RNA–Protein interactions for RNA: ENST00000392869.6

GTDC1-204, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GTDC1, Length 10,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-204ENST00000392869 DKC1O60832 514 aaKnown RBP eCLIP6.87□□□□□ -1.31
GTDC1-204ENST00000392869 TRIM60Q495X7 471 aa6.87□□□□□ -1.31
GTDC1-204ENST00000392869 NECTIN2Q92692 538 aa6.87□□□□□ -1.31
GTDC1-204ENST00000392869 DDX27Q96GQ7 796 aaKnown RBP6.87□□□□□ -1.31
GTDC1-204ENST00000392869 N4BP3O15049 544 aa6.87□□□□□ -1.31
GTDC1-204ENST00000392869 ZNF189O75820 626 aaPredicted RBP6.87□□□□□ -1.31
GTDC1-204ENST00000392869 IFIT1P09914 478 aaKnown RBP6.87□□□□□ -1.31
GTDC1-204ENST00000392869 GNAT2P19087 354 aa6.87□□□□□ -1.31
GTDC1-204ENST00000392869 ABCD1P33897 745 aa6.87□□□□□ -1.31
GTDC1-204ENST00000392869 MCTP2Q6DN12 878 aa6.87□□□□□ -1.31
GTDC1-204ENST00000392869 APLFQ8IW19 511 aaPredicted RBP6.87□□□□□ -1.31
GTDC1-204ENST00000392869 SYCP3Q8IZU3 236 aa6.87□□□□□ -1.31
GTDC1-204ENST00000392869 DTNBP1Q96EV8 351 aa6.87□□□□□ -1.31
GTDC1-204ENST00000392869 TROVE2P10155 538 aaKnown RBP eCLIP6.87□□□□□ -1.31
GTDC1-204ENST00000392869 MAN1A1P33908 653 aa6.87□□□□□ -1.31
GTDC1-204ENST00000392869 HDGFL1Q5TGJ6 251 aa6.87□□□□□ -1.31
GTDC1-204ENST00000392869 NOP14P78316 857 aaKnown RBP6.87□□□□□ -1.31
GTDC1-204ENST00000392869 BRD3Q15059 726 aa6.87□□□□□ -1.31
GTDC1-204ENST00000392869 MAK16Q9BXY0 300 aaKnown RBP6.87□□□□□ -1.31
GTDC1-204ENST00000392869 IL16Q14005 1332 aa6.87□□□□□ -1.31
GTDC1-204ENST00000392869 NUTM2AQ8IVF1 878 aaPredicted RBP6.87□□□□□ -1.31
GTDC1-204ENST00000392869 ANKRD50Q9ULJ7 1429 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 LMNAP02545 664 aaKnown RBP6.86□□□□□ -1.31
GTDC1-204ENST00000392869 CABS1Q96KC9 395 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 TRIM47Q96LD4 638 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 PAK2Q13177 524 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 PPP1R7Q15435 360 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 ANKRD20A3Q5VUR7 823 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 BBOF1Q8ND07 529 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 SPZ1Q9BXG8 430 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 NPHP3Q7Z494 1330 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 EFCAB13Q8IY85 973 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 MKNK2Q9HBH9 465 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 LRP2BPQ9P2M1 347 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 MAD1L1Q9Y6D9 718 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 PPP4R1Q8TF05 950 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 MRPL40Q9NQ50 206 aaKnown RBP6.86□□□□□ -1.31
GTDC1-204ENST00000392869 STX10O60499 249 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 IARSP41252 1262 aaKnown RBP6.86□□□□□ -1.31
GTDC1-204ENST00000392869 MUM1Q2TAK8 710 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 KCNH5Q8NCM2 988 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 WHAMMQ8TF30 809 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 GOLGA8KD6RF30 607 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 EFCAB14O75071 495 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 RRP36Q96EU6 259 aaKnown RBP6.86□□□□□ -1.31
GTDC1-204ENST00000392869 ORC6Q9Y5N6 252 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 HS2ST1Q7LGA3 356 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 AACSQ86V21 672 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 ZNF444Q8N0Y2 327 aaPredicted RBP6.86□□□□□ -1.31
GTDC1-204ENST00000392869 CCDC51Q96ER9 411 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 EFHD1Q9BUP0 239 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 TTC36A6NLP5 189 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 THAP12O43422 761 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 PSMA4P25789 261 aaKnown RBP6.86□□□□□ -1.31
GTDC1-204ENST00000392869 CUL4BQ13620 913 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 RUFY3Q7L099 469 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 EFCC1Q9HA90 598 aa6.86□□□□□ -1.31
GTDC1-204ENST00000392869 LRRC9Q6ZRR7 1453 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 SRGAP3O43295 1099 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 MAN1A2O60476 641 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 CRCPO75575 148 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 ITIH3Q06033 890 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.85□□□□□ -1.31
GTDC1-204ENST00000392869 JRKLQ9Y4A0 524 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 LRPPRCP42704 1394 aaKnown RBP6.85□□□□□ -1.31
GTDC1-204ENST00000392869 CYP26C1Q6V0L0 522 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 RASEFQ8IZ41 740 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 NCOA7Q8NI08 942 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 KLHL14Q9P2G3 628 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 CASKIN1Q8WXD9 1431 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 GOLGA8AA7E2F4 631 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 GOLGA8BA8MQT2 603 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 GNA14O95837 355 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 ATP2B1P20020 1258 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 SYKP43405 635 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 NBPF6Q5VWK0 638 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 CCDC25Q86WR0 208 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 CCDC89Q8N998 374 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 NEK11Q8NG66 645 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 NBPF4Q96M43 638 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 FAM96AQ9H5X1 160 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 DIABLOQ9NR28 239 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 VPS18Q9P253 973 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 RTL9Q8NET4 1388 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 FKBP4Q02790 459 aaKnown RBP eCLIP6.85□□□□□ -1.31
GTDC1-204ENST00000392869 NOX5Q96PH1 765 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 STAT6P42226 847 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 CCDC84Q86UT8 332 aaPredicted RBP6.85□□□□□ -1.31
GTDC1-204ENST00000392869 TCP11L2Q8N4U5 519 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 PALM3A6NDB9 673 aaPredicted RBP6.85□□□□□ -1.31
GTDC1-204ENST00000392869 F8W8V4 182 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 IPO5O00410 1097 aaKnown RBP6.85□□□□□ -1.31
GTDC1-204ENST00000392869 ASPHQ12797 758 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 TRIM4Q9C037 500 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 IQSEC3Q9UPP2 1182 aaPredicted RBP6.85□□□□□ -1.31
GTDC1-204ENST00000392869 FLOT1O75955 427 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 PIP4K2CQ8TBX8 421 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 VTI1AQ96AJ9 217 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 CENPKQ9BS16 269 aa6.85□□□□□ -1.31
GTDC1-204ENST00000392869 EDEM3Q9BZQ6 932 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms