RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 ZCCHC17Q9NP64 241 aaKnown RBP11.62□□□□□ -0.55
PSEN1-204ENST00000394164 CEP126Q9P2H0 1117 aa11.62□□□□□ -0.55
PSEN1-204ENST00000394164 TBC1D2BQ9UPU7 963 aa11.62□□□□□ -0.55
PSEN1-204ENST00000394164 EYA2O00167 538 aa11.62□□□□□ -0.55
PSEN1-204ENST00000394164 SKILP12757 684 aa11.62□□□□□ -0.55
PSEN1-204ENST00000394164 KBTBD3Q8NAB2 608 aa11.62□□□□□ -0.55
PSEN1-204ENST00000394164 SNAP23O00161 211 aa11.61□□□□□ -0.55
PSEN1-204ENST00000394164 KRBA2Q6ZNG9 492 aa11.61□□□□□ -0.55
PSEN1-204ENST00000394164 AFDNP55196 1824 aaKnown RBP11.61□□□□□ -0.55
PSEN1-204ENST00000394164 ZNF165P49910 485 aa11.61□□□□□ -0.55
PSEN1-204ENST00000394164 ST5P78524 1137 aa11.61□□□□□ -0.55
PSEN1-204ENST00000394164 TTC39AQ5SRH9 613 aa11.61□□□□□ -0.55
PSEN1-204ENST00000394164 SYT10Q6XYQ8 523 aa11.61□□□□□ -0.55
PSEN1-204ENST00000394164 STK11IPQ8N1F8 1099 aa11.61□□□□□ -0.55
PSEN1-204ENST00000394164 KCNB2Q92953 911 aa11.61□□□□□ -0.55
PSEN1-204ENST00000394164 M0R2C6 588 aa11.6□□□□□ -0.55
PSEN1-204ENST00000394164 SLU7O95391 586 aaKnown RBP11.6□□□□□ -0.55
PSEN1-204ENST00000394164 SPATA32Q96LK8 384 aa11.6□□□□□ -0.55
PSEN1-204ENST00000394164 ERVV-2B6SEH9 535 aa11.6□□□□□ -0.55
PSEN1-204ENST00000394164 SEC31AO94979 1220 aaKnown RBP11.6□□□□□ -0.55
PSEN1-204ENST00000394164 IL15P40933 162 aaPredicted RBP11.6□□□□□ -0.55
PSEN1-204ENST00000394164 KRT85P78386 507 aa11.6□□□□□ -0.55
PSEN1-204ENST00000394164 SCRN1Q12765 414 aa11.6□□□□□ -0.55
PSEN1-204ENST00000394164 OTUD7BQ6GQQ9 843 aa11.6□□□□□ -0.55
PSEN1-204ENST00000394164 LCMT1Q9UIC8 334 aa11.6□□□□□ -0.55
PSEN1-204ENST00000394164 KIF1AQ12756 1690 aa11.6□□□□□ -0.55
PSEN1-204ENST00000394164 CLCN6P51797 869 aa11.6□□□□□ -0.55
PSEN1-204ENST00000394164 ANKRD1Q15327 319 aa11.6□□□□□ -0.55
PSEN1-204ENST00000394164 PLA2G4DQ86XP0 818 aa11.6□□□□□ -0.55
PSEN1-204ENST00000394164 LRRC8AQ8IWT6 810 aa11.6□□□□□ -0.55
PSEN1-204ENST00000394164 CCDC191Q8NCU4 936 aa11.6□□□□□ -0.55
PSEN1-204ENST00000394164 BICD2Q8TD16 824 aa11.6□□□□□ -0.55
PSEN1-204ENST00000394164 XAGE2Q96GT9 111 aa11.6□□□□□ -0.55
PSEN1-204ENST00000394164 ERO1AQ96HE7 468 aa11.6□□□□□ -0.55
PSEN1-204ENST00000394164 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.6□□□□□ -0.55
PSEN1-204ENST00000394164 HSPD1P10809 573 aaKnown RBP11.59□□□□□ -0.55
PSEN1-204ENST00000394164 ZAP70P43403 619 aa11.59□□□□□ -0.55
PSEN1-204ENST00000394164 SLC20A2Q08357 652 aa11.59□□□□□ -0.55
PSEN1-204ENST00000394164 BMS1Q14692 1282 aaKnown RBP11.59□□□□□ -0.55
PSEN1-204ENST00000394164 KIF6Q6ZMV9 814 aa11.59□□□□□ -0.55
PSEN1-204ENST00000394164 OSBP2Q969R2 916 aa11.59□□□□□ -0.55
PSEN1-204ENST00000394164 EPC1Q9H2F5 836 aa11.59□□□□□ -0.55
PSEN1-204ENST00000394164 U3KPZ7 1027 aaPredicted RBP11.59□□□□□ -0.55
PSEN1-204ENST00000394164 MAST3O60307 1309 aa11.59□□□□□ -0.55
PSEN1-204ENST00000394164 CCDC69A6NI79 296 aa11.59□□□□□ -0.55
PSEN1-204ENST00000394164 ARHGAP29Q52LW3 1261 aa11.59□□□□□ -0.55
PSEN1-204ENST00000394164 ERCC4Q92889 916 aaPredicted RBP11.59□□□□□ -0.55
PSEN1-204ENST00000394164 ACSBG1Q96GR2 724 aa11.59□□□□□ -0.55
PSEN1-204ENST00000394164 CARD10Q9BWT7 1032 aa11.59□□□□□ -0.55
PSEN1-204ENST00000394164 FHOD1Q9Y613 1164 aa11.59□□□□□ -0.55
PSEN1-204ENST00000394164 COL18A1P39060 1754 aa11.58□□□□□ -0.56
PSEN1-204ENST00000394164 GOLGA6L19H0YKK7 550 aa11.58□□□□□ -0.56
PSEN1-204ENST00000394164 PLA2G4AP47712 749 aa11.58□□□□□ -0.56
PSEN1-204ENST00000394164 IFIT5Q13325 482 aaKnown RBP11.58□□□□□ -0.56
PSEN1-204ENST00000394164 TCIRG1Q13488 830 aa11.58□□□□□ -0.56
PSEN1-204ENST00000394164 METTL24Q5JXM2 366 aa11.58□□□□□ -0.56
PSEN1-204ENST00000394164 LDHAL6AQ6ZMR3 332 aa11.58□□□□□ -0.56
PSEN1-204ENST00000394164 CCDC34Q96HJ3 373 aa11.58□□□□□ -0.56
PSEN1-204ENST00000394164 GREM2Q9H772 168 aa11.58□□□□□ -0.56
PSEN1-204ENST00000394164 TOMM22Q9NS69 142 aa11.58□□□□□ -0.56
PSEN1-204ENST00000394164 HMG20BQ9P0W2 317 aa11.58□□□□□ -0.56
PSEN1-204ENST00000394164 NR1I2O75469 434 aa11.58□□□□□ -0.56
PSEN1-204ENST00000394164 ADAMTS2O95450 1211 aa11.58□□□□□ -0.56
PSEN1-204ENST00000394164 APPP05067 770 aa11.58□□□□□ -0.56
PSEN1-204ENST00000394164 PNMA6AP0CW24 399 aaPredicted RBP11.58□□□□□ -0.56
PSEN1-204ENST00000394164 SMARCE1Q969G3 411 aa11.58□□□□□ -0.56
PSEN1-204ENST00000394164 CNNM1Q9NRU3 951 aa11.58□□□□□ -0.56
PSEN1-204ENST00000394164 GJB4Q9NTQ9 266 aa11.58□□□□□ -0.56
PSEN1-204ENST00000394164 DENND2AQ9ULE3 1009 aa11.58□□□□□ -0.56
PSEN1-204ENST00000394164 E7EWF7 191 aa11.57□□□□□ -0.56
PSEN1-204ENST00000394164 CCDC158Q5M9N0 1113 aa11.57□□□□□ -0.56
PSEN1-204ENST00000394164 ATG3Q9NT62 314 aa11.57□□□□□ -0.56
PSEN1-204ENST00000394164 RNF113AO15541 343 aaKnown RBP11.57□□□□□ -0.56
PSEN1-204ENST00000394164 PDCP20941 246 aa11.57□□□□□ -0.56
PSEN1-204ENST00000394164 KRT32Q14532 448 aa11.57□□□□□ -0.56
PSEN1-204ENST00000394164 FAM53CQ9NYF3 392 aa11.57□□□□□ -0.56
PSEN1-204ENST00000394164 TRMT112Q9UI30 125 aaKnown RBP11.57□□□□□ -0.56
PSEN1-204ENST00000394164 ZBTB1Q9Y2K1 713 aa11.57□□□□□ -0.56
PSEN1-204ENST00000394164 COL5A2P05997 1499 aaPredicted RBP11.57□□□□□ -0.56
PSEN1-204ENST00000394164 IDH1O75874 414 aaKnown RBP11.57□□□□□ -0.56
PSEN1-204ENST00000394164 RXRAP19793 462 aa11.57□□□□□ -0.56
PSEN1-204ENST00000394164 USPL1Q5W0Q7 1092 aa11.57□□□□□ -0.56
PSEN1-204ENST00000394164 RGS22Q8NE09 1264 aa11.57□□□□□ -0.56
PSEN1-204ENST00000394164 PUS7LQ9H0K6 701 aaKnown RBP11.57□□□□□ -0.56
PSEN1-204ENST00000394164 CPDO75976 1380 aa11.56□□□□□ -0.56
PSEN1-204ENST00000394164 ARFGEF2Q9Y6D5 1785 aa11.56□□□□□ -0.56
PSEN1-204ENST00000394164 ITGA6P23229 1130 aa11.56□□□□□ -0.56
PSEN1-204ENST00000394164 SECISBP2LQ93073 1101 aaKnown RBP11.56□□□□□ -0.56
PSEN1-204ENST00000394164 RASSF4Q9H2L5 321 aa11.56□□□□□ -0.56
PSEN1-204ENST00000394164 PTPDC1A2A3K4 754 aa11.56□□□□□ -0.56
PSEN1-204ENST00000394164 C11orf57Q6ZUT1 292 aaPredicted RBP11.56□□□□□ -0.56
PSEN1-204ENST00000394164 DHX32Q7L7V1 743 aaKnown RBP11.56□□□□□ -0.56
PSEN1-204ENST00000394164 LEO1Q8WVC0 666 aaPredicted RBP11.56□□□□□ -0.56
PSEN1-204ENST00000394164 SLC4A9Q96Q91 983 aa11.56□□□□□ -0.56
PSEN1-204ENST00000394164 INCENPQ9NQS7 918 aa11.56□□□□□ -0.56
PSEN1-204ENST00000394164 CRYBG1Q9Y4K1 1723 aa11.55□□□□□ -0.56
PSEN1-204ENST00000394164 STARD3NLO95772 234 aa11.55□□□□□ -0.56
PSEN1-204ENST00000394164 KCNQ4P56696 695 aa11.55□□□□□ -0.56
PSEN1-204ENST00000394164 ZMYM1Q5SVZ6 1142 aa11.55□□□□□ -0.56
PSEN1-204ENST00000394164 TEX35Q5T0J7 233 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms