RNA–Protein interactions for RNA: ENST00000382020.8

TUSC3-201, Transcript of tumor suppressor candidate 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUSC3, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-201ENST00000382020 AATKQ6ZMQ8 1374 aa17.11■□□□□ 0.33
TUSC3-201ENST00000382020 PLEKHG3A1L390 1219 aa17.11■□□□□ 0.33
TUSC3-201ENST00000382020 RAD21O60216 631 aa17.11■□□□□ 0.33
TUSC3-201ENST00000382020 POLA2Q14181 598 aa17.11■□□□□ 0.33
TUSC3-201ENST00000382020 PUS3Q9BZE2 481 aaKnown RBP17.11■□□□□ 0.33
TUSC3-201ENST00000382020 VPS18Q9P253 973 aa17.11■□□□□ 0.33
TUSC3-201ENST00000382020 MAPK8IP1Q9UQF2 711 aa17.11■□□□□ 0.33
TUSC3-201ENST00000382020 E7EWF7 191 aa17.1■□□□□ 0.33
TUSC3-201ENST00000382020 GSDMDP57764 484 aa17.1■□□□□ 0.33
TUSC3-201ENST00000382020 ZNF790Q6PG37 636 aa17.1■□□□□ 0.33
TUSC3-201ENST00000382020 JMYQ8N9B5 988 aa17.1■□□□□ 0.33
TUSC3-201ENST00000382020 TM6SF1Q9BZW5 370 aa17.1■□□□□ 0.33
TUSC3-201ENST00000382020 PTPRMP28827 1452 aa17.1■□□□□ 0.33
TUSC3-201ENST00000382020 A0A1B0GUL7 405 aa17.1■□□□□ 0.33
TUSC3-201ENST00000382020 B4E1Z4 1266 aa17.1■□□□□ 0.33
TUSC3-201ENST00000382020 FANCCQ00597 558 aa17.1■□□□□ 0.33
TUSC3-201ENST00000382020 LRRFIP1Q32MZ4 808 aaKnown RBP17.1■□□□□ 0.33
TUSC3-201ENST00000382020 AMOTQ4VCS5 1084 aa17.1■□□□□ 0.33
TUSC3-201ENST00000382020 RAI14Q9P0K7 980 aa17.1■□□□□ 0.33
TUSC3-201ENST00000382020 VIRMAQ69YN4 1812 aaKnown RBP17.1■□□□□ 0.33
TUSC3-201ENST00000382020 ST3GAL1Q11201 340 aa17.1■□□□□ 0.33
TUSC3-201ENST00000382020 LDHAL6AQ6ZMR3 332 aa17.1■□□□□ 0.33
TUSC3-201ENST00000382020 CAGE1Q8TC20 777 aa17.1■□□□□ 0.33
TUSC3-201ENST00000382020 DEF6Q9H4E7 631 aa17.1■□□□□ 0.33
TUSC3-201ENST00000382020 CDK12Q9NYV4 1490 aaPredicted RBP17.1■□□□□ 0.33
TUSC3-201ENST00000382020 AOX1Q06278 1338 aa17.1■□□□□ 0.33
TUSC3-201ENST00000382020 MYO3AQ8NEV4 1616 aa17.1■□□□□ 0.33
TUSC3-201ENST00000382020 SSH2Q76I76 1423 aa17.09■□□□□ 0.33
TUSC3-201ENST00000382020 CD163L1Q9NR16 1453 aa17.09■□□□□ 0.33
TUSC3-201ENST00000382020 NEMFO60524 1076 aa17.09■□□□□ 0.33
TUSC3-201ENST00000382020 NAP1L1P55209 391 aaKnown RBP17.09■□□□□ 0.33
TUSC3-201ENST00000382020 NEURL1BA8MQ27 555 aa17.09■□□□□ 0.33
TUSC3-201ENST00000382020 KIF2AO00139 706 aaPredicted RBP17.09■□□□□ 0.33
TUSC3-201ENST00000382020 IARSP41252 1262 aaKnown RBP17.09■□□□□ 0.33
TUSC3-201ENST00000382020 SLC9C2Q5TAH2 1124 aa17.09■□□□□ 0.33
TUSC3-201ENST00000382020 TBC1D2BQ9UPU7 963 aa17.09■□□□□ 0.33
TUSC3-201ENST00000382020 MTX1Q13505 466 aa17.09■□□□□ 0.33
TUSC3-201ENST00000382020 TSR1Q2NL82 804 aaKnown RBP17.09■□□□□ 0.33
TUSC3-201ENST00000382020 TMEM67Q5HYA8 995 aa17.09■□□□□ 0.33
TUSC3-201ENST00000382020 AXDND1Q5T1B0 1012 aaPredicted RBP17.09■□□□□ 0.33
TUSC3-201ENST00000382020 IP6K1Q92551 441 aa17.09■□□□□ 0.33
TUSC3-201ENST00000382020 ARFGAP3Q9NP61 516 aa17.09■□□□□ 0.33
TUSC3-201ENST00000382020 ERCC3P19447 782 aa17.08■□□□□ 0.33
TUSC3-201ENST00000382020 HOOK1Q9UJC3 728 aaKnown RBP17.08■□□□□ 0.33
TUSC3-201ENST00000382020 VPS37DQ86XT2 251 aa17.08■□□□□ 0.32
TUSC3-201ENST00000382020 KCNJ14Q9UNX9 436 aa17.08■□□□□ 0.32
TUSC3-201ENST00000382020 TTLL7Q6ZT98 887 aa17.08■□□□□ 0.32
TUSC3-201ENST00000382020 KCNH5Q8NCM2 988 aa17.08■□□□□ 0.32
TUSC3-201ENST00000382020 NSUN7Q8NE18 718 aaKnown RBP17.08■□□□□ 0.32
TUSC3-201ENST00000382020 INCENPQ9NQS7 918 aa17.08■□□□□ 0.32
TUSC3-201ENST00000382020 MAP2P11137 1827 aaKnown RBP17.08■□□□□ 0.32
TUSC3-201ENST00000382020 HMGB1P09429 215 aaKnown RBP17.07■□□□□ 0.32
TUSC3-201ENST00000382020 PNMA6AP0CW24 399 aaPredicted RBP17.07■□□□□ 0.32
TUSC3-201ENST00000382020 TMEM87AQ8NBN3 555 aa17.07■□□□□ 0.32
TUSC3-201ENST00000382020 TDRD7Q8NHU6 1098 aaKnown RBP17.07■□□□□ 0.32
TUSC3-201ENST00000382020 NAPBQ9H115 298 aa17.07■□□□□ 0.32
TUSC3-201ENST00000382020 PLEKHA4Q9H4M7 779 aa17.07■□□□□ 0.32
TUSC3-201ENST00000382020 CRB1P82279 1406 aa17.07■□□□□ 0.32
TUSC3-201ENST00000382020 ST5P78524 1137 aa17.07■□□□□ 0.32
TUSC3-201ENST00000382020 RESTQ13127 1097 aa17.07■□□□□ 0.32
TUSC3-201ENST00000382020 GRAMD1CQ8IYS0 662 aa17.07■□□□□ 0.32
TUSC3-201ENST00000382020 MIGA1Q8NAN2 632 aa17.07■□□□□ 0.32
TUSC3-201ENST00000382020 FAM170AA1A519 330 aa17.07■□□□□ 0.32
TUSC3-201ENST00000382020 RBM6P78332 1123 aaKnown RBP17.07■□□□□ 0.32
TUSC3-201ENST00000382020 ENOX2Q16206 610 aaKnown RBP17.07■□□□□ 0.32
TUSC3-201ENST00000382020 CCDC102BQ68D86 513 aa17.07■□□□□ 0.32
TUSC3-201ENST00000382020 KRT28Q7Z3Y7 464 aa17.07■□□□□ 0.32
TUSC3-201ENST00000382020 DHX58Q96C10 678 aa17.07■□□□□ 0.32
TUSC3-201ENST00000382020 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.07■□□□□ 0.32
TUSC3-201ENST00000382020 SNRPA1P09661 255 aaKnown RBP17.06■□□□□ 0.32
TUSC3-201ENST00000382020 TRIM22Q8IYM9 498 aa17.06■□□□□ 0.32
TUSC3-201ENST00000382020 NCOA7Q8NI08 942 aa17.06■□□□□ 0.32
TUSC3-201ENST00000382020 PLIN2Q99541 437 aa17.06■□□□□ 0.32
TUSC3-201ENST00000382020 PRDM11Q9NQV5 511 aa17.06■□□□□ 0.32
TUSC3-201ENST00000382020 IGKV5-2P06315 115 aa17.06■□□□□ 0.32
TUSC3-201ENST00000382020 SMC1AQ14683 1233 aaKnown RBP17.06■□□□□ 0.32
TUSC3-201ENST00000382020 KBTBD3Q8NAB2 608 aa17.06■□□□□ 0.32
TUSC3-201ENST00000382020 CWC25Q9NXE8 425 aaPredicted RBP17.06■□□□□ 0.32
TUSC3-201ENST00000382020 SLC12A7Q9Y666 1083 aa17.06■□□□□ 0.32
TUSC3-201ENST00000382020 HSPD1P10809 573 aaKnown RBP17.06■□□□□ 0.32
TUSC3-201ENST00000382020 ADORA1P30542 326 aa17.06■□□□□ 0.32
TUSC3-201ENST00000382020 CCT6AP40227 531 aaKnown RBP17.06■□□□□ 0.32
TUSC3-201ENST00000382020 ATP7BP35670 1465 aa17.05■□□□□ 0.32
TUSC3-201ENST00000382020 CBFA2T2O43439 604 aa17.05■□□□□ 0.32
TUSC3-201ENST00000382020 EPB41L2O43491 1005 aaKnown RBP17.05■□□□□ 0.32
TUSC3-201ENST00000382020 ATF3P18847 181 aa17.05■□□□□ 0.32
TUSC3-201ENST00000382020 MATR3P43243 847 aaKnown RBP eCLIP17.05■□□□□ 0.32
TUSC3-201ENST00000382020 IFIT5Q13325 482 aaKnown RBP17.05■□□□□ 0.32
TUSC3-201ENST00000382020 E2F4Q16254 413 aa17.05■□□□□ 0.32
TUSC3-201ENST00000382020 FANCLQ9NW38 375 aa17.05■□□□□ 0.32
TUSC3-201ENST00000382020 KIAA1468Q9P260 1216 aa17.05■□□□□ 0.32
TUSC3-201ENST00000382020 ARHGEF10O15013 1369 aa17.05■□□□□ 0.32
TUSC3-201ENST00000382020 SALL3Q9BXA9 1300 aa17.05■□□□□ 0.32
TUSC3-201ENST00000382020 PFKFB1P16118 471 aa17.05■□□□□ 0.32
TUSC3-201ENST00000382020 STOX1Q6ZVD7 989 aa17.05■□□□□ 0.32
TUSC3-201ENST00000382020 LRRN4CLQ8ND94 238 aa17.05■□□□□ 0.32
TUSC3-201ENST00000382020 SNAP23O00161 211 aa17.05■□□□□ 0.32
TUSC3-201ENST00000382020 USP6P35125 1406 aa17.05■□□□□ 0.32
TUSC3-201ENST00000382020 ZAP70P43403 619 aa17.05■□□□□ 0.32
TUSC3-201ENST00000382020 CPSF1Q10570 1443 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms