15.83■□□□□ 0.12
GTF2F1-201ENST00000394456 DYNC1I1O14576 645 aa15.82■□□□□ 0.12
GTF2F1-201ENST00000394456 KCNQ2O43526 872 aa15.82■□□□□ 0.12
GTF2F1-201ENST00000394456 ITGA6P23229 1130 aa15.82■□□□□ 0.12
GTF2F1-201ENST00000394456 ZNF75DP51815 510 aa15.82■□□□□ 0.12
GTF2F1-201ENST00000394456 TTLL11Q8NHH1 800 aa15.82■□□□□ 0.12
GTF2F1-201ENST00000394456 TOM1O60784 492 aa15.82■□□□□ 0.12
GTF2F1-201ENST00000394456 SNW1Q13573 536 aaKnown RBP15.82■□□□□ 0.12
GTF2F1-201ENST00000394456 GORABQ5T7V8 394 aa15.82■□□□□ 0.12
GTF2F1-201ENST00000394456 RFX7Q2KHR2 1363 aa15.82■□□□□ 0.12
GTF2F1-201ENST00000394456 POLR3DP05423 398 aaPredicted RBP15.81■□□□□ 0.12
GTF2F1-201ENST00000394456 CRKLP46109 303 aaKnown RBP15.81■□□□□ 0.12
GTF2F1-201ENST00000394456 ITPK1Q13572 414 aa15.81■□□□□ 0.12
GTF2F1-201ENST00000394456 INTS5Q6P9B9 1019 aaKnown RBP15.81■□□□□ 0.12
GTF2F1-201ENST00000394456 SALL1Q9NSC2 1324 aa15.81■□□□□ 0.12
GTF2F1-201ENST00000394456 LOC102724428A0A0B4J2F2 783 aa15.81■□□□□ 0.12
GTF2F1-201ENST00000394456 CTSWP56202 376 aa15.81■□□□□ 0.12
GTF2F1-201ENST00000394456 SIK1P57059 783 aa15.81■□□□□ 0.12
GTF2F1-201ENST00000394456 FAM98CQ17RN3 349 aaKnown RBP15.81■□□□□ 0.12
GTF2F1-201ENST00000394456 TTC39AQ5SRH9 613 aa15.81■□□□□ 0.12
GTF2F1-201ENST00000394456 CDHR2Q9BYE9 1310 aa15.81■□□□□ 0.12
GTF2F1-201ENST00000394456 FGAP02671 866 aa15.81■□□□□ 0.12
GTF2F1-201ENST00000394456 LDHAL6AQ6ZMR3 332 aa15.81■□□□□ 0.12
GTF2F1-201ENST00000394456 AGXT2Q9BYV1 514 aa15.81■□□□□ 0.12
GTF2F1-201ENST00000394456 CCDC87Q9NVE4 849 aa15.81■□□□□ 0.12
GTF2F1-201ENST00000394456 RXRAP19793 462 aa15.8■□□□□ 0.12
GTF2F1-201ENST00000394456 ANTXR2P58335 489 aa15.8■□□□□ 0.12
GTF2F1-201ENST00000394456 PLA2G4DQ86XP0 818 aa15.8■□□□□ 0.12
GTF2F1-201ENST00000394456 TDRD7Q8NHU6 1098 aaKnown RBP15.8■□□□□ 0.12
GTF2F1-201ENST00000394456 C8orf37Q96NL8 207 aa15.8■□□□□ 0.12
GTF2F1-201ENST00000394456 AIFM3Q96NN9 605 aa15.8■□□□□ 0.12
GTF2F1-201ENST00000394456 ZSCAN16Q9H4T2 348 aaPredicted RBP15.8■□□□□ 0.12
GTF2F1-201ENST00000394456 INCENPQ9NQS7 918 aa15.8■□□□□ 0.12
GTF2F1-201ENST00000394456 RCOR1Q9UKL0 485 aa15.8■□□□□ 0.12
GTF2F1-201ENST00000394456 SLIT2O94813 1529 aa15.8■□□□□ 0.12
GTF2F1-201ENST00000394456 NWD2Q9ULI1 1742 aa15.8■□□□□ 0.12
GTF2F1-201ENST00000394456 CARMIL3Q8ND23 1372 aa15.8■□□□□ 0.12
GTF2F1-201ENST00000394456 A0A1B0GVL5 298 aa15.8■□□□□ 0.12
GTF2F1-201ENST00000394456 ME1P48163 572 aa15.8■□□□□ 0.12
GTF2F1-201ENST00000394456 EIF5P55010 431 aaKnown RBP15.8■□□□□ 0.12
GTF2F1-201ENST00000394456 IQCB1Q15051 598 aa15.8■□□□□ 0.12
GTF2F1-201ENST00000394456 METTL24Q5JXM2 366 aa15.8■□□□□ 0.12
GTF2F1-201ENST00000394456 CACTINQ8WUQ7 758 aaKnown RBP15.8■□□□□ 0.12
GTF2F1-201ENST00000394456 CLIC4Q9Y696 253 aa15.8■□□□□ 0.12
GTF2F1-201ENST00000394456 RIC1Q4ADV7 1423 aa15.8■□□□□ 0.12
GTF2F1-201ENST00000394456 SNAP23O00161 211 aa15.79■□□□□ 0.12
GTF2F1-201ENST00000394456 FSIP1Q8NA03 581 aa15.79■□□□□ 0.12
GTF2F1-201ENST00000394456 SENP2Q9HC62 589 aa15.79■□□□□ 0.12
GTF2F1-201ENST00000394456 CNNM1Q9NRU3 951 aa15.79■□□□□ 0.12
GTF2F1-201ENST00000394456 ERVV-1B6SEH8 477 aa15.79■□□□□ 0.12
GTF2F1-201ENST00000394456 UBAP1LF5GYI3 381 aa15.79■□□□□ 0.12
GTF2F1-201ENST00000394456 RIOK3O14730 519 aaKnown RBP15.79■□□□□ 0.12
GTF2F1-201ENST00000394456 KCNQ4P56696 695 aa15.79■□□□□ 0.12
GTF2F1-201ENST00000394456 CCDC158Q5M9N0 1113 aa15.79■□□□□ 0.12
GTF2F1-201ENST00000394456 NAA16Q6N069 864 aaPredicted RBP15.79■□□□□ 0.12
GTF2F1-201ENST00000394456 LLPHQ9BRT6 129 aaKnown RBP15.79■□□□□ 0.12
GTF2F1-201ENST00000394456 CFAP45Q9UL16 551 aa15.79■□□□□ 0.12
GTF2F1-201ENST00000394456 HPS5Q9UPZ3 1129 aa15.79■□□□□ 0.12
GTF2F1-201ENST00000394456 ANKRD18BA2A2Z9 1011 aa15.78■□□□□ 0.12
GTF2F1-201ENST00000394456 HMGB1P09429 215 aaKnown RBP15.78■□□□□ 0.12
GTF2F1-201ENST00000394456 ZSCAN25Q6NSZ9 544 aa15.78■□□□□ 0.12
GTF2F1-201ENST00000394456 ZNF34Q8IZ26 560 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms