RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 QRICH2Q9H0J4 1663 aa10.48□□□□□ -0.73
CDH11-202ENST00000394156 NEURL1BA8MQ27 555 aa10.48□□□□□ -0.73
CDH11-202ENST00000394156 SMTNL1A8MU46 457 aa10.48□□□□□ -0.73
CDH11-202ENST00000394156 UNC5CLQ8IV45 518 aa10.48□□□□□ -0.73
CDH11-202ENST00000394156 KRI1Q8N9T8 703 aaKnown RBP10.48□□□□□ -0.73
CDH11-202ENST00000394156 ARHGAP45Q92619 1136 aa10.48□□□□□ -0.73
CDH11-202ENST00000394156 CCDC113Q9H0I3 377 aa10.48□□□□□ -0.73
CDH11-202ENST00000394156 ARGLU1Q9NWB6 273 aaPredicted RBP10.48□□□□□ -0.73
CDH11-202ENST00000394156 ZFYVE9O95405 1425 aa10.48□□□□□ -0.73
CDH11-202ENST00000394156 VTI1AQ96AJ9 217 aa10.47□□□□□ -0.73
CDH11-202ENST00000394156 BICD1Q96G01 975 aa10.47□□□□□ -0.73
CDH11-202ENST00000394156 SPHKAPQ2M3C7 1700 aa10.47□□□□□ -0.73
CDH11-202ENST00000394156 CHL1O00533 1208 aa10.47□□□□□ -0.73
CDH11-202ENST00000394156 POLR3GO15318 223 aaPredicted RBP10.47□□□□□ -0.73
CDH11-202ENST00000394156 TEX35Q5T0J7 233 aa10.47□□□□□ -0.73
CDH11-202ENST00000394156 LUZP1Q86V48 1076 aa10.47□□□□□ -0.73
CDH11-202ENST00000394156 PLEKHF1Q96S99 279 aa10.47□□□□□ -0.73
CDH11-202ENST00000394156 PSMD1Q99460 953 aa10.47□□□□□ -0.73
CDH11-202ENST00000394156 VWA3AA6NCI4 1184 aa10.47□□□□□ -0.73
CDH11-202ENST00000394156 GPAA1O43292 621 aa10.47□□□□□ -0.73
CDH11-202ENST00000394156 UQCRFS1P1P0C7P4 283 aa10.47□□□□□ -0.73
CDH11-202ENST00000394156 ZNF165P49910 485 aa10.47□□□□□ -0.73
CDH11-202ENST00000394156 FCHSD1Q86WN1 690 aa10.47□□□□□ -0.73
CDH11-202ENST00000394156 PRR36Q9H6K5 1346 aa10.47□□□□□ -0.73
CDH11-202ENST00000394156 ZNF532Q9HCE3 1301 aa10.47□□□□□ -0.73
CDH11-202ENST00000394156 A0A087WWV3 80 aa10.47□□□□□ -0.73
CDH11-202ENST00000394156 F13A1P00488 732 aa10.47□□□□□ -0.73
CDH11-202ENST00000394156 ARHGAP29Q52LW3 1261 aa10.47□□□□□ -0.73
CDH11-202ENST00000394156 HSP90B2PQ58FF3 399 aa10.47□□□□□ -0.73
CDH11-202ENST00000394156 ZNF526Q8TF50 670 aaPredicted RBP10.47□□□□□ -0.73
CDH11-202ENST00000394156 PHKG2P15735 406 aa10.47□□□□□ -0.73
CDH11-202ENST00000394156 PI16Q6UXB8 463 aa10.47□□□□□ -0.73
CDH11-202ENST00000394156 CIZ1Q9ULV3 898 aaPredicted RBP10.47□□□□□ -0.73
CDH11-202ENST00000394156 CBFA2T2O43439 604 aa10.47□□□□□ -0.73
CDH11-202ENST00000394156 UBA7P41226 1012 aa10.47□□□□□ -0.73
CDH11-202ENST00000394156 GCKRQ14397 625 aa10.47□□□□□ -0.73
CDH11-202ENST00000394156 SCAND2PQ9GZW5 306 aaPredicted RBP10.47□□□□□ -0.73
CDH11-202ENST00000394156 FKBP15Q5T1M5 1219 aa10.46□□□□□ -0.73
CDH11-202ENST00000394156 ESR2Q92731 530 aa10.46□□□□□ -0.73
CDH11-202ENST00000394156 CCDC102AQ96A19 550 aa10.46□□□□□ -0.73
CDH11-202ENST00000394156 SEC31BQ9NQW1 1179 aa10.46□□□□□ -0.73
CDH11-202ENST00000394156 PALD1Q9ULE6 856 aa10.46□□□□□ -0.73
CDH11-202ENST00000394156 MBD5Q9P267 1494 aa10.46□□□□□ -0.73
CDH11-202ENST00000394156 CLTCQ00610 1675 aaKnown RBP10.46□□□□□ -0.73
CDH11-202ENST00000394156 ALDH1L1O75891 902 aa10.46□□□□□ -0.73
CDH11-202ENST00000394156 CCDC174Q6PII3 467 aa10.46□□□□□ -0.73
CDH11-202ENST00000394156 OGFOD1Q8N543 542 aa10.46□□□□□ -0.73
CDH11-202ENST00000394156 GREM2Q9H772 168 aa10.46□□□□□ -0.73
CDH11-202ENST00000394156 GJC1P36383 396 aa10.46□□□□□ -0.74
CDH11-202ENST00000394156 TMEM266Q2M3C6 531 aa10.46□□□□□ -0.74
CDH11-202ENST00000394156 TBC1D10BQ4KMP7 808 aaPredicted RBP10.46□□□□□ -0.74
CDH11-202ENST00000394156 SHROOM2Q13796 1616 aa10.46□□□□□ -0.74
CDH11-202ENST00000394156 A0A0D9SFI3 127 aa10.46□□□□□ -0.74
CDH11-202ENST00000394156 CCDC40Q4G0X9 1142 aa10.46□□□□□ -0.74
CDH11-202ENST00000394156 CCT6AP40227 531 aaKnown RBP10.46□□□□□ -0.74
CDH11-202ENST00000394156 UBE2HP62256 183 aa10.46□□□□□ -0.74
CDH11-202ENST00000394156 CALML4Q96GE6 196 aa10.46□□□□□ -0.74
CDH11-202ENST00000394156 NYXQ9GZU5 481 aa10.46□□□□□ -0.74
CDH11-202ENST00000394156 HECW2Q9P2P5 1572 aa10.46□□□□□ -0.74
CDH11-202ENST00000394156 CCNT1O60563 726 aaKnown RBP10.45□□□□□ -0.74
CDH11-202ENST00000394156 HMGN5P82970 282 aaKnown RBP10.45□□□□□ -0.74
CDH11-202ENST00000394156 LETM2Q2VYF4 491 aa10.45□□□□□ -0.74
CDH11-202ENST00000394156 CDC37L1Q7L3B6 337 aa10.45□□□□□ -0.74
CDH11-202ENST00000394156 TEX11Q8IYF3 940 aa10.45□□□□□ -0.74
CDH11-202ENST00000394156 KIF5BP33176 963 aa10.45□□□□□ -0.74
CDH11-202ENST00000394156 LONRF3Q496Y0 759 aa10.45□□□□□ -0.74
CDH11-202ENST00000394156 ERVK-7P63135 1459 aa10.45□□□□□ -0.74
CDH11-202ENST00000394156 TMEM94Q12767 1356 aa10.45□□□□□ -0.74
CDH11-202ENST00000394156 GOLGA8HP0CJ92 632 aa10.45□□□□□ -0.74
CDH11-202ENST00000394156 CFAP74Q9C0B2 1584 aa10.45□□□□□ -0.74
CDH11-202ENST00000394156 HARSP12081 509 aaKnown RBP10.45□□□□□ -0.74
CDH11-202ENST00000394156 SFPQP23246 707 aaKnown RBP eCLIP10.45□□□□□ -0.74
CDH11-202ENST00000394156 TNIP1Q15025 636 aa10.45□□□□□ -0.74
CDH11-202ENST00000394156 PTPN14Q15678 1187 aa10.45□□□□□ -0.74
CDH11-202ENST00000394156 PIK3AP1Q6ZUJ8 805 aa10.45□□□□□ -0.74
CDH11-202ENST00000394156 SLF2Q8IX21 1173 aa10.45□□□□□ -0.74
CDH11-202ENST00000394156 PLCD3Q8N3E9 789 aa10.45□□□□□ -0.74
CDH11-202ENST00000394156 KRT23Q9C075 422 aa10.45□□□□□ -0.74
CDH11-202ENST00000394156 GIGYF1O75420 1035 aaPredicted RBP10.45□□□□□ -0.74
CDH11-202ENST00000394156 HIBADHP31937 336 aaKnown RBP10.45□□□□□ -0.74
CDH11-202ENST00000394156 TRIM47Q96LD4 638 aa10.45□□□□□ -0.74
CDH11-202ENST00000394156 TCP11L1Q9NUJ3 509 aa10.45□□□□□ -0.74
CDH11-202ENST00000394156 NOP2P46087 812 aaKnown RBP10.44□□□□□ -0.74
CDH11-202ENST00000394156 GTF2IP78347 998 aa10.44□□□□□ -0.74
CDH11-202ENST00000394156 KARSQ15046 597 aaKnown RBP10.44□□□□□ -0.74
CDH11-202ENST00000394156 STX1AQ16623 288 aa10.44□□□□□ -0.74
CDH11-202ENST00000394156 CCDC87Q9NVE4 849 aa10.44□□□□□ -0.74
CDH11-202ENST00000394156 SRP68Q9UHB9 627 aaKnown RBP10.44□□□□□ -0.74
CDH11-202ENST00000394156 TSG101Q99816 390 aa10.44□□□□□ -0.74
CDH11-202ENST00000394156 AK9Q5TCS8 1911 aa10.44□□□□□ -0.74
CDH11-202ENST00000394156 UBASH3AP57075 661 aa10.44□□□□□ -0.74
CDH11-202ENST00000394156 RBM17Q96I25 401 aaKnown RBP10.44□□□□□ -0.74
CDH11-202ENST00000394156 USP44Q9H0E7 712 aa10.44□□□□□ -0.74
CDH11-202ENST00000394156 PDE8AO60658 829 aa10.44□□□□□ -0.74
CDH11-202ENST00000394156 KIF4BQ2VIQ3 1234 aa10.44□□□□□ -0.74
CDH11-202ENST00000394156 JAKMIP3Q5VZ66 844 aa10.44□□□□□ -0.74
CDH11-202ENST00000394156 KIF20AO95235 890 aa10.44□□□□□ -0.74
CDH11-202ENST00000394156 RPS6KB1P23443 525 aa10.44□□□□□ -0.74
CDH11-202ENST00000394156 EAPPQ56P03 285 aaPredicted RBP10.44□□□□□ -0.74
CDH11-202ENST00000394156 USPL1Q5W0Q7 1092 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms