RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 GPR108Q9NPR9 543 aa16.32■□□□□ 0.2
NEK4-202ENST00000383721 HELLSQ9NRZ9 838 aa16.32■□□□□ 0.2
NEK4-202ENST00000383721 CCDC87Q9NVE4 849 aa16.32■□□□□ 0.2
NEK4-202ENST00000383721 NSUN7Q8NE18 718 aaKnown RBP16.31■□□□□ 0.2
NEK4-202ENST00000383721 KIAA1524Q8TCG1 905 aa16.31■□□□□ 0.2
NEK4-202ENST00000383721 ZSCAN16Q9H4T2 348 aaPredicted RBP16.31■□□□□ 0.2
NEK4-202ENST00000383721 CBX8Q9HC52 389 aa16.31■□□□□ 0.2
NEK4-202ENST00000383721 PYCARDQ9ULZ3 195 aa16.31■□□□□ 0.2
NEK4-202ENST00000383721 A0A0G2JLW4 131 aa16.31■□□□□ 0.2
NEK4-202ENST00000383721 HMGB1P09429 215 aaKnown RBP16.31■□□□□ 0.2
NEK4-202ENST00000383721 IL15P40933 162 aaPredicted RBP16.31■□□□□ 0.2
NEK4-202ENST00000383721 FGD1P98174 961 aa16.31■□□□□ 0.2
NEK4-202ENST00000383721 LRRC24Q50LG9 513 aa16.31■□□□□ 0.2
NEK4-202ENST00000383721 ZMYM1Q5SVZ6 1142 aa16.31■□□□□ 0.2
NEK4-202ENST00000383721 MYRIPQ8NFW9 859 aa16.31■□□□□ 0.2
NEK4-202ENST00000383721 BICD2Q8TD16 824 aa16.31■□□□□ 0.2
NEK4-202ENST00000383721 LLPHQ9BRT6 129 aaKnown RBP16.31■□□□□ 0.2
NEK4-202ENST00000383721 DSCC1Q9BVC3 393 aa16.31■□□□□ 0.2
NEK4-202ENST00000383721 C4BP0C0L5 1744 aa16.3■□□□□ 0.2
NEK4-202ENST00000383721 CTDNEP1O95476 244 aa16.3■□□□□ 0.2
NEK4-202ENST00000383721 EXOSC10Q01780 885 aaKnown RBP16.3■□□□□ 0.2
NEK4-202ENST00000383721 ZNF827Q17R98 1081 aa16.3■□□□□ 0.2
NEK4-202ENST00000383721 GNPATO15228 680 aa16.3■□□□□ 0.2
NEK4-202ENST00000383721 TPM3P06753 285 aa16.3■□□□□ 0.2
NEK4-202ENST00000383721 ADD1P35611 737 aaKnown RBP16.3■□□□□ 0.2
NEK4-202ENST00000383721 APOBRQ0VD83 1088 aa16.3■□□□□ 0.2
NEK4-202ENST00000383721 ZNF594Q96JF6 807 aaPredicted RBP16.3■□□□□ 0.2
NEK4-202ENST00000383721 AGXT2Q9BYV1 514 aa16.3■□□□□ 0.2
NEK4-202ENST00000383721 RGPD3A6NKT7 1758 aaPredicted RBP16.29■□□□□ 0.2
NEK4-202ENST00000383721 RGPD4Q7Z3J3 1758 aa16.29■□□□□ 0.2
NEK4-202ENST00000383721 EYA2O00167 538 aa16.29■□□□□ 0.2
NEK4-202ENST00000383721 PRIMPOLQ96LW4 560 aa16.29■□□□□ 0.2
NEK4-202ENST00000383721 CNTNAP4Q9C0A0 1308 aa16.29■□□□□ 0.2
NEK4-202ENST00000383721 HSPD1P10809 573 aaKnown RBP16.29■□□□□ 0.2
NEK4-202ENST00000383721 ZBTB3Q9H5J0 574 aa16.29■□□□□ 0.2
NEK4-202ENST00000383721 CFAP45Q9UL16 551 aa16.29■□□□□ 0.2
NEK4-202ENST00000383721 MAST3O60307 1309 aa16.28■□□□□ 0.2
NEK4-202ENST00000383721 GOLGA6L6A8MZA4 724 aa16.28■□□□□ 0.2
NEK4-202ENST00000383721 NAA16Q6N069 864 aaPredicted RBP16.28■□□□□ 0.2
NEK4-202ENST00000383721 MAP7D2Q96T17 732 aa16.28■□□□□ 0.2
NEK4-202ENST00000383721 PTPDC1A2A3K4 754 aa16.28■□□□□ 0.2
NEK4-202ENST00000383721 E7EWF7 191 aa16.28■□□□□ 0.2
NEK4-202ENST00000383721 TICAM2Q86XR7 235 aa16.28■□□□□ 0.2
NEK4-202ENST00000383721 A0A1B0GUL7 405 aa16.27■□□□□ 0.2
NEK4-202ENST00000383721 IFIT1P09914 478 aaKnown RBP16.27■□□□□ 0.2
NEK4-202ENST00000383721 FOSBP53539 338 aa16.27■□□□□ 0.2
NEK4-202ENST00000383721 CCT2P78371 535 aaKnown RBP16.27■□□□□ 0.2
NEK4-202ENST00000383721 CEBPZQ03701 1054 aaKnown RBP16.27■□□□□ 0.2
NEK4-202ENST00000383721 CCDC191Q8NCU4 936 aa16.27■□□□□ 0.2
NEK4-202ENST00000383721 AK7Q96M32 723 aa16.27■□□□□ 0.2
NEK4-202ENST00000383721 PUS3Q9BZE2 481 aaKnown RBP16.27■□□□□ 0.2
NEK4-202ENST00000383721 RNF113AO15541 343 aaKnown RBP16.27■□□□□ 0.19
NEK4-202ENST00000383721 PTGS1P23219 599 aa16.27■□□□□ 0.19
NEK4-202ENST00000383721 EIF5P55010 431 aaKnown RBP16.27■□□□□ 0.19
NEK4-202ENST00000383721 RC3H1Q5TC82 1133 aaKnown RBP16.27■□□□□ 0.19
NEK4-202ENST00000383721 TDRD7Q8NHU6 1098 aaKnown RBP16.27■□□□□ 0.19
NEK4-202ENST00000383721 FTOQ9C0B1 505 aaKnown RBP eCLIP16.27■□□□□ 0.19
NEK4-202ENST00000383721 DNAJC25Q9H1X3 360 aa16.27■□□□□ 0.19
NEK4-202ENST00000383721 NCOA5Q9HCD5 579 aaKnown RBP16.27■□□□□ 0.19
NEK4-202ENST00000383721 RREB1Q92766 1687 aa16.26■□□□□ 0.19
NEK4-202ENST00000383721 HMGN5P82970 282 aaKnown RBP16.26■□□□□ 0.19
NEK4-202ENST00000383721 AKT1S1Q96B36 256 aa16.26■□□□□ 0.19
NEK4-202ENST00000383721 RCOR1Q9UKL0 485 aa16.26■□□□□ 0.19
NEK4-202ENST00000383721 SALL1Q9NSC2 1324 aa16.26■□□□□ 0.19
NEK4-202ENST00000383721 CIAO1O76071 339 aa16.26■□□□□ 0.19
NEK4-202ENST00000383721 ZNF165P49910 485 aa16.26■□□□□ 0.19
NEK4-202ENST00000383721 TBC1D2BQ9UPU7 963 aa16.26■□□□□ 0.19
NEK4-202ENST00000383721 NUP188Q5SRE5 1749 aa16.25■□□□□ 0.19
NEK4-202ENST00000383721 M0R2C6 588 aa16.25■□□□□ 0.19
NEK4-202ENST00000383721 IL6STP40189 918 aaPredicted RBP16.25■□□□□ 0.19
NEK4-202ENST00000383721 TTLL5Q6EMB2 1281 aa16.25■□□□□ 0.19
NEK4-202ENST00000383721 CHST3Q7LGC8 479 aa16.25■□□□□ 0.19
NEK4-202ENST00000383721 PLA2G4DQ86XP0 818 aa16.25■□□□□ 0.19
NEK4-202ENST00000383721 PPFIA3O75145 1194 aa16.25■□□□□ 0.19
NEK4-202ENST00000383721 RPS6KA4O75676 772 aa16.25■□□□□ 0.19
NEK4-202ENST00000383721 PDIA3P30101 505 aaKnown RBP16.25■□□□□ 0.19
NEK4-202ENST00000383721 GTF2F1P35269 517 aaKnown RBP eCLIP16.25■□□□□ 0.19
NEK4-202ENST00000383721 ZNF75DP51815 510 aa16.25■□□□□ 0.19
NEK4-202ENST00000383721 OSBP2Q969R2 916 aa16.25■□□□□ 0.19
NEK4-202ENST00000383721 CCDC186Q7Z3E2 898 aa16.24■□□□□ 0.19
NEK4-202ENST00000383721 TSC1Q92574 1164 aa16.24■□□□□ 0.19
NEK4-202ENST00000383721 USP28Q96RU2 1077 aa16.24■□□□□ 0.19
NEK4-202ENST00000383721 TFCP2L1Q9NZI6 479 aa16.24■□□□□ 0.19
NEK4-202ENST00000383721 RTCBQ9Y3I0 505 aaKnown RBP16.24■□□□□ 0.19
NEK4-202ENST00000383721 ZNF274Q96GC6 653 aaPredicted RBP16.24■□□□□ 0.19
NEK4-202ENST00000383721 TRIM5Q9C035 493 aa16.24■□□□□ 0.19
NEK4-202ENST00000383721 GOLPH3LQ9H4A5 285 aa16.24■□□□□ 0.19
NEK4-202ENST00000383721 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.23■□□□□ 0.19
NEK4-202ENST00000383721 CCAR1Q8IX12 1150 aaKnown RBP16.23■□□□□ 0.19
NEK4-202ENST00000383721 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.23■□□□□ 0.19
NEK4-202ENST00000383721 NRBP1Q9UHY1 535 aa16.23■□□□□ 0.19
NEK4-202ENST00000383721 NAP1L2Q9ULW6 460 aaPredicted RBP16.23■□□□□ 0.19
NEK4-202ENST00000383721 LAMA4Q16363 1823 aa16.23■□□□□ 0.19
NEK4-202ENST00000383721 FOXP2O15409 715 aa16.23■□□□□ 0.19
NEK4-202ENST00000383721 MTERF4Q7Z6M4 381 aaKnown RBP16.23■□□□□ 0.19
NEK4-202ENST00000383721 ARHGEF1Q92888 912 aaKnown RBP16.23■□□□□ 0.19
NEK4-202ENST00000383721 CEP126Q9P2H0 1117 aa16.23■□□□□ 0.19
NEK4-202ENST00000383721 KIF3AQ9Y496 699 aa16.23■□□□□ 0.19
NEK4-202ENST00000383721 UBR3Q6ZT12 1888 aa16.23■□□□□ 0.19
NEK4-202ENST00000383721 ADORA1P30542 326 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms