RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 U2AF2P26368 475 aaKnown RBP eCLIP16.28■□□□□ 0.2
GAPVD1-205ENST00000394084 NDUFA8P51970 172 aa16.28■□□□□ 0.2
GAPVD1-205ENST00000394084 CEP57L1Q8IYX8 460 aa16.28■□□□□ 0.2
GAPVD1-205ENST00000394084 ZCRB1Q8TBF4 217 aaKnown RBP16.28■□□□□ 0.2
GAPVD1-205ENST00000394084 MRFAP1L1Q96HT8 127 aa16.28■□□□□ 0.2
GAPVD1-205ENST00000394084 TMEM94Q12767 1356 aa16.27■□□□□ 0.2
GAPVD1-205ENST00000394084 FOXP2O15409 715 aa16.27■□□□□ 0.2
GAPVD1-205ENST00000394084 FGAP02671 866 aa16.27■□□□□ 0.2
GAPVD1-205ENST00000394084 IMMTQ16891 758 aaKnown RBP16.27■□□□□ 0.2
GAPVD1-205ENST00000394084 COL18A1P39060 1754 aa16.27■□□□□ 0.2
GAPVD1-205ENST00000394084 MST1RQ04912 1400 aa16.27■□□□□ 0.2
GAPVD1-205ENST00000394084 CCDC69A6NI79 296 aa16.27■□□□□ 0.19
GAPVD1-205ENST00000394084 SMTNL1A8MU46 457 aa16.27■□□□□ 0.19
GAPVD1-205ENST00000394084 ZAP70P43403 619 aa16.27■□□□□ 0.19
GAPVD1-205ENST00000394084 TAF7LQ5H9L4 462 aa16.27■□□□□ 0.19
GAPVD1-205ENST00000394084 PUS7LQ9H0K6 701 aaKnown RBP16.27■□□□□ 0.19
GAPVD1-205ENST00000394084 TRMT1Q9NXH9 659 aaKnown RBP16.27■□□□□ 0.19
GAPVD1-205ENST00000394084 ORC3Q9UBD5 711 aaPredicted RBP16.27■□□□□ 0.19
GAPVD1-205ENST00000394084 GLI3P10071 1580 aa16.26■□□□□ 0.19
GAPVD1-205ENST00000394084 BIN1O00499 593 aa16.26■□□□□ 0.19
GAPVD1-205ENST00000394084 SKILP12757 684 aa16.26■□□□□ 0.19
GAPVD1-205ENST00000394084 FMR1NBQ8N0W7 255 aaPredicted RBP16.26■□□□□ 0.19
GAPVD1-205ENST00000394084 ANKRD7Q92527 254 aa16.26■□□□□ 0.19
GAPVD1-205ENST00000394084 FAM89AQ96GI7 184 aa16.26■□□□□ 0.19
GAPVD1-205ENST00000394084 NCBP1Q09161 790 aaKnown RBP16.26■□□□□ 0.19
GAPVD1-205ENST00000394084 ATL3Q6DD88 541 aa16.26■□□□□ 0.19
GAPVD1-205ENST00000394084 SMAP1Q8IYB5 467 aaPredicted RBP16.26■□□□□ 0.19
GAPVD1-205ENST00000394084 MYH15Q9Y2K3 1946 aa16.26■□□□□ 0.19
GAPVD1-205ENST00000394084 CPLX1O14810 134 aa16.26■□□□□ 0.19
GAPVD1-205ENST00000394084 CIAO1O76071 339 aa16.26■□□□□ 0.19
GAPVD1-205ENST00000394084 CCDC112Q8NEF3 446 aa16.26■□□□□ 0.19
GAPVD1-205ENST00000394084 RTEL1Q9NZ71 1219 aa16.26■□□□□ 0.19
GAPVD1-205ENST00000394084 CTNNA3Q9UI47 895 aa16.26■□□□□ 0.19
GAPVD1-205ENST00000394084 LINC00301Q8NCQ3 95 aa16.25■□□□□ 0.19
GAPVD1-205ENST00000394084 ZRSR1Q15695 479 aaKnown RBP16.25■□□□□ 0.19
GAPVD1-205ENST00000394084 DPCR1Q3MIW9 517 aa16.25■□□□□ 0.19
GAPVD1-205ENST00000394084 CEP135Q66GS9 1140 aa16.25■□□□□ 0.19
GAPVD1-205ENST00000394084 ADALQ6DHV7 355 aa16.25■□□□□ 0.19
GAPVD1-205ENST00000394084 RALYLQ86SE5 291 aaKnown RBP16.25■□□□□ 0.19
GAPVD1-205ENST00000394084 DENND2AQ9ULE3 1009 aa16.25■□□□□ 0.19
GAPVD1-205ENST00000394084 ANTXR2P58335 489 aa16.24■□□□□ 0.19
GAPVD1-205ENST00000394084 SYNE4Q8N205 404 aa16.24■□□□□ 0.19
GAPVD1-205ENST00000394084 HPS5Q9UPZ3 1129 aa16.24■□□□□ 0.19
GAPVD1-205ENST00000394084 PCDH11XQ9BZA7 1347 aa16.24■□□□□ 0.19
GAPVD1-205ENST00000394084 PCDH11YQ9BZA8 1340 aa16.24■□□□□ 0.19
GAPVD1-205ENST00000394084 KIF28PB7ZC32 967 aa16.24■□□□□ 0.19
GAPVD1-205ENST00000394084 ISM2Q6H9L7 571 aa16.24■□□□□ 0.19
GAPVD1-205ENST00000394084 PRDM11Q9NQV5 511 aa16.24■□□□□ 0.19
GAPVD1-205ENST00000394084 TJP1Q07157 1748 aa16.24■□□□□ 0.19
GAPVD1-205ENST00000394084 RXRAP19793 462 aa16.24■□□□□ 0.19
GAPVD1-205ENST00000394084 MB21D2Q8IYB1 491 aaPredicted RBP16.24■□□□□ 0.19
GAPVD1-205ENST00000394084 NAT10Q9H0A0 1025 aaKnown RBP16.24■□□□□ 0.19
GAPVD1-205ENST00000394084 LAMB4A4D0S4 1761 aa16.23■□□□□ 0.19
GAPVD1-205ENST00000394084 TNS3Q68CZ2 1445 aa16.23■□□□□ 0.19
GAPVD1-205ENST00000394084 SPTLC2O15270 562 aa16.23■□□□□ 0.19
GAPVD1-205ENST00000394084 MYSM1Q5VVJ2 828 aa16.23■□□□□ 0.19
GAPVD1-205ENST00000394084 FBXO18Q8NFZ0 1043 aa16.23■□□□□ 0.19
GAPVD1-205ENST00000394084 AIFM3Q96NN9 605 aa16.23■□□□□ 0.19
GAPVD1-205ENST00000394084 ZNF213O14771 459 aa16.23■□□□□ 0.19
GAPVD1-205ENST00000394084 GPAA1O43292 621 aa16.23■□□□□ 0.19
GAPVD1-205ENST00000394084 SYNE3Q6ZMZ3 975 aa16.23■□□□□ 0.19
GAPVD1-205ENST00000394084 NCOA7Q8NI08 942 aa16.23■□□□□ 0.19
GAPVD1-205ENST00000394084 PKD1L3Q7Z443 1732 aa16.22■□□□□ 0.19
GAPVD1-205ENST00000394084 SMC2O95347 1197 aa16.22■□□□□ 0.19
GAPVD1-205ENST00000394084 CCZ1BP86790 482 aa16.22■□□□□ 0.19
GAPVD1-205ENST00000394084 CCZ1P86791 482 aaPredicted RBP16.22■□□□□ 0.19
GAPVD1-205ENST00000394084 LRRFIP1Q32MZ4 808 aaKnown RBP16.22■□□□□ 0.19
GAPVD1-205ENST00000394084 APPBP2Q92624 585 aa16.22■□□□□ 0.19
GAPVD1-205ENST00000394084 ATG3Q9NT62 314 aa16.22■□□□□ 0.19
GAPVD1-205ENST00000394084 AKAP2Q9Y2D5 859 aa16.22■□□□□ 0.19
GAPVD1-205ENST00000394084 MARCKSP29966 332 aaPredicted RBP16.22■□□□□ 0.19
GAPVD1-205ENST00000394084 EVCP57679 992 aa16.22■□□□□ 0.19
GAPVD1-205ENST00000394084 PTPN14Q15678 1187 aa16.22■□□□□ 0.19
GAPVD1-205ENST00000394084 NKX2-3Q8TAU0 364 aa16.22■□□□□ 0.19
GAPVD1-205ENST00000394084 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.22■□□□□ 0.19
GAPVD1-205ENST00000394084 KIAA1468Q9P260 1216 aa16.22■□□□□ 0.19
GAPVD1-205ENST00000394084 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.22■□□□□ 0.19
GAPVD1-205ENST00000394084 PRDM4Q9UKN5 801 aa16.22■□□□□ 0.19
GAPVD1-205ENST00000394084 PAXBP1Q9Y5B6 917 aa16.22■□□□□ 0.19
GAPVD1-205ENST00000394084 V9GYY5 206 aaPredicted RBP16.22■□□□□ 0.19
GAPVD1-205ENST00000394084 SPATA31A3Q5VYP0 1347 aa16.22■□□□□ 0.19
GAPVD1-205ENST00000394084 DHX16O60231 1041 aaKnown RBP16.22■□□□□ 0.19
GAPVD1-205ENST00000394084 TCIRG1Q13488 830 aa16.22■□□□□ 0.19
GAPVD1-205ENST00000394084 CHMP4CQ96CF2 233 aa16.22■□□□□ 0.19
GAPVD1-205ENST00000394084 ISCA1Q9BUE6 129 aa16.22■□□□□ 0.19
GAPVD1-205ENST00000394084 A0A1W2PQ27 194 aa16.21■□□□□ 0.19
GAPVD1-205ENST00000394084 A0A1W2PQ64 194 aa16.21■□□□□ 0.19
GAPVD1-205ENST00000394084 A0A1W2PQD8 194 aa16.21■□□□□ 0.19
GAPVD1-205ENST00000394084 ERVV-2B6SEH9 535 aa16.21■□□□□ 0.19
GAPVD1-205ENST00000394084 ZFYP08048 801 aaPredicted RBP16.21■□□□□ 0.19
GAPVD1-205ENST00000394084 GPTP24298 496 aa16.21■□□□□ 0.19
GAPVD1-205ENST00000394084 RBM6P78332 1123 aaKnown RBP16.21■□□□□ 0.19
GAPVD1-205ENST00000394084 KCNG4Q8TDN1 519 aa16.21■□□□□ 0.19
GAPVD1-205ENST00000394084 NEMFO60524 1076 aa16.21■□□□□ 0.19
GAPVD1-205ENST00000394084 APPP05067 770 aa16.21■□□□□ 0.19
GAPVD1-205ENST00000394084 IFIT5Q13325 482 aaKnown RBP16.21■□□□□ 0.19
GAPVD1-205ENST00000394084 STRN4Q9NRL3 753 aa16.21■□□□□ 0.19
GAPVD1-205ENST00000394084 IFNKQ9P0W0 207 aa16.21■□□□□ 0.19
GAPVD1-205ENST00000394084 SLC3A2P08195 630 aaKnown RBP16.2■□□□□ 0.18
GAPVD1-205ENST00000394084 METTL24Q5JXM2 366 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms