RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 MSL1Q68DK7 614 aa12.09□□□□□ -0.47
LTN1-203ENST00000389195 GPT2Q8TD30 523 aa12.09□□□□□ -0.47
LTN1-203ENST00000389195 CWC22Q9HCG8 908 aaKnown RBP12.09□□□□□ -0.47
LTN1-203ENST00000389195 GJB4Q9NTQ9 266 aa12.09□□□□□ -0.47
LTN1-203ENST00000389195 LMBRD1Q9NUN5 540 aa12.09□□□□□ -0.47
LTN1-203ENST00000389195 BRD1O95696 1058 aa12.09□□□□□ -0.47
LTN1-203ENST00000389195 CCDC144CPQ8IYA2 1237 aa12.09□□□□□ -0.47
LTN1-203ENST00000389195 IL27Q8NEV9 243 aa12.09□□□□□ -0.47
LTN1-203ENST00000389195 SDR42E1Q8WUS8 393 aa12.09□□□□□ -0.47
LTN1-203ENST00000389195 NLRP3Q96P20 1036 aa12.09□□□□□ -0.47
LTN1-203ENST00000389195 HELLSQ9NRZ9 838 aa12.09□□□□□ -0.47
LTN1-203ENST00000389195 MROH5Q6ZUA9 1318 aa12.08□□□□□ -0.47
LTN1-203ENST00000389195 AKAP11Q9UKA4 1901 aa12.08□□□□□ -0.48
LTN1-203ENST00000389195 ADD2P35612 726 aa12.08□□□□□ -0.48
LTN1-203ENST00000389195 MCM2P49736 904 aa12.08□□□□□ -0.48
LTN1-203ENST00000389195 GUCY1B3Q02153 619 aa12.08□□□□□ -0.48
LTN1-203ENST00000389195 CTDSPL2Q05D32 466 aa12.08□□□□□ -0.48
LTN1-203ENST00000389195 CLEC4GQ6UXB4 293 aa12.08□□□□□ -0.48
LTN1-203ENST00000389195 VPS37DQ86XT2 251 aa12.08□□□□□ -0.48
LTN1-203ENST00000389195 LRP2BPQ9P2M1 347 aa12.08□□□□□ -0.48
LTN1-203ENST00000389195 U3KPZ7 1027 aaPredicted RBP12.08□□□□□ -0.48
LTN1-203ENST00000389195 CNTNAP4Q9C0A0 1308 aa12.08□□□□□ -0.48
LTN1-203ENST00000389195 DDX60Q8IY21 1712 aaKnown RBP12.08□□□□□ -0.48
LTN1-203ENST00000389195 CYP2D7A0A087X1C5 515 aa12.08□□□□□ -0.48
LTN1-203ENST00000389195 MBD4O95243 580 aa12.08□□□□□ -0.48
LTN1-203ENST00000389195 RPS8P62241 208 aaKnown RBP12.08□□□□□ -0.48
LTN1-203ENST00000389195 ZKSCAN3Q9BRR0 538 aa12.08□□□□□ -0.48
LTN1-203ENST00000389195 NBPF3Q9H094 633 aa12.08□□□□□ -0.48
LTN1-203ENST00000389195 TACC3Q9Y6A5 838 aa12.08□□□□□ -0.48
LTN1-203ENST00000389195 DDX11L8A8MPP1 907 aa12.07□□□□□ -0.48
LTN1-203ENST00000389195 PSMA5P28066 241 aa12.07□□□□□ -0.48
LTN1-203ENST00000389195 TPTE2Q6XPS3 522 aa12.07□□□□□ -0.48
LTN1-203ENST00000389195 CDC37L1Q7L3B6 337 aa12.07□□□□□ -0.48
LTN1-203ENST00000389195 LCORLQ8N3X6 602 aa12.07□□□□□ -0.48
LTN1-203ENST00000389195 APPBP2Q92624 585 aa12.07□□□□□ -0.48
LTN1-203ENST00000389195 BCL11BQ9C0K0 894 aaPredicted RBP12.07□□□□□ -0.48
LTN1-203ENST00000389195 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.07□□□□□ -0.48
LTN1-203ENST00000389195 FIBPO43427 364 aa12.07□□□□□ -0.48
LTN1-203ENST00000389195 STX6O43752 255 aa12.07□□□□□ -0.48
LTN1-203ENST00000389195 SCRN1Q12765 414 aa12.07□□□□□ -0.48
LTN1-203ENST00000389195 IL17RAQ96F46 866 aa12.07□□□□□ -0.48
LTN1-203ENST00000389195 FAM84BQ96KN1 310 aaPredicted RBP12.07□□□□□ -0.48
LTN1-203ENST00000389195 MYL10Q9BUA6 226 aa12.07□□□□□ -0.48
LTN1-203ENST00000389195 UBE2Q2LH0YL09 131 aa12.06□□□□□ -0.48
LTN1-203ENST00000389195 ONECUT3O60422 494 aaPredicted RBP12.06□□□□□ -0.48
LTN1-203ENST00000389195 TM4SF1P30408 202 aa12.06□□□□□ -0.48
LTN1-203ENST00000389195 DYNLL1P63167 89 aaKnown RBP12.06□□□□□ -0.48
LTN1-203ENST00000389195 DNM1Q05193 864 aaKnown RBP12.06□□□□□ -0.48
LTN1-203ENST00000389195 RRP12Q5JTH9 1297 aaKnown RBP12.06□□□□□ -0.48
LTN1-203ENST00000389195 OTUD7BQ6GQQ9 843 aa12.06□□□□□ -0.48
LTN1-203ENST00000389195 TBC1D10CQ8IV04 446 aa12.06□□□□□ -0.48
LTN1-203ENST00000389195 TM6SF1Q9BZW5 370 aa12.06□□□□□ -0.48
LTN1-203ENST00000389195 RAI14Q9P0K7 980 aa12.06□□□□□ -0.48
LTN1-203ENST00000389195 TFIP11Q9UBB9 837 aaKnown RBP12.06□□□□□ -0.48
LTN1-203ENST00000389195 TCRBV5S4A2TA0A5A2 114 aa12.06□□□□□ -0.48
LTN1-203ENST00000389195 CEBPZQ03701 1054 aaKnown RBP12.06□□□□□ -0.48
LTN1-203ENST00000389195 LARP1BQ659C4 914 aaKnown RBP12.06□□□□□ -0.48
LTN1-203ENST00000389195 AIDAQ96BJ3 306 aa12.06□□□□□ -0.48
LTN1-203ENST00000389195 CDC5LQ99459 802 aaKnown RBP12.06□□□□□ -0.48
LTN1-203ENST00000389195 TOMM22Q9NS69 142 aa12.06□□□□□ -0.48
LTN1-203ENST00000389195 ANKIB1Q9P2G1 1089 aa12.06□□□□□ -0.48
LTN1-203ENST00000389195 FBXO3Q9UK99 471 aa12.06□□□□□ -0.48
LTN1-203ENST00000389195 COL5A3P25940 1745 aaPredicted RBP12.06□□□□□ -0.48
LTN1-203ENST00000389195 B4E1Z4 1266 aa12.05□□□□□ -0.48
LTN1-203ENST00000389195 APBA3O96018 575 aa12.05□□□□□ -0.48
LTN1-203ENST00000389195 GYS1P13807 737 aa12.05□□□□□ -0.48
LTN1-203ENST00000389195 ARID4AP29374 1257 aaPredicted RBP12.05□□□□□ -0.48
LTN1-203ENST00000389195 TXNRD1Q16881 649 aa12.05□□□□□ -0.48
LTN1-203ENST00000389195 ZNF827Q17R98 1081 aa12.05□□□□□ -0.48
LTN1-203ENST00000389195 ZNF384Q8TF68 577 aa12.05□□□□□ -0.48
LTN1-203ENST00000389195 INTS4Q96HW7 963 aaKnown RBP12.05□□□□□ -0.48
LTN1-203ENST00000389195 PCNTO95613 3336 aa12.05□□□□□ -0.48
LTN1-203ENST00000389195 CARMIL3Q8ND23 1372 aa12.05□□□□□ -0.48
LTN1-203ENST00000389195 GRIK5Q16478 980 aa12.05□□□□□ -0.48
LTN1-203ENST00000389195 USP48Q86UV5 1035 aa12.05□□□□□ -0.48
LTN1-203ENST00000389195 DSCC1Q9BVC3 393 aa12.05□□□□□ -0.48
LTN1-203ENST00000389195 EPB41L4AQ9HCS5 686 aaPredicted RBP12.05□□□□□ -0.48
LTN1-203ENST00000389195 ZNF213O14771 459 aa12.04□□□□□ -0.48
LTN1-203ENST00000389195 SF3B3Q15393 1217 aaKnown RBP12.04□□□□□ -0.48
LTN1-203ENST00000389195 PRR5LQ6MZQ0 368 aa12.04□□□□□ -0.48
LTN1-203ENST00000389195 DHX32Q7L7V1 743 aaKnown RBP12.04□□□□□ -0.48
LTN1-203ENST00000389195 CNBD1Q8NA66 436 aa12.04□□□□□ -0.48
LTN1-203ENST00000389195 BSDC1Q9NW68 430 aaPredicted RBP12.04□□□□□ -0.48
LTN1-203ENST00000389195 ZNF219Q9P2Y4 722 aaPredicted RBP12.04□□□□□ -0.48
LTN1-203ENST00000389195 ATRNO75882 1429 aa12.04□□□□□ -0.48
LTN1-203ENST00000389195 PRDM1O75626 825 aa12.04□□□□□ -0.48
LTN1-203ENST00000389195 PRDX5P30044 214 aa12.04□□□□□ -0.48
LTN1-203ENST00000389195 ANTXR2P58335 489 aa12.04□□□□□ -0.48
LTN1-203ENST00000389195 RC3H1Q5TC82 1133 aaKnown RBP12.04□□□□□ -0.48
LTN1-203ENST00000389195 CYB5R4Q7L1T6 521 aa12.04□□□□□ -0.48
LTN1-203ENST00000389195 CMTR1Q8N1G2 835 aaKnown RBP12.04□□□□□ -0.48
LTN1-203ENST00000389195 CCDC82Q8N4S0 544 aa12.04□□□□□ -0.48
LTN1-203ENST00000389195 STRBPQ96SI9 672 aaKnown RBP12.04□□□□□ -0.48
LTN1-203ENST00000389195 FTOQ9C0B1 505 aaKnown RBP eCLIP12.04□□□□□ -0.48
LTN1-203ENST00000389195 PDGFDQ9GZP0 370 aaPredicted RBP12.04□□□□□ -0.48
LTN1-203ENST00000389195 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.04□□□□□ -0.481e-6■■□□□ 12.5
LTN1-203ENST00000389195 MTMR6Q9Y217 621 aa12.04□□□□□ -0.48
LTN1-203ENST00000389195 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.04□□□□□ -0.48
LTN1-203ENST00000389195 COL1A1P02452 1464 aaPredicted RBP12.04□□□□□ -0.48
LTN1-203ENST00000389195 MINDY4BA8MYZ0 360 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms