RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 OTUD7BQ6GQQ9 843 aa19.03■□□□□ 0.64
NKX3-1-201ENST00000380871 XAGE2Q96GT9 111 aa19.03■□□□□ 0.64
NKX3-1-201ENST00000380871 GOLGA6L19H0YKK7 550 aa19.03■□□□□ 0.64
NKX3-1-201ENST00000380871 CCDC158Q5M9N0 1113 aa19.03■□□□□ 0.64
NKX3-1-201ENST00000380871 DHX32Q7L7V1 743 aaKnown RBP19.03■□□□□ 0.64
NKX3-1-201ENST00000380871 FILIP1Q7Z7B0 1213 aa19.03■□□□□ 0.64
NKX3-1-201ENST00000380871 SLC4A9Q96Q91 983 aa19.03■□□□□ 0.64
NKX3-1-201ENST00000380871 GREM2Q9H772 168 aa19.02■□□□□ 0.64
NKX3-1-201ENST00000380871 LAMA4Q16363 1823 aa19.02■□□□□ 0.64
NKX3-1-201ENST00000380871 IGSF3O75054 1194 aa19.02■□□□□ 0.64
NKX3-1-201ENST00000380871 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.02■□□□□ 0.64
NKX3-1-201ENST00000380871 ISCA1Q9BUE6 129 aa19.02■□□□□ 0.64
NKX3-1-201ENST00000380871 ZAP70P43403 619 aa19.01■□□□□ 0.63
NKX3-1-201ENST00000380871 ME1P48163 572 aa19.01■□□□□ 0.63
NKX3-1-201ENST00000380871 LRRC8AQ8IWT6 810 aa19.01■□□□□ 0.63
NKX3-1-201ENST00000380871 DHX40Q8IX18 779 aaKnown RBP19.01■□□□□ 0.63
NKX3-1-201ENST00000380871 RCOR1Q9UKL0 485 aa19.01■□□□□ 0.63
NKX3-1-201ENST00000380871 AFDNP55196 1824 aaKnown RBP19.01■□□□□ 0.63
NKX3-1-201ENST00000380871 E7EWF7 191 aa19.01■□□□□ 0.63
NKX3-1-201ENST00000380871 M0R2C6 588 aa19■□□□□ 0.63
NKX3-1-201ENST00000380871 ITGA6P23229 1130 aa19■□□□□ 0.63
NKX3-1-201ENST00000380871 STX1AQ16623 288 aa19■□□□□ 0.63
NKX3-1-201ENST00000380871 FSIP1Q8NA03 581 aa19■□□□□ 0.63
NKX3-1-201ENST00000380871 GJB4Q9NTQ9 266 aa19■□□□□ 0.63
NKX3-1-201ENST00000380871 TRMT1Q9NXH9 659 aaKnown RBP19■□□□□ 0.63
NKX3-1-201ENST00000380871 ADAMTS7Q9UKP4 1686 aa19■□□□□ 0.63
NKX3-1-201ENST00000380871 HSPD1P10809 573 aaKnown RBP18.99■□□□□ 0.63
NKX3-1-201ENST00000380871 KCNQ4P56696 695 aa18.99■□□□□ 0.63
NKX3-1-201ENST00000380871 EXOSC10Q01780 885 aaKnown RBP18.99■□□□□ 0.63
NKX3-1-201ENST00000380871 DMTNQ08495 405 aa18.99■□□□□ 0.63
NKX3-1-201ENST00000380871 CCDC73Q6ZRK6 1079 aa18.99■□□□□ 0.63
NKX3-1-201ENST00000380871 OSBP2Q969R2 916 aa18.99■□□□□ 0.63
NKX3-1-201ENST00000380871 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.99■□□□□ 0.63
NKX3-1-201ENST00000380871 V9GYY5 206 aaPredicted RBP18.99■□□□□ 0.63
NKX3-1-201ENST00000380871 SH3TC1Q8TE82 1336 aa18.99■□□□□ 0.63
NKX3-1-201ENST00000380871 SMTNL1A8MU46 457 aa18.99■□□□□ 0.63
NKX3-1-201ENST00000380871 IRS4O14654 1257 aaPredicted RBP18.99■□□□□ 0.63
NKX3-1-201ENST00000380871 PIP4K2BP78356 416 aa18.99■□□□□ 0.63
NKX3-1-201ENST00000380871 NAA16Q6N069 864 aaPredicted RBP18.99■□□□□ 0.63
NKX3-1-201ENST00000380871 AOPEPQ8N6M6 819 aa18.99■□□□□ 0.63
NKX3-1-201ENST00000380871 ENGASEQ8NFI3 743 aa18.99■□□□□ 0.63
NKX3-1-201ENST00000380871 A0A1B0GVL5 298 aa18.99■□□□□ 0.63
NKX3-1-201ENST00000380871 BECN2A8MW95 431 aa18.99■□□□□ 0.63
NKX3-1-201ENST00000380871 RNF113AO15541 343 aaKnown RBP18.99■□□□□ 0.63
NKX3-1-201ENST00000380871 KINO60870 393 aaKnown RBP18.99■□□□□ 0.63
NKX3-1-201ENST00000380871 PDIA3P30101 505 aaKnown RBP18.99■□□□□ 0.63
NKX3-1-201ENST00000380871 STK11IPQ8N1F8 1099 aa18.99■□□□□ 0.63
NKX3-1-201ENST00000380871 MAST3O60307 1309 aa18.99■□□□□ 0.63
NKX3-1-201ENST00000380871 APPP05067 770 aa18.98■□□□□ 0.63
NKX3-1-201ENST00000380871 DZIP3Q86Y13 1208 aaKnown RBP18.98■□□□□ 0.63
NKX3-1-201ENST00000380871 IDH1O75874 414 aaKnown RBP18.98■□□□□ 0.63
NKX3-1-201ENST00000380871 LLPHQ9BRT6 129 aaKnown RBP18.98■□□□□ 0.63
NKX3-1-201ENST00000380871 SALL1Q9NSC2 1324 aa18.98■□□□□ 0.63
NKX3-1-201ENST00000380871 SKILP12757 684 aa18.98■□□□□ 0.63
NKX3-1-201ENST00000380871 FDPSP14324 419 aaKnown RBP18.98■□□□□ 0.63
NKX3-1-201ENST00000380871 NLRP10Q86W26 655 aa18.98■□□□□ 0.63
NKX3-1-201ENST00000380871 CCDC112Q8NEF3 446 aa18.98■□□□□ 0.63
NKX3-1-201ENST00000380871 CEP135Q66GS9 1140 aa18.97■□□□□ 0.63
NKX3-1-201ENST00000380871 GIGYF2Q6Y7W6 1299 aaKnown RBP18.97■□□□□ 0.63
NKX3-1-201ENST00000380871 SMIM5Q71RC9 77 aa18.97■□□□□ 0.63
NKX3-1-201ENST00000380871 MAP3K15Q6ZN16 1313 aa18.97■□□□□ 0.63
NKX3-1-201ENST00000380871 CCDC69A6NI79 296 aa18.97■□□□□ 0.63
NKX3-1-201ENST00000380871 POLR3DP05423 398 aaPredicted RBP18.97■□□□□ 0.63
NKX3-1-201ENST00000380871 FAM160A1Q05DH4 1040 aa18.97■□□□□ 0.63
NKX3-1-201ENST00000380871 SARM1Q6SZW1 724 aa18.97■□□□□ 0.63
NKX3-1-201ENST00000380871 ZBTB38Q8NAP3 1195 aaPredicted RBP18.97■□□□□ 0.63
NKX3-1-201ENST00000380871 PCDHA7Q9UN72 937 aa18.97■□□□□ 0.63
NKX3-1-201ENST00000380871 PCCAP05165 728 aaPredicted RBP18.96■□□□□ 0.63
NKX3-1-201ENST00000380871 CDC25BP30305 580 aa18.96■□□□□ 0.63
NKX3-1-201ENST00000380871 ZMYM1Q5SVZ6 1142 aa18.96■□□□□ 0.63
NKX3-1-201ENST00000380871 TEX13AQ9BXU3 409 aaPredicted RBP18.96■□□□□ 0.63
NKX3-1-201ENST00000380871 CARMIL3Q8ND23 1372 aa18.96■□□□□ 0.63
NKX3-1-201ENST00000380871 RFX7Q2KHR2 1363 aa18.96■□□□□ 0.63
NKX3-1-201ENST00000380871 CYP19A1P11511 503 aaPredicted RBP18.96■□□□□ 0.63
NKX3-1-201ENST00000380871 MRFAP1L1Q96HT8 127 aa18.96■□□□□ 0.63
NKX3-1-201ENST00000380871 MYH15Q9Y2K3 1946 aa18.96■□□□□ 0.62
NKX3-1-201ENST00000380871 ARFGEF2Q9Y6D5 1785 aa18.95■□□□□ 0.62
NKX3-1-201ENST00000380871 PALLDQ8WX93 1383 aa18.95■□□□□ 0.62
NKX3-1-201ENST00000380871 ANKRD18BA2A2Z9 1011 aa18.95■□□□□ 0.62
NKX3-1-201ENST00000380871 HMGB1P09429 215 aaKnown RBP18.95■□□□□ 0.62
NKX3-1-201ENST00000380871 NDUFA8P51970 172 aa18.95■□□□□ 0.62
NKX3-1-201ENST00000380871 CCZ1BP86790 482 aa18.95■□□□□ 0.62
NKX3-1-201ENST00000380871 CCZ1P86791 482 aaPredicted RBP18.95■□□□□ 0.62
NKX3-1-201ENST00000380871 TTLL11Q8NHH1 800 aa18.95■□□□□ 0.62
NKX3-1-201ENST00000380871 CLIC4Q9Y696 253 aa18.95■□□□□ 0.62
NKX3-1-201ENST00000380871 DSCC1Q9BVC3 393 aa18.95■□□□□ 0.62
NKX3-1-201ENST00000380871 AGXT2Q9BYV1 514 aa18.95■□□□□ 0.62
NKX3-1-201ENST00000380871 AKAP2Q9Y2D5 859 aa18.95■□□□□ 0.62
NKX3-1-201ENST00000380871 BIN1O00499 593 aa18.94■□□□□ 0.62
NKX3-1-201ENST00000380871 DPCR1Q3MIW9 517 aa18.94■□□□□ 0.62
NKX3-1-201ENST00000380871 PUS7LQ9H0K6 701 aaKnown RBP18.94■□□□□ 0.62
NKX3-1-201ENST00000380871 LMTK3Q96Q04 1460 aa18.94■□□□□ 0.62
NKX3-1-201ENST00000380871 HELLSQ9NRZ9 838 aa18.94■□□□□ 0.62
NKX3-1-201ENST00000380871 ATP6V1AP38606 617 aa18.94■□□□□ 0.62
NKX3-1-201ENST00000380871 FMR1NBQ8N0W7 255 aaPredicted RBP18.94■□□□□ 0.62
NKX3-1-201ENST00000380871 SDF4Q9BRK5 362 aa18.94■□□□□ 0.62
NKX3-1-201ENST00000380871 IQSEC3Q9UPP2 1182 aaPredicted RBP18.94■□□□□ 0.62
NKX3-1-201ENST00000380871 KCPQ6ZWJ8 1503 aa18.93■□□□□ 0.62
NKX3-1-201ENST00000380871 CTAGE5O15320 804 aa18.93■□□□□ 0.62
NKX3-1-201ENST00000380871 NBPF11Q86T75 865 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms