RNA–Protein interactions for RNA: ENST00000393400.6

TPRA1-203, Transcript of transmembrane protein adipocyte associated 1, humanhuman

TSL 1 (best)

Gene TPRA1, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRA1-203ENST00000393400 BCL11BQ9C0K0 894 aaPredicted RBP32.62■■■□□ 2.81
TPRA1-203ENST00000393400 MYO5AQ9Y4I1 1855 aaKnown RBP32.62■■■□□ 2.81
TPRA1-203ENST00000393400 UBE4AQ14139 1066 aa32.61■■■□□ 2.81
TPRA1-203ENST00000393400 TTLL5Q6EMB2 1281 aa32.61■■■□□ 2.81
TPRA1-203ENST00000393400 C3orf67Q6ZVT6 689 aa32.61■■■□□ 2.81
TPRA1-203ENST00000393400 CHAMP1Q96JM3 812 aa32.61■■■□□ 2.81
TPRA1-203ENST00000393400 LLPHQ9BRT6 129 aaKnown RBP32.61■■■□□ 2.81
TPRA1-203ENST00000393400 ZNF532Q9HCE3 1301 aa32.61■■■□□ 2.81
TPRA1-203ENST00000393400 PFKFB2O60825 505 aa32.61■■■□□ 2.81
TPRA1-203ENST00000393400 ZNF445P59923 1031 aa32.61■■■□□ 2.81
TPRA1-203ENST00000393400 MAP3K12Q12852 859 aa32.61■■■□□ 2.81
TPRA1-203ENST00000393400 FAM182BQ5T319 152 aa32.61■■■□□ 2.81
TPRA1-203ENST00000393400 BRF1Q92994 677 aa32.61■■■□□ 2.81
TPRA1-203ENST00000393400 CHMP4CQ96CF2 233 aa32.61■■■□□ 2.81
TPRA1-203ENST00000393400 SRP68Q9UHB9 627 aaKnown RBP32.61■■■□□ 2.81
TPRA1-203ENST00000393400 ZNF804BA4D1E1 1349 aa32.6■■■□□ 2.81
TPRA1-203ENST00000393400 ZMYM6O95789 1325 aa32.6■■■□□ 2.81
TPRA1-203ENST00000393400 GTF2E1P29083 439 aaPredicted RBP32.6■■■□□ 2.81
TPRA1-203ENST00000393400 ARHGEF1Q92888 912 aaKnown RBP32.6■■■□□ 2.81
TPRA1-203ENST00000393400 C4AP0C0L4 1744 aa32.59■■■□□ 2.81
TPRA1-203ENST00000393400 WDR19Q8NEZ3 1342 aa32.59■■■□□ 2.81
TPRA1-203ENST00000393400 A0A0G2JLW4 131 aa32.59■■■□□ 2.81
TPRA1-203ENST00000393400 LARP1BQ659C4 914 aaKnown RBP32.59■■■□□ 2.81
TPRA1-203ENST00000393400 EVCP57679 992 aa32.58■■■□□ 2.81
TPRA1-203ENST00000393400 TPTE2Q6XPS3 522 aa32.58■■■□□ 2.81
TPRA1-203ENST00000393400 BICDL1Q6ZP65 573 aa32.58■■■□□ 2.81
TPRA1-203ENST00000393400 WWC3Q9ULE0 1092 aa32.58■■■□□ 2.81
TPRA1-203ENST00000393400 FGD1P98174 961 aa32.58■■■□□ 2.81
TPRA1-203ENST00000393400 ALX1Q15699 326 aa32.58■■■□□ 2.81
TPRA1-203ENST00000393400 NBPF5PQ86XG9 351 aaPredicted RBP32.58■■■□□ 2.81
TPRA1-203ENST00000393400 NLRP3Q96P20 1036 aa32.58■■■□□ 2.81
TPRA1-203ENST00000393400 SNAP23O00161 211 aa32.57■■■□□ 2.8
TPRA1-203ENST00000393400 ZNF274Q96GC6 653 aaPredicted RBP32.57■■■□□ 2.8
TPRA1-203ENST00000393400 XRCC6P12956 609 aaKnown RBP eCLIP32.56■■■□□ 2.8
TPRA1-203ENST00000393400 ADRA2BP18089 450 aa32.56■■■□□ 2.8
TPRA1-203ENST00000393400 BCAMP50895 628 aa32.56■■■□□ 2.8
TPRA1-203ENST00000393400 CAVIN1Q6NZI2 390 aaKnown RBP32.56■■■□□ 2.8
TPRA1-203ENST00000393400 ZNF213O14771 459 aa32.56■■■□□ 2.8
TPRA1-203ENST00000393400 NCLP19338 710 aaKnown RBP32.55■■■□□ 2.8
TPRA1-203ENST00000393400 SMARCC2Q8TAQ2 1214 aa32.55■■■□□ 2.8
TPRA1-203ENST00000393400 STRBPQ96SI9 672 aaKnown RBP32.55■■■□□ 2.8
TPRA1-203ENST00000393400 GRPEL1Q9HAV7 217 aa32.55■■■□□ 2.8
TPRA1-203ENST00000393400 MINPP1Q9UNW1 487 aa32.55■■■□□ 2.8
TPRA1-203ENST00000393400 STK3Q13188 491 aa32.54■■■□□ 2.8
TPRA1-203ENST00000393400 CSPP1Q1MSJ5 1256 aa32.54■■■□□ 2.8
TPRA1-203ENST00000393400 SMIM5Q71RC9 77 aa32.54■■■□□ 2.8
TPRA1-203ENST00000393400 MB21D2Q8IYB1 491 aaPredicted RBP32.54■■■□□ 2.8
TPRA1-203ENST00000393400 TRAPPC3LQ5T215 181 aa32.54■■■□□ 2.8
TPRA1-203ENST00000393400 USP48Q86UV5 1035 aa32.54■■■□□ 2.8
TPRA1-203ENST00000393400 NCOA7Q8NI08 942 aa32.54■■■□□ 2.8
TPRA1-203ENST00000393400 LRRC2Q9BYS8 371 aa32.54■■■□□ 2.8
TPRA1-203ENST00000393400 GNL3LQ9NVN8 582 aaKnown RBP32.54■■■□□ 2.8
TPRA1-203ENST00000393400 SCRN1Q12765 414 aa32.53■■■□□ 2.8
TPRA1-203ENST00000393400 ZSCAN23Q3MJ62 389 aa32.53■■■□□ 2.8
TPRA1-203ENST00000393400 GAS2L3Q86XJ1 694 aa32.53■■■□□ 2.8
TPRA1-203ENST00000393400 TCHHQ07283 1943 aa32.53■■■□□ 2.8
TPRA1-203ENST00000393400 MCM5P33992 734 aa32.52■■■□□ 2.8
TPRA1-203ENST00000393400 AMIGO3Q86WK7 504 aa32.52■■■□□ 2.8
TPRA1-203ENST00000393400 AIDAQ96BJ3 306 aa32.52■■■□□ 2.8
TPRA1-203ENST00000393400 VPS37CA5D8V6 355 aaPredicted RBP32.51■■■□□ 2.8
TPRA1-203ENST00000393400 ZBTB22O15209 634 aa32.51■■■□□ 2.8
TPRA1-203ENST00000393400 RFC4P35249 363 aa32.51■■■□□ 2.8
TPRA1-203ENST00000393400 RPS8P62241 208 aaKnown RBP32.51■■■□□ 2.8
TPRA1-203ENST00000393400 CELF1Q92879 486 aaKnown RBP32.51■■■□□ 2.8
TPRA1-203ENST00000393400 MAGEB6Q8N7X4 407 aa32.51■■■□□ 2.79
TPRA1-203ENST00000393400 HAND2P61296 217 aa32.5■■■□□ 2.79
TPRA1-203ENST00000393400 HMGN5P82970 282 aaKnown RBP32.5■■■□□ 2.79
TPRA1-203ENST00000393400 APOBRQ0VD83 1088 aa32.5■■■□□ 2.79
TPRA1-203ENST00000393400 QTRT2Q9H974 415 aaKnown RBP32.5■■■□□ 2.79
TPRA1-203ENST00000393400 CNPY2Q9Y2B0 182 aa32.5■■■□□ 2.79
TPRA1-203ENST00000393400 PNPLA7Q6ZV29 1317 aa32.5■■■□□ 2.79
TPRA1-203ENST00000393400 TAF1P21675 1872 aa32.49■■■□□ 2.79
TPRA1-203ENST00000393400 CARMIL3Q8ND23 1372 aa32.49■■■□□ 2.79
TPRA1-203ENST00000393400 PATL2C9JE40 543 aaKnown RBP32.49■■■□□ 2.79
TPRA1-203ENST00000393400 GNAT2P19087 354 aa32.49■■■□□ 2.79
TPRA1-203ENST00000393400 FAM196AQ6ZSG2 479 aa32.49■■■□□ 2.79
TPRA1-203ENST00000393400 RALYLQ86SE5 291 aaKnown RBP32.49■■■□□ 2.79
TPRA1-203ENST00000393400 ANKRD2Q9GZV1 360 aa32.49■■■□□ 2.79
TPRA1-203ENST00000393400 PDIA3P30101 505 aaKnown RBP32.48■■■□□ 2.79
TPRA1-203ENST00000393400 CAVIN4Q5BKX8 364 aa32.48■■■□□ 2.79
TPRA1-203ENST00000393400 SYAP1Q96A49 352 aaPredicted RBP32.48■■■□□ 2.79
TPRA1-203ENST00000393400 KIF3AQ9Y496 699 aa32.48■■■□□ 2.79
TPRA1-203ENST00000393400 SEMA3EO15041 775 aa32.47■■■□□ 2.79
TPRA1-203ENST00000393400 SLC27A3Q5K4L6 730 aa32.47■■■□□ 2.79
TPRA1-203ENST00000393400 NSUN7Q8NE18 718 aaKnown RBP32.47■■■□□ 2.79
TPRA1-203ENST00000393400 TMEM63CQ9P1W3 806 aa32.47■■■□□ 2.79
TPRA1-203ENST00000393400 NSFL1CQ9UNZ2 370 aaKnown RBP32.47■■■□□ 2.79
TPRA1-203ENST00000393400 PDS5AQ29RF7 1337 aaKnown RBP32.47■■■□□ 2.79
TPRA1-203ENST00000393400 FOXD4L6Q3SYB3 417 aaPredicted RBP32.47■■■□□ 2.79
TPRA1-203ENST00000393400 FOXD4L3Q6VB84 417 aaPredicted RBP32.47■■■□□ 2.79
TPRA1-203ENST00000393400 CDC37L1Q7L3B6 337 aa32.47■■■□□ 2.79
TPRA1-203ENST00000393400 NBPF3Q9H094 633 aa32.47■■■□□ 2.79
TPRA1-203ENST00000393400 LRRC4BQ9NT99 713 aa32.47■■■□□ 2.79
TPRA1-203ENST00000393400 PRC1O43663 620 aa32.46■■■□□ 2.79
TPRA1-203ENST00000393400 JAK2O60674 1132 aa32.46■■■□□ 2.79
TPRA1-203ENST00000393400 UBE2HP62256 183 aa32.46■■■□□ 2.79
TPRA1-203ENST00000393400 GDPD2Q9HCC8 539 aa32.46■■■□□ 2.79
TPRA1-203ENST00000393400 UBR3Q6ZT12 1888 aa32.46■■■□□ 2.79
TPRA1-203ENST00000393400 HMGB2P26583 209 aaKnown RBP32.45■■■□□ 2.79
TPRA1-203ENST00000393400 TM4SF1P30408 202 aa32.45■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms