RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 ERC2O15083 957 aa9.33□□□□□ -0.92
CDKL5-202ENST00000379996 TICAM2Q86XR7 235 aa9.33□□□□□ -0.92
CDKL5-202ENST00000379996 NUTM1Q86Y26 1132 aa9.33□□□□□ -0.92
CDKL5-202ENST00000379996 BSDC1Q9NW68 430 aaPredicted RBP9.33□□□□□ -0.92
CDKL5-202ENST00000379996 CAMK2BQ13554 666 aa9.33□□□□□ -0.92
CDKL5-202ENST00000379996 ZGPATQ8N5A5 531 aaKnown RBP9.33□□□□□ -0.92
CDKL5-202ENST00000379996 PI4K2BQ8TCG2 481 aa9.33□□□□□ -0.92
CDKL5-202ENST00000379996 LRRCC1Q9C099 1032 aa9.33□□□□□ -0.92
CDKL5-202ENST00000379996 GRAPQ13588 217 aa9.33□□□□□ -0.92
CDKL5-202ENST00000379996 C3orf67Q6ZVT6 689 aa9.33□□□□□ -0.92
CDKL5-202ENST00000379996 MICALL2Q8IY33 904 aa9.33□□□□□ -0.92
CDKL5-202ENST00000379996 GRAPLQ8TC17 118 aaPredicted RBP9.33□□□□□ -0.92
CDKL5-202ENST00000379996 GZF1Q9H116 711 aaPredicted RBP9.33□□□□□ -0.92
CDKL5-202ENST00000379996 PALD1Q9ULE6 856 aa9.33□□□□□ -0.92
CDKL5-202ENST00000379996 LAMA4Q16363 1823 aa9.32□□□□□ -0.92
CDKL5-202ENST00000379996 HCLS1P14317 486 aaPredicted RBP9.32□□□□□ -0.92
CDKL5-202ENST00000379996 NPR1P16066 1061 aa9.32□□□□□ -0.92
CDKL5-202ENST00000379996 CHMLP26374 656 aa9.32□□□□□ -0.92
CDKL5-202ENST00000379996 RHPN1Q8TCX5 695 aa9.32□□□□□ -0.92
CDKL5-202ENST00000379996 RBM17Q96I25 401 aaKnown RBP9.32□□□□□ -0.92
CDKL5-202ENST00000379996 CWC22Q9HCG8 908 aaKnown RBP9.32□□□□□ -0.92
CDKL5-202ENST00000379996 ZNF646O15015 1829 aaPredicted RBP9.32□□□□□ -0.92
CDKL5-202ENST00000379996 TAF1P21675 1872 aa9.32□□□□□ -0.92
CDKL5-202ENST00000379996 DOCK2Q92608 1830 aa9.32□□□□□ -0.92
CDKL5-202ENST00000379996 SASH1O94885 1247 aa9.32□□□□□ -0.92
CDKL5-202ENST00000379996 SRGNP10124 158 aa9.32□□□□□ -0.92
CDKL5-202ENST00000379996 MDM2Q00987 491 aaPredicted RBP9.32□□□□□ -0.92
CDKL5-202ENST00000379996 GRIPAP1Q4V328 841 aa9.32□□□□□ -0.92
CDKL5-202ENST00000379996 BICDL1Q6ZP65 573 aa9.32□□□□□ -0.92
CDKL5-202ENST00000379996 GPT2Q8TD30 523 aa9.32□□□□□ -0.92
CDKL5-202ENST00000379996 ZNF512BQ96KM6 892 aaPredicted RBP9.32□□□□□ -0.92
CDKL5-202ENST00000379996 PTGER2P43116 358 aa9.31□□□□□ -0.92
CDKL5-202ENST00000379996 ANAPC15P60006 121 aa9.31□□□□□ -0.92
CDKL5-202ENST00000379996 TGFB2P61812 414 aa9.31□□□□□ -0.92
CDKL5-202ENST00000379996 C15orf52Q6ZUT6 534 aaKnown RBP9.31□□□□□ -0.92
CDKL5-202ENST00000379996 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.31□□□□□ -0.92
CDKL5-202ENST00000379996 RPAP1Q9BWH6 1393 aaPredicted RBP9.31□□□□□ -0.92
CDKL5-202ENST00000379996 CACNA1SQ13698 1873 aa9.31□□□□□ -0.92
CDKL5-202ENST00000379996 SURF6O75683 361 aaKnown RBP9.31□□□□□ -0.92
CDKL5-202ENST00000379996 BBOX1O75936 387 aa9.31□□□□□ -0.92
CDKL5-202ENST00000379996 MX1P20591 662 aa9.31□□□□□ -0.92
CDKL5-202ENST00000379996 G3BP1Q13283 466 aaKnown RBP eCLIP9.31□□□□□ -0.92
CDKL5-202ENST00000379996 JARID2Q92833 1246 aaPredicted RBP9.31□□□□□ -0.92
CDKL5-202ENST00000379996 FGFR2P21802 821 aa9.31□□□□□ -0.92
CDKL5-202ENST00000379996 CSPP1Q1MSJ5 1256 aa9.31□□□□□ -0.92
CDKL5-202ENST00000379996 MASTLQ96GX5 879 aa9.31□□□□□ -0.92
CDKL5-202ENST00000379996 EXOC6BQ9Y2D4 811 aa9.31□□□□□ -0.92
CDKL5-202ENST00000379996 CD2APQ9Y5K6 639 aa9.31□□□□□ -0.92
CDKL5-202ENST00000379996 TTC41PQ6P2S7 1318 aa9.31□□□□□ -0.92
CDKL5-202ENST00000379996 IRS2Q9Y4H2 1338 aa9.31□□□□□ -0.92
CDKL5-202ENST00000379996 PSME4Q14997 1843 aa9.31□□□□□ -0.92
CDKL5-202ENST00000379996 REC8O95072 547 aa9.3□□□□□ -0.92
CDKL5-202ENST00000379996 MAST2Q6P0Q8 1798 aa9.3□□□□□ -0.92
CDKL5-202ENST00000379996 IGSF3O75054 1194 aa9.3□□□□□ -0.92
CDKL5-202ENST00000379996 GTF2E1P29083 439 aaPredicted RBP9.3□□□□□ -0.92
CDKL5-202ENST00000379996 ALDH1B1P30837 517 aa9.3□□□□□ -0.92
CDKL5-202ENST00000379996 IGHMBP2P38935 993 aaKnown RBP9.3□□□□□ -0.92
CDKL5-202ENST00000379996 NUCB2P80303 420 aa9.3□□□□□ -0.92
CDKL5-202ENST00000379996 TSHZ3Q63HK5 1081 aa9.3□□□□□ -0.92
CDKL5-202ENST00000379996 ANKRD18AQ8IVF6 992 aa9.3□□□□□ -0.92
CDKL5-202ENST00000379996 AKAP2Q9Y2D5 859 aa9.3□□□□□ -0.92
CDKL5-202ENST00000379996 FER1L6Q2WGJ9 1857 aa9.3□□□□□ -0.92
CDKL5-202ENST00000379996 BRD1O95696 1058 aa9.3□□□□□ -0.92
CDKL5-202ENST00000379996 POLD1P28340 1107 aa9.3□□□□□ -0.92
CDKL5-202ENST00000379996 DDX46Q7L014 1031 aaKnown RBP9.3□□□□□ -0.92
CDKL5-202ENST00000379996 PDLIM2Q96JY6 352 aa9.3□□□□□ -0.92
CDKL5-202ENST00000379996 PDGFDQ9GZP0 370 aaPredicted RBP9.3□□□□□ -0.92
CDKL5-202ENST00000379996 ANKRD2Q9GZV1 360 aa9.3□□□□□ -0.92
CDKL5-202ENST00000379996 IRF6O14896 467 aa9.29□□□□□ -0.92
CDKL5-202ENST00000379996 R3HDM1Q15032 1099 aaKnown RBP9.29□□□□□ -0.92
CDKL5-202ENST00000379996 KCNB2Q92953 911 aa9.29□□□□□ -0.92
CDKL5-202ENST00000379996 PA2G4Q9UQ80 394 aaKnown RBP9.29□□□□□ -0.92
CDKL5-202ENST00000379996 SLX4Q8IY92 1834 aa9.29□□□□□ -0.92
CDKL5-202ENST00000379996 RFX7Q2KHR2 1363 aa9.29□□□□□ -0.92
CDKL5-202ENST00000379996 PDS5AQ29RF7 1337 aaKnown RBP9.29□□□□□ -0.92
CDKL5-202ENST00000379996 AKAP11Q9UKA4 1901 aa9.29□□□□□ -0.92
CDKL5-202ENST00000379996 HSPA4P34932 840 aa9.29□□□□□ -0.92
CDKL5-202ENST00000379996 RPS8P62241 208 aaKnown RBP9.29□□□□□ -0.92
CDKL5-202ENST00000379996 TNNI3KQ59H18 835 aa9.29□□□□□ -0.92
CDKL5-202ENST00000379996 SP8Q8IXZ3 490 aa9.29□□□□□ -0.92
CDKL5-202ENST00000379996 PROCA1Q8NCQ7 364 aaPredicted RBP9.29□□□□□ -0.92
CDKL5-202ENST00000379996 TTC14Q96N46 770 aa9.29□□□□□ -0.92
CDKL5-202ENST00000379996 FPGT-TNNI3KV9GXZ4 949 aa9.29□□□□□ -0.92
CDKL5-202ENST00000379996 MYH13Q9UKX3 1938 aa9.29□□□□□ -0.92
CDKL5-202ENST00000379996 PDE8BO95263 885 aa9.28□□□□□ -0.92
CDKL5-202ENST00000379996 RPGRQ92834 1020 aaKnown RBP9.28□□□□□ -0.92
CDKL5-202ENST00000379996 INTS4Q96HW7 963 aaKnown RBP9.28□□□□□ -0.92
CDKL5-202ENST00000379996 TMX3Q96JJ7 454 aa9.28□□□□□ -0.92
CDKL5-202ENST00000379996 CARNS1A5YM72 827 aa9.28□□□□□ -0.92
CDKL5-202ENST00000379996 ZSCAN23Q3MJ62 389 aa9.28□□□□□ -0.92
CDKL5-202ENST00000379996 CC2D2BQ6DHV5 1058 aa9.28□□□□□ -0.92
CDKL5-202ENST00000379996 CLASRPQ8N2M8 674 aaKnown RBP9.28□□□□□ -0.92
CDKL5-202ENST00000379996 PHOX2BQ99453 314 aa9.28□□□□□ -0.92
CDKL5-202ENST00000379996 SEC31BQ9NQW1 1179 aa9.28□□□□□ -0.92
CDKL5-202ENST00000379996 SNRKQ9NRH2 765 aa9.28□□□□□ -0.92
CDKL5-202ENST00000379996 BMP2KQ9NSY1 1161 aaPredicted RBP9.28□□□□□ -0.92
CDKL5-202ENST00000379996 UBE4AQ14139 1066 aa9.28□□□□□ -0.92
CDKL5-202ENST00000379996 PUM3Q15397 648 aaKnown RBP9.28□□□□□ -0.92
CDKL5-202ENST00000379996 LRRC24Q50LG9 513 aa9.28□□□□□ -0.92
CDKL5-202ENST00000379996 LDHAL6AQ6ZMR3 332 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms