RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 TAF6LQ9Y6J9 622 aa13.66□□□□□ -0.22
SMARCAL1-203ENST00000392128 TCRBV5S4A2TA0A5A2 114 aa13.66□□□□□ -0.22
SMARCAL1-203ENST00000392128 MAP3K12Q12852 859 aa13.66□□□□□ -0.22
SMARCAL1-203ENST00000392128 NOL8Q76FK4 1167 aaKnown RBP13.66□□□□□ -0.22
SMARCAL1-203ENST00000392128 FBXO41Q8TF61 875 aa13.66□□□□□ -0.22
SMARCAL1-203ENST00000392128 RPS6KB1P23443 525 aa13.65□□□□□ -0.22
SMARCAL1-203ENST00000392128 NUCB2P80303 420 aa13.65□□□□□ -0.22
SMARCAL1-203ENST00000392128 WWC3Q9ULE0 1092 aa13.65□□□□□ -0.22
SMARCAL1-203ENST00000392128 ZNF532Q9HCE3 1301 aa13.65□□□□□ -0.22
SMARCAL1-203ENST00000392128 ZBTB22O15209 634 aa13.65□□□□□ -0.22
SMARCAL1-203ENST00000392128 FOXP2O15409 715 aa13.65□□□□□ -0.22
SMARCAL1-203ENST00000392128 GPAA1O43292 621 aa13.65□□□□□ -0.22
SMARCAL1-203ENST00000392128 GYG1P46976 350 aa13.65□□□□□ -0.22
SMARCAL1-203ENST00000392128 COL23A1Q86Y22 540 aaPredicted RBP13.65□□□□□ -0.22
SMARCAL1-203ENST00000392128 FAM84BQ96KN1 310 aaPredicted RBP13.65□□□□□ -0.22
SMARCAL1-203ENST00000392128 CTNNA3Q9UI47 895 aa13.65□□□□□ -0.22
SMARCAL1-203ENST00000392128 SEMA3EO15041 775 aa13.64□□□□□ -0.23
SMARCAL1-203ENST00000392128 ANKRD1Q15327 319 aa13.64□□□□□ -0.23
SMARCAL1-203ENST00000392128 FBXO33Q7Z6M2 555 aa13.64□□□□□ -0.23
SMARCAL1-203ENST00000392128 NLGN1Q8N2Q7 840 aa13.64□□□□□ -0.23
SMARCAL1-203ENST00000392128 RPGRQ92834 1020 aaKnown RBP13.64□□□□□ -0.23
SMARCAL1-203ENST00000392128 ZSCAN31Q96LW9 406 aaPredicted RBP13.64□□□□□ -0.23
SMARCAL1-203ENST00000392128 NEK1Q96PY6 1258 aa13.64□□□□□ -0.23
SMARCAL1-203ENST00000392128 ANKRD31Q8N7Z5 1873 aa13.64□□□□□ -0.23
SMARCAL1-203ENST00000392128 PDS5AQ29RF7 1337 aaKnown RBP13.64□□□□□ -0.23
SMARCAL1-203ENST00000392128 COL1A1P02452 1464 aaPredicted RBP13.64□□□□□ -0.23
SMARCAL1-203ENST00000392128 KLRG2A4D1S0 409 aaPredicted RBP13.64□□□□□ -0.23
SMARCAL1-203ENST00000392128 WTIPA6NIX2 430 aaPredicted RBP13.64□□□□□ -0.23
SMARCAL1-203ENST00000392128 TNPO1Q92973 898 aaKnown RBP13.64□□□□□ -0.23
SMARCAL1-203ENST00000392128 SH2B1Q9NRF2 756 aaPredicted RBP13.64□□□□□ -0.23
SMARCAL1-203ENST00000392128 DENND2AQ9ULE3 1009 aa13.64□□□□□ -0.23
SMARCAL1-203ENST00000392128 HMGB1P09429 215 aaKnown RBP13.63□□□□□ -0.23
SMARCAL1-203ENST00000392128 VPS37DQ86XT2 251 aa13.63□□□□□ -0.23
SMARCAL1-203ENST00000392128 RBM17Q96I25 401 aaKnown RBP13.63□□□□□ -0.23
SMARCAL1-203ENST00000392128 IRS2Q9Y4H2 1338 aa13.63□□□□□ -0.23
SMARCAL1-203ENST00000392128 QSER1Q2KHR3 1735 aa13.63□□□□□ -0.23
SMARCAL1-203ENST00000392128 HOXA10P31260 410 aaPredicted RBP13.63□□□□□ -0.23
SMARCAL1-203ENST00000392128 MAGEB6Q8N7X4 407 aa13.63□□□□□ -0.23
SMARCAL1-203ENST00000392128 COL9A3Q14050 684 aaPredicted RBP13.62□□□□□ -0.23
SMARCAL1-203ENST00000392128 STOX1Q6ZVD7 989 aa13.62□□□□□ -0.23
SMARCAL1-203ENST00000392128 LEMD3Q9Y2U8 911 aa13.62□□□□□ -0.23
SMARCAL1-203ENST00000392128 LRRC37AA6NMS7 1700 aa13.62□□□□□ -0.23
SMARCAL1-203ENST00000392128 FGAP02671 866 aa13.62□□□□□ -0.23
SMARCAL1-203ENST00000392128 MCM4P33991 863 aa13.62□□□□□ -0.23
SMARCAL1-203ENST00000392128 CLEC17AQ6ZS10 378 aa13.62□□□□□ -0.23
SMARCAL1-203ENST00000392128 XDHP47989 1333 aa13.61□□□□□ -0.23
SMARCAL1-203ENST00000392128 PNPLA7Q6ZV29 1317 aa13.61□□□□□ -0.23
SMARCAL1-203ENST00000392128 CACNA1SQ13698 1873 aa13.61□□□□□ -0.23
SMARCAL1-203ENST00000392128 KLRK1P26718 216 aa13.61□□□□□ -0.23
SMARCAL1-203ENST00000392128 HIBADHP31937 336 aaKnown RBP13.61□□□□□ -0.23
SMARCAL1-203ENST00000392128 IMMTQ16891 758 aaKnown RBP13.61□□□□□ -0.23
SMARCAL1-203ENST00000392128 AIDAQ96BJ3 306 aa13.61□□□□□ -0.23
SMARCAL1-203ENST00000392128 STRBPQ96SI9 672 aaKnown RBP13.61□□□□□ -0.23
SMARCAL1-203ENST00000392128 LRP2BPQ9P2M1 347 aa13.61□□□□□ -0.23
SMARCAL1-203ENST00000392128 E7EWF7 191 aa13.61□□□□□ -0.23
SMARCAL1-203ENST00000392128 LARGE1O95461 756 aa13.61□□□□□ -0.23
SMARCAL1-203ENST00000392128 TOB2Q14106 344 aaPredicted RBP13.61□□□□□ -0.23
SMARCAL1-203ENST00000392128 TTLL5Q6EMB2 1281 aa13.61□□□□□ -0.23
SMARCAL1-203ENST00000392128 GBP4Q96PP9 640 aa13.61□□□□□ -0.23
SMARCAL1-203ENST00000392128 CRAMP1Q96RY5 1269 aa13.61□□□□□ -0.23
SMARCAL1-203ENST00000392128 TPCN1Q9ULQ1 816 aa13.61□□□□□ -0.23
SMARCAL1-203ENST00000392128 IQSEC3Q9UPP2 1182 aaPredicted RBP13.61□□□□□ -0.23
SMARCAL1-203ENST00000392128 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.61□□□□□ -0.23
SMARCAL1-203ENST00000392128 ZMYM6O95789 1325 aa13.6□□□□□ -0.23
SMARCAL1-203ENST00000392128 MAST2Q6P0Q8 1798 aa13.6□□□□□ -0.23
SMARCAL1-203ENST00000392128 BBOX1O75936 387 aa13.6□□□□□ -0.23
SMARCAL1-203ENST00000392128 DHX32Q7L7V1 743 aaKnown RBP13.6□□□□□ -0.23
SMARCAL1-203ENST00000392128 LARP6Q9BRS8 491 aaKnown RBP13.6□□□□□ -0.23
SMARCAL1-203ENST00000392128 ANKIB1Q9P2G1 1089 aa13.6□□□□□ -0.23
SMARCAL1-203ENST00000392128 A0A0G2JLW4 131 aa13.6□□□□□ -0.23
SMARCAL1-203ENST00000392128 ME3Q16798 604 aa13.6□□□□□ -0.23
SMARCAL1-203ENST00000392128 C15orf52Q6ZUT6 534 aaKnown RBP13.6□□□□□ -0.23
SMARCAL1-203ENST00000392128 TCEANC2Q96MN5 208 aa13.6□□□□□ -0.23
SMARCAL1-203ENST00000392128 BRIP1Q9BX63 1249 aa13.6□□□□□ -0.23
SMARCAL1-203ENST00000392128 ANO8Q9HCE9 1232 aaPredicted RBP13.6□□□□□ -0.23
SMARCAL1-203ENST00000392128 LTBP1Q14766 1721 aa13.59□□□□□ -0.23
SMARCAL1-203ENST00000392128 CCDC88AQ3V6T2 1871 aa13.59□□□□□ -0.23
SMARCAL1-203ENST00000392128 DDX11L8A8MPP1 907 aa13.59□□□□□ -0.23
SMARCAL1-203ENST00000392128 PKP1Q13835 747 aa13.59□□□□□ -0.23
SMARCAL1-203ENST00000392128 ALX1Q15699 326 aa13.59□□□□□ -0.23
SMARCAL1-203ENST00000392128 TMC4Q7Z404 712 aa13.59□□□□□ -0.23
SMARCAL1-203ENST00000392128 CAMKK2Q96RR4 588 aa13.59□□□□□ -0.23
SMARCAL1-203ENST00000392128 MBD4O95243 580 aa13.59□□□□□ -0.23
SMARCAL1-203ENST00000392128 GNAT2P19087 354 aa13.59□□□□□ -0.23
SMARCAL1-203ENST00000392128 EXOSC10Q01780 885 aaKnown RBP13.59□□□□□ -0.23
SMARCAL1-203ENST00000392128 KIAA1551Q9HCM1 1747 aa13.59□□□□□ -0.23
SMARCAL1-203ENST00000392128 ABCF2Q9UG63 623 aa13.59□□□□□ -0.23
SMARCAL1-203ENST00000392128 CHD4Q14839 1912 aa13.58□□□□□ -0.24
SMARCAL1-203ENST00000392128 PATL2C9JE40 543 aaKnown RBP13.58□□□□□ -0.24
SMARCAL1-203ENST00000392128 ZNF213O14771 459 aa13.58□□□□□ -0.24
SMARCAL1-203ENST00000392128 TMED8Q6PL24 325 aaPredicted RBP13.58□□□□□ -0.24
SMARCAL1-203ENST00000392128 Q6ZUG5 572 aa13.58□□□□□ -0.24
SMARCAL1-203ENST00000392128 TXNRD3Q86VQ6 643 aa13.58□□□□□ -0.24
SMARCAL1-203ENST00000392128 AGXT2Q9BYV1 514 aa13.58□□□□□ -0.24
SMARCAL1-203ENST00000392128 ZDHHC9Q9Y397 364 aa13.58□□□□□ -0.24
SMARCAL1-203ENST00000392128 ST3GAL1Q11201 340 aa13.58□□□□□ -0.24
SMARCAL1-203ENST00000392128 CCDC83Q8IWF9 413 aa13.58□□□□□ -0.24
SMARCAL1-203ENST00000392128 FBXL16Q8N461 479 aa13.58□□□□□ -0.24
SMARCAL1-203ENST00000392128 PODXL2Q9NZ53 605 aa13.58□□□□□ -0.24
SMARCAL1-203ENST00000392128 RAI14Q9P0K7 980 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms