RNA–Protein interactions for RNA: ENST00000390870.1

RNU1-149P-201, Transcript of RNA, U1 small nuclear 149, pseudogene, humanhuman

BASIC

Gene RNU1-149P, Length 161 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-149P-201ENST00000390870 SLC4A9Q96Q91 983 aa7.05□□□□□ -1.28
RNU1-149P-201ENST00000390870 MTFR1LQ9H019 292 aa7.05□□□□□ -1.28
RNU1-149P-201ENST00000390870 ADAMTS8Q9UP79 889 aa7.05□□□□□ -1.28
RNU1-149P-201ENST00000390870 RBM19Q9Y4C8 960 aaKnown RBP7.05□□□□□ -1.28
RNU1-149P-201ENST00000390870 LAMB4A4D0S4 1761 aa7.05□□□□□ -1.28
RNU1-149P-201ENST00000390870 CNTNAP4Q9C0A0 1308 aa7.04□□□□□ -1.28
RNU1-149P-201ENST00000390870 ESPNB1AK53 854 aa7.04□□□□□ -1.28
RNU1-149P-201ENST00000390870 HTATSF1O43719 755 aaKnown RBP7.04□□□□□ -1.28
RNU1-149P-201ENST00000390870 VARSP26640 1264 aaKnown RBP7.04□□□□□ -1.28
RNU1-149P-201ENST00000390870 SSFA2P28290 1259 aa7.04□□□□□ -1.28
RNU1-149P-201ENST00000390870 POLD1P28340 1107 aa7.04□□□□□ -1.28
RNU1-149P-201ENST00000390870 CRKLP46109 303 aaKnown RBP7.04□□□□□ -1.28
RNU1-149P-201ENST00000390870 GTF2IP78347 998 aa7.04□□□□□ -1.28
RNU1-149P-201ENST00000390870 CLDN10P78369 228 aa7.04□□□□□ -1.28
RNU1-149P-201ENST00000390870 LMOD3Q0VAK6 560 aa7.04□□□□□ -1.28
RNU1-149P-201ENST00000390870 CCDC184Q52MB2 194 aa7.04□□□□□ -1.28
RNU1-149P-201ENST00000390870 MSL1Q68DK7 614 aa7.04□□□□□ -1.28
RNU1-149P-201ENST00000390870 ZNF790Q6PG37 636 aa7.04□□□□□ -1.28
RNU1-149P-201ENST00000390870 SMIM5Q71RC9 77 aa7.04□□□□□ -1.28
RNU1-149P-201ENST00000390870 COL23A1Q86Y22 540 aaPredicted RBP7.04□□□□□ -1.28
RNU1-149P-201ENST00000390870 DNAJC10Q8IXB1 793 aa7.04□□□□□ -1.28
RNU1-149P-201ENST00000390870 LARGE2Q8N3Y3 721 aa7.04□□□□□ -1.28
RNU1-149P-201ENST00000390870 FLAD1Q8NFF5 587 aa7.04□□□□□ -1.28
RNU1-149P-201ENST00000390870 KCTD15Q96SI1 283 aaPredicted RBP7.04□□□□□ -1.28
RNU1-149P-201ENST00000390870 THUMPD2Q9BTF0 503 aaKnown RBP7.04□□□□□ -1.28
RNU1-149P-201ENST00000390870 PCDH10Q9P2E7 1040 aa7.04□□□□□ -1.28
RNU1-149P-201ENST00000390870 RTCBQ9Y3I0 505 aaKnown RBP7.04□□□□□ -1.28
RNU1-149P-201ENST00000390870 IVNS1ABPQ9Y6Y0 642 aa7.04□□□□□ -1.28
RNU1-149P-201ENST00000390870 TMPOP42166 694 aaKnown RBP7.03□□□□□ -1.28
RNU1-149P-201ENST00000390870 WNT7BP56706 349 aa7.03□□□□□ -1.28
RNU1-149P-201ENST00000390870 SKOR1P84550 965 aa7.03□□□□□ -1.28
RNU1-149P-201ENST00000390870 USP4Q13107 963 aa7.03□□□□□ -1.28
RNU1-149P-201ENST00000390870 PPP1R18Q6NYC8 613 aa7.03□□□□□ -1.28
RNU1-149P-201ENST00000390870 VASH1Q7L8A9 365 aaPredicted RBP7.03□□□□□ -1.28
RNU1-149P-201ENST00000390870 AMIGO3Q86WK7 504 aa7.03□□□□□ -1.28
RNU1-149P-201ENST00000390870 EHBP1Q8NDI1 1231 aa7.03□□□□□ -1.28
RNU1-149P-201ENST00000390870 SLC16A10Q8TF71 515 aa7.03□□□□□ -1.28
RNU1-149P-201ENST00000390870 ZNF496Q96IT1 587 aaPredicted RBP7.03□□□□□ -1.28
RNU1-149P-201ENST00000390870 FMNL2Q96PY5 1086 aa7.03□□□□□ -1.28
RNU1-149P-201ENST00000390870 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.03□□□□□ -1.28
RNU1-149P-201ENST00000390870 COL24A1Q17RW2 1714 aa7.03□□□□□ -1.28
RNU1-149P-201ENST00000390870 HEG1Q9ULI3 1381 aa7.03□□□□□ -1.28
RNU1-149P-201ENST00000390870 SENP3-EIF4A1A0A087X0R7 540 aa7.02□□□□□ -1.29
RNU1-149P-201ENST00000390870 KCNQ3O43525 872 aa7.02□□□□□ -1.29
RNU1-149P-201ENST00000390870 CD2BP2O95400 341 aaKnown RBP7.02□□□□□ -1.29
RNU1-149P-201ENST00000390870 RFC4P35249 363 aa7.02□□□□□ -1.29
RNU1-149P-201ENST00000390870 RPIAP49247 311 aa7.02□□□□□ -1.29
RNU1-149P-201ENST00000390870 ARID5BQ14865 1188 aa7.02□□□□□ -1.29
RNU1-149P-201ENST00000390870 TAF7Q15545 349 aaPredicted RBP7.02□□□□□ -1.29
RNU1-149P-201ENST00000390870 TRAPPC3LQ5T215 181 aa7.02□□□□□ -1.29
RNU1-149P-201ENST00000390870 NPM2Q86SE8 214 aaKnown RBP7.02□□□□□ -1.29
RNU1-149P-201ENST00000390870 PNISRQ8TF01 805 aaKnown RBP7.02□□□□□ -1.29
RNU1-149P-201ENST00000390870 CCDC87Q9NVE4 849 aa7.02□□□□□ -1.29
RNU1-149P-201ENST00000390870 MIS18AQ9NYP9 233 aa7.02□□□□□ -1.29
RNU1-149P-201ENST00000390870 TSPYL4Q9UJ04 414 aa7.02□□□□□ -1.29
RNU1-149P-201ENST00000390870 LAS1LQ9Y4W2 734 aaKnown RBP7.02□□□□□ -1.29
RNU1-149P-201ENST00000390870 SCN7AQ01118 1682 aa7.01□□□□□ -1.29
RNU1-149P-201ENST00000390870 COL15A1P39059 1388 aa7.01□□□□□ -1.29
RNU1-149P-201ENST00000390870 APAF1O14727 1248 aa7.01□□□□□ -1.29
RNU1-149P-201ENST00000390870 ZBTB7BO15156 539 aaPredicted RBP7.01□□□□□ -1.29
RNU1-149P-201ENST00000390870 RPS6KA4O75676 772 aa7.01□□□□□ -1.29
RNU1-149P-201ENST00000390870 STARD3NLO95772 234 aa7.01□□□□□ -1.29
RNU1-149P-201ENST00000390870 MYCP01106 439 aaPredicted RBP7.01□□□□□ -1.29
RNU1-149P-201ENST00000390870 CANXP27824 592 aaKnown RBP7.01□□□□□ -1.29
RNU1-149P-201ENST00000390870 RC3H1Q5TC82 1133 aaKnown RBP7.01□□□□□ -1.29
RNU1-149P-201ENST00000390870 CCDC102BQ68D86 513 aa7.01□□□□□ -1.29
RNU1-149P-201ENST00000390870 SPNS2Q8IVW8 549 aa7.01□□□□□ -1.29
RNU1-149P-201ENST00000390870 FAM9BQ8IZU0 186 aa7.01□□□□□ -1.29
RNU1-149P-201ENST00000390870 TPCN2Q8NHX9 752 aa7.01□□□□□ -1.29
RNU1-149P-201ENST00000390870 CLP1Q92989 425 aaKnown RBP7.01□□□□□ -1.29
RNU1-149P-201ENST00000390870 KIAA1024Q9UPX6 916 aa7.01□□□□□ -1.29
RNU1-149P-201ENST00000390870 ZBTB1Q9Y2K1 713 aa7.01□□□□□ -1.29
RNU1-149P-201ENST00000390870 PRAMEF22A3QJZ6 481 aa7□□□□□ -1.29
RNU1-149P-201ENST00000390870 SNRPA1P09661 255 aaKnown RBP7□□□□□ -1.29
RNU1-149P-201ENST00000390870 CYP19A1P11511 503 aaPredicted RBP7□□□□□ -1.29
RNU1-149P-201ENST00000390870 MFAP1P55081 439 aaKnown RBP7□□□□□ -1.29
RNU1-149P-201ENST00000390870 SEC13P55735 322 aa7□□□□□ -1.29
RNU1-149P-201ENST00000390870 SIX5Q8N196 739 aa7□□□□□ -1.29
RNU1-149P-201ENST00000390870 TEX13AQ9BXU3 409 aaPredicted RBP7□□□□□ -1.29
RNU1-149P-201ENST00000390870 FHDC1Q9C0D6 1143 aaPredicted RBP7□□□□□ -1.29
RNU1-149P-201ENST00000390870 MAP4K5Q9Y4K4 846 aa7□□□□□ -1.29
RNU1-149P-201ENST00000390870 BCORQ6W2J9 1755 aa7□□□□□ -1.29
RNU1-149P-201ENST00000390870 SOS1Q07889 1333 aaPredicted RBP7□□□□□ -1.29
RNU1-149P-201ENST00000390870 ERVH48-1M5A8F1 160 aa6.99□□□□□ -1.29
RNU1-149P-201ENST00000390870 ATP2B4P23634 1241 aa6.99□□□□□ -1.29
RNU1-149P-201ENST00000390870 PIP4K2AP48426 406 aaPredicted RBP6.99□□□□□ -1.29
RNU1-149P-201ENST00000390870 SWI5Q1ZZU3 235 aa6.99□□□□□ -1.29
RNU1-149P-201ENST00000390870 INTS6LQ5JSJ4 861 aaKnown RBP6.99□□□□□ -1.29
RNU1-149P-201ENST00000390870 INTS5Q6P9B9 1019 aaKnown RBP6.99□□□□□ -1.29
RNU1-149P-201ENST00000390870 SRP68Q9UHB9 627 aaKnown RBP6.99□□□□□ -1.29
RNU1-149P-201ENST00000390870 PCDHGA11Q9Y5H2 935 aa6.99□□□□□ -1.29
RNU1-149P-201ENST00000390870 USP42Q9H9J4 1324 aaKnown RBP6.99□□□□□ -1.29
RNU1-149P-201ENST00000390870 A0A087WZG4 1122 aa6.98□□□□□ -1.29
RNU1-149P-201ENST00000390870 SFI1A8K8P3 1242 aa6.98□□□□□ -1.29
RNU1-149P-201ENST00000390870 A1BGP04217 495 aa6.98□□□□□ -1.29
RNU1-149P-201ENST00000390870 MMP10P09238 476 aa6.98□□□□□ -1.29
RNU1-149P-201ENST00000390870 EIF4A1P60842 406 aaKnown RBP6.98□□□□□ -1.29
RNU1-149P-201ENST00000390870 CALD1Q05682 793 aaKnown RBP6.98□□□□□ -1.29
RNU1-149P-201ENST00000390870 USPL1Q5W0Q7 1092 aa6.98□□□□□ -1.29
RNU1-149P-201ENST00000390870 DIEXFQ68CQ4 756 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms